RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 ZNF664Q8N3J9 261 aa2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 TMEM101Q96IK0 257 aa2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 BTF3L4Q96K17 158 aa2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 LINC01600Q96MT4 127 aa2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 EIF5A2Q9GZV4 153 aaKnown RBP2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 CDC42SE2Q9NRR3 84 aa2.91□□□□□ -1.94
GTF3C3-208ENST00000455546 IGLV4-69A0A075B6H9 119 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 IGHV1-58A0A0C4DH39 117 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 A0A0J9YXV3 536 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 A0A1B0GUT8 65 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 A0A1W2PNN7 141 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 A4D1N5 150 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 ZNF727A8MUV8 499 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 TMEM250H0YL14 139 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 ZNF25P17030 456 aaPredicted RBP2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 SYCNQ0VAF6 134 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 SRSF9Q13242 221 aaKnown RBP eCLIP2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 CD164L2Q6UWJ8 174 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 C5orf38Q86SI9 138 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 LINC01551Q86U37 167 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 NUP35Q8NFH5 326 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 TSKUQ8WUA8 353 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 BORCS7Q96B45 105 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 MRAP2Q96G30 205 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 CARD19Q96LW7 228 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 OPRPNQ99935 248 aaPredicted RBP2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 SMIM7Q9BQ49 75 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 TMEM191AQ9H0A3 160 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 UBR4Q5T4S7 5183 aa2.9□□□□□ -1.95
GTF3C3-208ENST00000455546 IGLV9-49A0A0B4J1Y8 123 aa2.89□□□□□ -1.95
GTF3C3-208ENST00000455546 TRAV13-1A0A0B4J241 112 aa2.89□□□□□ -1.95
GTF3C3-208ENST00000455546 TRBV27A0A0K0K1C4 114 aa2.89□□□□□ -1.95
GTF3C3-208ENST00000455546 C7orf77A4D0Y5 90 aa2.89□□□□□ -1.95
GTF3C3-208ENST00000455546 SRP19P09132 144 aaKnown RBP2.89□□□□□ -1.95
GTF3C3-208ENST00000455546 FCER1GP30273 86 aa2.89□□□□□ -1.95
GTF3C3-208ENST00000455546 KRTAP10-8P60410 259 aa2.89□□□□□ -1.95
GTF3C3-208ENST00000455546 MRPL51Q4U2R6 128 aaKnown RBP2.89□□□□□ -1.95
GTF3C3-208ENST00000455546 SPINK6Q6UWN8 80 aa2.89□□□□□ -1.95
GTF3C3-208ENST00000455546 AKAP14Q86UN6 197 aa2.89□□□□□ -1.95
GTF3C3-208ENST00000455546 OSTCQ9NRP0 149 aa2.89□□□□□ -1.95
GTF3C3-208ENST00000455546 UBE2D4Q9Y2X8 147 aa2.89□□□□□ -1.95
GTF3C3-208ENST00000455546 V9GYV3 84 aa2.89□□□□□ -1.95
GTF3C3-208ENST00000455546 TNXBP22105 4242 aa2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 HMCN2Q8NDA2 5059 aa2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 LOC107984640A0A0U1RRK4 108 aa2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 C1orf196B1AJZ1 125 aa2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 C9JQL5 133 aa2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 COX7A2LO14548 114 aa2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 RPL39P62891 51 aaKnown RBP2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 RIGQ13278 110 aa2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 TMEM241Q24JQ0 296 aa2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 C9orf116Q5BN46 136 aaPredicted RBP2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 Q6ZRP5 223 aa2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 PHF5AQ7RTV0 110 aaKnown RBP2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 MRPL52Q86TS9 123 aaKnown RBP2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 FAM104AQ969W3 186 aa2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 FAM210AQ96ND0 272 aa2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 CAMK2N2Q96S95 79 aa2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 LINC00474Q9P2X8 69 aa2.88□□□□□ -1.95
GTF3C3-208ENST00000455546 FAM168BA1KXE4 195 aa2.87□□□□□ -1.95
GTF3C3-208ENST00000455546 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.87□□□□□ -1.95
GTF3C3-208ENST00000455546 TCAPO15273 167 aa2.87□□□□□ -1.95
GTF3C3-208ENST00000455546 RPL23P62829 140 aaKnown RBP2.87□□□□□ -1.95
GTF3C3-208ENST00000455546 RPL18AQ02543 176 aaKnown RBP2.87□□□□□ -1.95
GTF3C3-208ENST00000455546 FAM104BQ5XKR9 115 aa2.87□□□□□ -1.95
GTF3C3-208ENST00000455546 REG3GQ6UW15 175 aa2.87□□□□□ -1.95
GTF3C3-208ENST00000455546 Q6ZUT4 128 aa2.87□□□□□ -1.95
GTF3C3-208ENST00000455546 KRTAP11-1Q8IUC1 163 aa2.87□□□□□ -1.95
GTF3C3-208ENST00000455546 ISOC2Q96AB3 205 aa2.87□□□□□ -1.95
GTF3C3-208ENST00000455546 KIR2DL4Q99706 377 aa2.87□□□□□ -1.95
GTF3C3-208ENST00000455546 NAT8BQ9UHF3 227 aa2.87□□□□□ -1.95
GTF3C3-208ENST00000455546 PSORS1C2Q9UIG4 136 aa2.87□□□□□ -1.95
GTF3C3-208ENST00000455546 CSDC2Q9Y534 153 aaKnown RBP2.87□□□□□ -1.95
GTF3C3-208ENST00000455546 A0A1B0GVG6 124 aa2.86□□□□□ -1.95
GTF3C3-208ENST00000455546 SMIM27A0A1W2PRY6 76 aa2.86□□□□□ -1.95
GTF3C3-208ENST00000455546 SMIM1B2RUZ4 78 aa2.86□□□□□ -1.95
GTF3C3-208ENST00000455546 APOMO95445 188 aa2.86□□□□□ -1.95
GTF3C3-208ENST00000455546 MT-ND6P03923 174 aa2.86□□□□□ -1.95
GTF3C3-208ENST00000455546 CKS2P33552 79 aa2.86□□□□□ -1.95
GTF3C3-208ENST00000455546 SPAG11BQ08648 103 aa2.86□□□□□ -1.95
GTF3C3-208ENST00000455546 ADIRFQ15847 76 aa2.86□□□□□ -1.95
GTF3C3-208ENST00000455546 FAM74A3Q4VXF1 159 aa2.86□□□□□ -1.95
GTF3C3-208ENST00000455546 C1orf137Q5JT78 98 aa2.86□□□□□ -1.95
GTF3C3-208ENST00000455546 LCE1AQ5T7P2 110 aa2.86□□□□□ -1.95
GTF3C3-208ENST00000455546 MRPL54Q6P161 138 aaKnown RBP2.86□□□□□ -1.95
GTF3C3-208ENST00000455546 UNQ6190/PRO20217Q6UXQ8 127 aa2.86□□□□□ -1.95
GTF3C3-208ENST00000455546 ORAOV1Q8WV07 137 aa2.86□□□□□ -1.95
GTF3C3-208ENST00000455546 TRBV24-1A0A075B6N3 115 aa2.85□□□□□ -1.95
GTF3C3-208ENST00000455546 A0A087WZ39 114 aa2.85□□□□□ -1.95
GTF3C3-208ENST00000455546 IGHV3OR16-9A0A0B4J2B5 98 aa2.85□□□□□ -1.95
GTF3C3-208ENST00000455546 LINC00862A6NCI5 91 aa2.85□□□□□ -1.95
GTF3C3-208ENST00000455546 C5orf52A6NGY3 159 aa2.85□□□□□ -1.95
GTF3C3-208ENST00000455546 D6R8Y8 96 aa2.85□□□□□ -1.95
GTF3C3-208ENST00000455546 PPP1R17O96001 155 aa2.85□□□□□ -1.95
GTF3C3-208ENST00000455546 NPYP01303 97 aa2.85□□□□□ -1.95
GTF3C3-208ENST00000455546 ZC2HC1BQ5TFG8 222 aa2.85□□□□□ -1.95
GTF3C3-208ENST00000455546 KRTAP7-1Q8IUC3 87 aa2.85□□□□□ -1.95
GTF3C3-208ENST00000455546 PRAC1Q96KF2 57 aa2.85□□□□□ -1.95
GTF3C3-208ENST00000455546 C2orf48Q96LS8 159 aa2.85□□□□□ -1.95
GTF3C3-208ENST00000455546 C20orf78Q9BR46 151 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms