RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 NUPR1O60356 82 aa10.92□□□□□ -0.66
TOP3A-202ENST00000461127 HBDP02042 147 aa10.92□□□□□ -0.66
TOP3A-202ENST00000461127 ESDP10768 282 aa10.92□□□□□ -0.66
TOP3A-202ENST00000461127 SNRPEP62304 92 aaKnown RBP10.92□□□□□ -0.66
TOP3A-202ENST00000461127 ODF1Q14990 250 aa10.92□□□□□ -0.66
TOP3A-202ENST00000461127 PDZD11Q5EBL8 140 aa10.92□□□□□ -0.66
TOP3A-202ENST00000461127 FAM19A2Q8N3H0 131 aa10.92□□□□□ -0.66
TOP3A-202ENST00000461127 CHCHD5Q9BSY4 110 aa10.92□□□□□ -0.66
TOP3A-202ENST00000461127 CYSLTR1Q9Y271 337 aa10.92□□□□□ -0.66
TOP3A-202ENST00000461127 A0A087WYN8 130 aa10.91□□□□□ -0.66
TOP3A-202ENST00000461127 S100A2P29034 98 aa10.91□□□□□ -0.66
TOP3A-202ENST00000461127 PKIAP61925 76 aa10.91□□□□□ -0.66
TOP3A-202ENST00000461127 C2orf66Q6UXQ4 117 aa10.91□□□□□ -0.66
TOP3A-202ENST00000461127 C20orf203Q8NBC4 194 aa10.91□□□□□ -0.66
TOP3A-202ENST00000461127 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-202ENST00000461127 A0A0J9YXV3 536 aa10.9□□□□□ -0.66
TOP3A-202ENST00000461127 IGKV2-29A2NJV5 120 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-202ENST00000461127 SMAGPQ0VAQ4 97 aa10.9□□□□□ -0.66
TOP3A-202ENST00000461127 IGHV3-64A0A075B6Q5 118 aa10.89□□□□□ -0.67
TOP3A-202ENST00000461127 C5orf52A6NGY3 159 aa10.89□□□□□ -0.67
TOP3A-202ENST00000461127 LINC01549A6NIU2 74 aa10.89□□□□□ -0.67
TOP3A-202ENST00000461127 CNBPP62633 177 aaKnown RBP10.89□□□□□ -0.67
TOP3A-202ENST00000461127 MPV17L2Q567V2 206 aa10.89□□□□□ -0.67
TOP3A-202ENST00000461127 AMMECR1LQ6DCA0 310 aa10.89□□□□□ -0.67
TOP3A-202ENST00000461127 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-202ENST00000461127 H7C423 109 aa10.88□□□□□ -0.67
TOP3A-202ENST00000461127 RPL39P62891 51 aaKnown RBP10.88□□□□□ -0.67
TOP3A-202ENST00000461127 GAGE6Q13070 117 aa10.88□□□□□ -0.67
TOP3A-202ENST00000461127 HIST3H2BBQ8N257 126 aa10.88□□□□□ -0.67
TOP3A-202ENST00000461127 TOMM6Q96B49 74 aa10.88□□□□□ -0.67
TOP3A-202ENST00000461127 SCGB3A1Q96QR1 104 aa10.88□□□□□ -0.67
TOP3A-202ENST00000461127 REG3GQ6UW15 175 aa10.87□□□□□ -0.67
TOP3A-202ENST00000461127 SPACA4Q8TDM5 124 aa10.87□□□□□ -0.67
TOP3A-202ENST00000461127 A0A096LNJ9 63 aa10.86□□□□□ -0.67
TOP3A-202ENST00000461127 hDV102S1A0JD36 115 aa10.86□□□□□ -0.67
TOP3A-202ENST00000461127 LEPROTL1O95214 131 aa10.86□□□□□ -0.67
TOP3A-202ENST00000461127 CHTF8P0CG12 524 aa10.86□□□□□ -0.67
TOP3A-202ENST00000461127 FGF6P10767 208 aa10.86□□□□□ -0.67
TOP3A-202ENST00000461127 FABP4P15090 132 aa10.86□□□□□ -0.67
TOP3A-202ENST00000461127 TMEM101Q96IK0 257 aa10.86□□□□□ -0.67
TOP3A-202ENST00000461127 SPANXA1Q9NS26 97 aa10.86□□□□□ -0.67
TOP3A-202ENST00000461127 PLAC8Q9NZF1 115 aa10.86□□□□□ -0.67
TOP3A-202ENST00000461127 KRTAP10-8P60410 259 aa10.85□□□□□ -0.67
TOP3A-202ENST00000461127 KRTAP9-2Q9BYQ4 174 aa10.85□□□□□ -0.67
TOP3A-202ENST00000461127 HSPB8Q9UJY1 196 aa10.85□□□□□ -0.67
TOP3A-202ENST00000461127 ATP5LO75964 103 aa10.84□□□□□ -0.67
TOP3A-202ENST00000461127 CLPSL2Q6UWE3 100 aa10.84□□□□□ -0.67
TOP3A-202ENST00000461127 ERASQ7Z444 233 aa10.84□□□□□ -0.67
TOP3A-202ENST00000461127 MRPL52Q86TS9 123 aaKnown RBP10.84□□□□□ -0.67
TOP3A-202ENST00000461127 OR5A1Q8NGJ0 315 aa10.84□□□□□ -0.67
TOP3A-202ENST00000461127 TMEM141Q96I45 108 aa10.84□□□□□ -0.67
TOP3A-202ENST00000461127 TIMM21Q9BVV7 248 aa10.84□□□□□ -0.67
TOP3A-202ENST00000461127 PRR34Q9NV39 138 aa10.84□□□□□ -0.67
TOP3A-202ENST00000461127 UBE2D4Q9Y2X8 147 aa10.84□□□□□ -0.67
TOP3A-202ENST00000461127 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-202ENST00000461127 ZNF25P17030 456 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-202ENST00000461127 PRR3P79522 188 aaKnown RBP10.83□□□□□ -0.68
TOP3A-202ENST00000461127 PACRGQ96M98 296 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-202ENST00000461127 TIMM17AQ99595 171 aa10.83□□□□□ -0.68
TOP3A-202ENST00000461127 HIST1H2BLQ99880 126 aa10.83□□□□□ -0.68
TOP3A-202ENST00000461127 PYGO1Q9Y3Y4 419 aa10.83□□□□□ -0.68
TOP3A-202ENST00000461127 PAPPA-AS1Q5QFB9 102 aa10.82□□□□□ -0.68
TOP3A-202ENST00000461127 KRTAP26-1Q6PEX3 210 aa10.82□□□□□ -0.68
TOP3A-202ENST00000461127 LINC00269Q8N2A0 174 aa10.82□□□□□ -0.68
TOP3A-202ENST00000461127 IGIPA6NJ69 53 aa10.81□□□□□ -0.68
TOP3A-202ENST00000461127 RBX1P62877 108 aa10.81□□□□□ -0.68
TOP3A-202ENST00000461127 SPINK6Q6UWN8 80 aa10.81□□□□□ -0.68
TOP3A-202ENST00000461127 Q6ZN92 141 aa10.81□□□□□ -0.68
TOP3A-202ENST00000461127 IFI27L1Q96BM0 104 aa10.81□□□□□ -0.68
TOP3A-202ENST00000461127 NPSP0C0P6 89 aa10.8□□□□□ -0.68
TOP3A-202ENST00000461127 LINC00173Q6ZV60 143 aa10.8□□□□□ -0.68
TOP3A-202ENST00000461127 MAP1LC3CQ9BXW4 147 aa10.8□□□□□ -0.68
TOP3A-202ENST00000461127 CSDC2Q9Y534 153 aaKnown RBP10.8□□□□□ -0.68
TOP3A-202ENST00000461127 IGLV4-3A0A075B6K6 122 aa10.79□□□□□ -0.68
TOP3A-202ENST00000461127 A0A1B0GUV1 79 aa10.79□□□□□ -0.68
TOP3A-202ENST00000461127 MRPS36P82909 103 aaKnown RBP10.79□□□□□ -0.68
TOP3A-202ENST00000461127 Q6ZUT4 128 aa10.79□□□□□ -0.68
TOP3A-202ENST00000461127 ZNF664Q8N3J9 261 aa10.79□□□□□ -0.68
TOP3A-202ENST00000461127 OPRPNQ99935 248 aaPredicted RBP10.79□□□□□ -0.68
TOP3A-202ENST00000461127 IGLV10-54A0A075B6I4 117 aa10.78□□□□□ -0.68
TOP3A-202ENST00000461127 IFITM10A6NMD0 228 aa10.78□□□□□ -0.68
TOP3A-202ENST00000461127 VCX2Q9H322 139 aa10.78□□□□□ -0.68
TOP3A-202ENST00000461127 IGLV4-60A0A075B6I1 120 aa10.77□□□□□ -0.69
TOP3A-202ENST00000461127 TRAV8-4A0A0B4J246 113 aa10.77□□□□□ -0.69
TOP3A-202ENST00000461127 H0Y8G0 127 aa10.77□□□□□ -0.69
TOP3A-202ENST00000461127 KRTDAPP60985 99 aa10.77□□□□□ -0.69
TOP3A-202ENST00000461127 REG3AQ06141 175 aa10.77□□□□□ -0.69
TOP3A-202ENST00000461127 MAJINQ3KP22 176 aa10.77□□□□□ -0.69
TOP3A-202ENST00000461127 RNASE13Q5GAN3 156 aaKnown RBP10.77□□□□□ -0.69
TOP3A-202ENST00000461127 TEX43Q6ZNM6 134 aa10.77□□□□□ -0.69
TOP3A-202ENST00000461127 C2orf88Q9BSF0 95 aa10.77□□□□□ -0.69
TOP3A-202ENST00000461127 CDC42SE2Q9NRR3 84 aa10.77□□□□□ -0.69
TOP3A-202ENST00000461127 SLPIP03973 132 aa10.76□□□□□ -0.69
TOP3A-202ENST00000461127 A0A0U1RQV1 116 aa10.75□□□□□ -0.69
TOP3A-202ENST00000461127 COX6A2Q02221 97 aa10.75□□□□□ -0.69
TOP3A-202ENST00000461127 PMVKQ15126 192 aa10.75□□□□□ -0.69
TOP3A-202ENST00000461127 OR10D4PQ8NGN7 298 aa10.75□□□□□ -0.69
TOP3A-202ENST00000461127 LPAP08519 4548 aa10.75□□□□□ -0.69
TOP3A-202ENST00000461127 IGKV2-24A0A0C4DH68 120 aa10.74□□□□□ -0.69
TOP3A-202ENST00000461127 IGKV3OR2-268A0A0C4DH90 116 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms