RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 NANOS2P60321 138 aaKnown RBP8.57□□□□□ -1.04
PTCH1-209ENST00000437951 C2CD3Q4AC94 2353 aa8.57□□□□□ -1.04
PTCH1-209ENST00000437951 E7EUB6 86 aa8.57□□□□□ -1.04
PTCH1-209ENST00000437951 F8WDY8 70 aa8.57□□□□□ -1.04
PTCH1-209ENST00000437951 Q8N3U1 123 aa8.57□□□□□ -1.04
PTCH1-209ENST00000437951 PLAC8L1A1L4L8 177 aa8.56□□□□□ -1.04
PTCH1-209ENST00000437951 LY6LH3BQJ8 138 aa8.56□□□□□ -1.04
PTCH1-209ENST00000437951 K7EQG2 157 aa8.56□□□□□ -1.04
PTCH1-209ENST00000437951 UNQ9165/PRO28630Q6UXU0 137 aa8.56□□□□□ -1.04
PTCH1-209ENST00000437951 Q6ZTI0 123 aa8.56□□□□□ -1.04
PTCH1-209ENST00000437951 SPAG11AQ6PDA7 123 aa8.56□□□□□ -1.04
PTCH1-209ENST00000437951 LINC01548A6NM66 108 aa8.55□□□□□ -1.04
PTCH1-209ENST00000437951 IGF1P05019 195 aa8.55□□□□□ -1.04
PTCH1-209ENST00000437951 ZFP36P26651 326 aaKnown RBP8.55□□□□□ -1.04
PTCH1-209ENST00000437951 H0Y9P7 68 aa8.54□□□□□ -1.04
PTCH1-209ENST00000437951 IGFL2Q6UWQ7 119 aa8.54□□□□□ -1.04
PTCH1-209ENST00000437951 Q8N6K4 173 aa8.54□□□□□ -1.04
PTCH1-209ENST00000437951 A6NDX4 124 aa8.54□□□□□ -1.04
PTCH1-209ENST00000437951 CRIP1P50238 77 aa8.54□□□□□ -1.04
PTCH1-209ENST00000437951 DCANP1Q8TF63 244 aa8.54□□□□□ -1.04
PTCH1-209ENST00000437951 FN1P02751 2386 aaKnown RBP8.53□□□□□ -1.04
PTCH1-209ENST00000437951 IGLV2-11P01706 119 aa8.53□□□□□ -1.04
PTCH1-209ENST00000437951 LY6G6EA0A0G2JKS1 128 aa8.53□□□□□ -1.04
PTCH1-209ENST00000437951 ODF3BA8MYP8 253 aa8.53□□□□□ -1.04
PTCH1-209ENST00000437951 U3KQA8 63 aa8.53□□□□□ -1.04
PTCH1-209ENST00000437951 POLR2KP53803 58 aaKnown RBP8.53□□□□□ -1.04
PTCH1-209ENST00000437951 Q8N7P7 452 aa8.53□□□□□ -1.04
PTCH1-209ENST00000437951 XAGE1AQ9HD64 81 aa8.53□□□□□ -1.04
PTCH1-209ENST00000437951 F8P00451 2351 aa8.52□□□□□ -1.04
PTCH1-209ENST00000437951 C1orf137Q5JT78 98 aa8.52□□□□□ -1.04
PTCH1-209ENST00000437951 SPRNQ5BIV9 151 aa8.52□□□□□ -1.05
PTCH1-209ENST00000437951 PLA2G2CQ5R387 149 aa8.52□□□□□ -1.05
PTCH1-209ENST00000437951 Q6ZS46 218 aa8.52□□□□□ -1.05
PTCH1-209ENST00000437951 IGHV4-61A0A0C4DH41 118 aa8.52□□□□□ -1.05
PTCH1-209ENST00000437951 IGF2-ASQ6U949 168 aa8.52□□□□□ -1.05
PTCH1-209ENST00000437951 A0A096LNI7 61 aa8.52□□□□□ -1.05
PTCH1-209ENST00000437951 DEFB4AO15263 64 aa8.52□□□□□ -1.05
PTCH1-209ENST00000437951 C8orf87E5RJ46 101 aa8.51□□□□□ -1.05
PTCH1-209ENST00000437951 LELP1Q5T871 98 aa8.51□□□□□ -1.05
PTCH1-209ENST00000437951 IGKV2-28A0A075B6P5 120 aa8.51□□□□□ -1.05
PTCH1-209ENST00000437951 HCG22E2RYF7 251 aa8.51□□□□□ -1.05
PTCH1-209ENST00000437951 IGKV2D-28P01615 120 aa8.51□□□□□ -1.05
PTCH1-209ENST00000437951 PPDPFQ9H3Y8 114 aa8.51□□□□□ -1.05
PTCH1-209ENST00000437951 COL4A6Q14031 1691 aa8.51□□□□□ -1.05
PTCH1-209ENST00000437951 DAZAP2Q15038 168 aaPredicted RBP8.5□□□□□ -1.05
PTCH1-209ENST00000437951 PIP4P1Q86T03 277 aa8.5□□□□□ -1.05
PTCH1-209ENST00000437951 LINC00959A0A1B0GUT2 108 aa8.5□□□□□ -1.05
PTCH1-209ENST00000437951 A0A1B0GW54 56 aa8.5□□□□□ -1.05
PTCH1-209ENST00000437951 IGHV4-30-4P0DP06 118 aa8.5□□□□□ -1.05
PTCH1-209ENST00000437951 IGHV4-31P0DP07 118 aa8.5□□□□□ -1.05
PTCH1-209ENST00000437951 DEFB131BA0A096LNP1 70 aa8.5□□□□□ -1.05
PTCH1-209ENST00000437951 LINC01547P58512 204 aaPredicted RBP8.5□□□□□ -1.05
PTCH1-209ENST00000437951 ZNF295-AS1Q8N0V1 137 aa8.5□□□□□ -1.05
PTCH1-209ENST00000437951 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.5□□□□□ -1.05
PTCH1-209ENST00000437951 IGIPA6NJ69 53 aa8.49□□□□□ -1.05
PTCH1-209ENST00000437951 SPINK6Q6UWN8 80 aa8.49□□□□□ -1.05
PTCH1-209ENST00000437951 TNFRSF13BO14836 293 aaPredicted RBP8.49□□□□□ -1.05
PTCH1-209ENST00000437951 SHISA2Q6UWI4 295 aa8.49□□□□□ -1.05
PTCH1-209ENST00000437951 TP53AIP1Q9HCN2 124 aa8.49□□□□□ -1.05
PTCH1-209ENST00000437951 H3BPC8 53 aa8.48□□□□□ -1.05
PTCH1-209ENST00000437951 DEFB114Q30KQ6 69 aa8.48□□□□□ -1.05
PTCH1-209ENST00000437951 KLLNB2CW77 178 aa8.48□□□□□ -1.05
PTCH1-209ENST00000437951 BEAN1Q3B7T3 259 aa8.48□□□□□ -1.05
PTCH1-209ENST00000437951 DNAJC9-AS1A6NH13 148 aa8.47□□□□□ -1.05
PTCH1-209ENST00000437951 POM121L12Q8N7R1 296 aa8.47□□□□□ -1.05
PTCH1-209ENST00000437951 A0A087WVE0 104 aa8.47□□□□□ -1.05
PTCH1-209ENST00000437951 WDR87Q6ZQQ6 2873 aa8.47□□□□□ -1.05
PTCH1-209ENST00000437951 CDC42SE2Q9NRR3 84 aa8.47□□□□□ -1.05
PTCH1-209ENST00000437951 TLN2Q9Y4G6 2542 aa8.47□□□□□ -1.05
PTCH1-209ENST00000437951 RNASE3P12724 160 aaKnown RBP8.47□□□□□ -1.05
PTCH1-209ENST00000437951 DEFB1P60022 68 aa8.47□□□□□ -1.05
PTCH1-209ENST00000437951 LINC01561Q8N1V8 128 aa8.47□□□□□ -1.05
PTCH1-209ENST00000437951 EGFEM1PQ0D2K5 195 aa8.46□□□□□ -1.05
PTCH1-209ENST00000437951 A0A1B0GU69 56 aa8.46□□□□□ -1.06
PTCH1-209ENST00000437951 REG3GQ6UW15 175 aa8.46□□□□□ -1.06
PTCH1-209ENST00000437951 CHCHD7Q9BUK0 85 aa8.46□□□□□ -1.06
PTCH1-209ENST00000437951 FSHBP01225 129 aa8.45□□□□□ -1.06
PTCH1-209ENST00000437951 A0A087WYN8 130 aa8.45□□□□□ -1.06
PTCH1-209ENST00000437951 LY6G6CO95867 125 aa8.45□□□□□ -1.06
PTCH1-209ENST00000437951 LINC00575Q6W349 94 aa8.45□□□□□ -1.06
PTCH1-209ENST00000437951 ACYP2P14621 99 aa8.44□□□□□ -1.06
PTCH1-209ENST00000437951 FBXL19-AS1Q494R0 122 aa8.44□□□□□ -1.06
PTCH1-209ENST00000437951 CDIP1Q9H305 208 aa8.44□□□□□ -1.06
PTCH1-209ENST00000437951 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.43□□□□□ -1.06
PTCH1-209ENST00000437951 IGLV9-49A0A0B4J1Y8 123 aa8.43□□□□□ -1.06
PTCH1-209ENST00000437951 ZNF843Q8N446 348 aa8.43□□□□□ -1.06
PTCH1-209ENST00000437951 TRAV10A0A0B4J240 114 aa8.43□□□□□ -1.06
PTCH1-209ENST00000437951 GRNP28799 593 aaKnown RBP8.43□□□□□ -1.06
PTCH1-209ENST00000437951 LOC100131303A0A0U1RQF7 123 aa8.43□□□□□ -1.06
PTCH1-209ENST00000437951 PIEZO1Q92508 2521 aa8.43□□□□□ -1.06
PTCH1-209ENST00000437951 RETNLBQ9BQ08 111 aa8.42□□□□□ -1.06
PTCH1-209ENST00000437951 ZNF702PQ9H963 129 aa8.42□□□□□ -1.06
PTCH1-209ENST00000437951 CRIP2P52943 208 aaPredicted RBP8.42□□□□□ -1.06
PTCH1-209ENST00000437951 BRWD1-AS2P59051 145 aa8.42□□□□□ -1.06
PTCH1-209ENST00000437951 C1orf64Q8NEQ6 169 aa8.42□□□□□ -1.06
PTCH1-209ENST00000437951 SMIM1B2RUZ4 78 aa8.41□□□□□ -1.06
PTCH1-209ENST00000437951 C4orf26Q17RF5 130 aa8.4□□□□□ -1.06
PTCH1-209ENST00000437951 PRM2P04554 102 aa8.4□□□□□ -1.06
PTCH1-209ENST00000437951 IGHV6-1A0A0B4J1U7 121 aa8.4□□□□□ -1.06
PTCH1-209ENST00000437951 PLA2G5P39877 138 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms