RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 KRTDAPP60985 99 aa11.08□□□□□ -0.64
TTC28-202ENST00000431039 REG3AQ06141 175 aa11.08□□□□□ -0.64
TTC28-202ENST00000431039 PET117Q6UWS5 81 aa11.08□□□□□ -0.64
TTC28-202ENST00000431039 OR10D4PQ8NGN7 298 aa11.08□□□□□ -0.64
TTC28-202ENST00000431039 IBA57-AS1B1ANH7 110 aa11.07□□□□□ -0.64
TTC28-202ENST00000431039 CCL25O15444 150 aa11.07□□□□□ -0.64
TTC28-202ENST00000431039 ENHOQ6UWT2 76 aa11.07□□□□□ -0.64
TTC28-202ENST00000431039 UBE2D1P51668 147 aa11.06□□□□□ -0.64
TTC28-202ENST00000431039 UBE2WQ96B02 151 aa11.06□□□□□ -0.64
TTC28-202ENST00000431039 VPS13BQ7Z7G8 4022 aa11.06□□□□□ -0.64
TTC28-202ENST00000431039 TRAV13-1A0A0B4J241 112 aa11.05□□□□□ -0.64
TTC28-202ENST00000431039 LINC00959A0A1B0GUT2 108 aa11.05□□□□□ -0.64
TTC28-202ENST00000431039 CRPP02741 224 aa11.05□□□□□ -0.64
TTC28-202ENST00000431039 ODF1Q14990 250 aa11.05□□□□□ -0.64
TTC28-202ENST00000431039 Q6ZRN7 208 aaPredicted RBP11.05□□□□□ -0.64
TTC28-202ENST00000431039 FAM19A3Q7Z5A8 133 aa11.05□□□□□ -0.64
TTC28-202ENST00000431039 CHTOPQ9Y3Y2 248 aaKnown RBP11.05□□□□□ -0.64
TTC28-202ENST00000431039 TRAV8-4A0A0B4J246 113 aa11.04□□□□□ -0.64
TTC28-202ENST00000431039 EPM2AB3EWF7 344 aa11.04□□□□□ -0.64
TTC28-202ENST00000431039 H0Y8G0 127 aa11.04□□□□□ -0.64
TTC28-202ENST00000431039 MIAQ16674 131 aa11.04□□□□□ -0.64
TTC28-202ENST00000431039 LINC01545Q5VT33 79 aa11.04□□□□□ -0.64
TTC28-202ENST00000431039 CLPSL2Q6UWE3 100 aa11.04□□□□□ -0.64
TTC28-202ENST00000431039 TRAV8-3A0A0A6YYJ7 113 aa11.03□□□□□ -0.64
TTC28-202ENST00000431039 IGKV3OR2-268A0A0C4DH90 116 aa11.03□□□□□ -0.64
TTC28-202ENST00000431039 F8VRH5 84 aa11.03□□□□□ -0.64
TTC28-202ENST00000431039 SEC11AP67812 179 aa11.03□□□□□ -0.64
TTC28-202ENST00000431039 SS18Q15532 418 aa11.03□□□□□ -0.64
TTC28-202ENST00000431039 MRPL35Q9NZE8 188 aaKnown RBP11.03□□□□□ -0.64
TTC28-202ENST00000431039 C20orf202A1L168 122 aa11.02□□□□□ -0.65
TTC28-202ENST00000431039 IGLC3P0DOY3 106 aa11.02□□□□□ -0.65
TTC28-202ENST00000431039 LINC00242Q5T6M2 205 aa11.02□□□□□ -0.65
TTC28-202ENST00000431039 DMBT1Q9UGM3 2413 aaPredicted RBP11.01□□□□□ -0.65
TTC28-202ENST00000431039 IGLV4-69A0A075B6H9 119 aa11.01□□□□□ -0.65
TTC28-202ENST00000431039 A0A0J9YXV3 536 aa11.01□□□□□ -0.65
TTC28-202ENST00000431039 LOC105371267A0A1B0GV96 52 aa11.01□□□□□ -0.65
TTC28-202ENST00000431039 TINCRA0A1B0GVN0 87 aa11.01□□□□□ -0.65
TTC28-202ENST00000431039 NFE4Q86UQ8 179 aa11.01□□□□□ -0.65
TTC28-202ENST00000431039 EREGO14944 169 aa11□□□□□ -0.65
TTC28-202ENST00000431039 AKR1D1P51857 326 aa11□□□□□ -0.65
TTC28-202ENST00000431039 CHCHD10Q8WYQ3 142 aaPredicted RBP11□□□□□ -0.65
TTC28-202ENST00000431039 DPM2O94777 84 aa10.99□□□□□ -0.65
TTC28-202ENST00000431039 INAFM2P0DMQ5 153 aa10.99□□□□□ -0.65
TTC28-202ENST00000431039 PLNP26678 52 aa10.99□□□□□ -0.65
TTC28-202ENST00000431039 HERVK_113P63121 156 aa10.99□□□□□ -0.65
TTC28-202ENST00000431039 RMI2Q96E14 147 aa10.99□□□□□ -0.65
TTC28-202ENST00000431039 PMCHL2Q9BQD1 86 aa10.99□□□□□ -0.65
TTC28-202ENST00000431039 GEMIN7Q9H840 131 aaKnown RBP10.99□□□□□ -0.65
TTC28-202ENST00000431039 PGPEP1Q9NXJ5 209 aa10.99□□□□□ -0.65
TTC28-202ENST00000431039 IGLV5-45A0A087WSX0 123 aa10.98□□□□□ -0.65
TTC28-202ENST00000431039 COX6A2Q02221 97 aa10.98□□□□□ -0.65
TTC28-202ENST00000431039 JOSD1Q15040 202 aaPredicted RBP10.98□□□□□ -0.65
TTC28-202ENST00000431039 CD164L2Q6UWJ8 174 aa10.98□□□□□ -0.65
TTC28-202ENST00000431039 C1orf43Q9BWL3 253 aa10.98□□□□□ -0.65
TTC28-202ENST00000431039 Q9HAA7 133 aa10.98□□□□□ -0.65
TTC28-202ENST00000431039 IGLV10-54A0A075B6I4 117 aa10.97□□□□□ -0.65
TTC28-202ENST00000431039 C11orf86A6NJI1 115 aa10.97□□□□□ -0.65
TTC28-202ENST00000431039 IGKCP01834 107 aa10.97□□□□□ -0.65
TTC28-202ENST00000431039 XCL1P47992 114 aa10.97□□□□□ -0.65
TTC28-202ENST00000431039 XGP55808 180 aa10.97□□□□□ -0.65
TTC28-202ENST00000431039 KRTAP26-1Q6PEX3 210 aa10.97□□□□□ -0.65
TTC28-202ENST00000431039 CHAC1Q9BUX1 264 aa10.97□□□□□ -0.65
TTC28-202ENST00000431039 MYCBP2O75592 4640 aa10.96□□□□□ -0.65
TTC28-202ENST00000431039 IGHV3OR16-9A0A0B4J2B5 98 aa10.96□□□□□ -0.65
TTC28-202ENST00000431039 GAGE12HA6NDE8 117 aa10.96□□□□□ -0.65
TTC28-202ENST00000431039 SCGB1D1O95968 90 aa10.96□□□□□ -0.65
TTC28-202ENST00000431039 Q5VSD8 79 aa10.96□□□□□ -0.65
TTC28-202ENST00000431039 CDPF1Q6NVV7 123 aa10.96□□□□□ -0.65
TTC28-202ENST00000431039 COX11Q9Y6N1 276 aa10.96□□□□□ -0.65
TTC28-202ENST00000431039 IGKV2D-24A0A075B6R9 120 aa10.95□□□□□ -0.66
TTC28-202ENST00000431039 ZNF22P17026 224 aaPredicted RBP10.95□□□□□ -0.66
TTC28-202ENST00000431039 KRTAP10-1P60331 282 aa10.95□□□□□ -0.66
TTC28-202ENST00000431039 FOXI1Q12951 378 aa10.95□□□□□ -0.66
TTC28-202ENST00000431039 TM2D2Q9BX73 214 aa10.95□□□□□ -0.66
TTC28-202ENST00000431039 A0A087WTM6 91 aa10.94□□□□□ -0.66
TTC28-202ENST00000431039 LINC01561Q8N1V8 128 aa10.94□□□□□ -0.66
TTC28-202ENST00000431039 LINC00469Q8N7U9 141 aa10.94□□□□□ -0.66
TTC28-202ENST00000431039 CDKN2A-AS1Q9UH64 79 aa10.94□□□□□ -0.66
TTC28-202ENST00000431039 FLG2Q5D862 2391 aaPredicted RBP10.94□□□□□ -0.66
TTC28-202ENST00000431039 DNAH8Q96JB1 4490 aa10.93□□□□□ -0.66
TTC28-202ENST00000431039 A0A087WZ39 114 aa10.93□□□□□ -0.66
TTC28-202ENST00000431039 H3BRM9 83 aa10.93□□□□□ -0.66
TTC28-202ENST00000431039 PYY3Q5JQD4 70 aa10.93□□□□□ -0.66
TTC28-202ENST00000431039 TMEM170BQ5T4T1 132 aa10.93□□□□□ -0.66
TTC28-202ENST00000431039 COX7A2LO14548 114 aa10.92□□□□□ -0.66
TTC28-202ENST00000431039 C5orf38Q86SI9 138 aa10.92□□□□□ -0.66
TTC28-202ENST00000431039 SMR3BP02814 79 aaPredicted RBP10.91□□□□□ -0.66
TTC28-202ENST00000431039 HAMPP81172 84 aa10.91□□□□□ -0.66
TTC28-202ENST00000431039 TMEM223A0PJW6 202 aa10.9□□□□□ -0.66
TTC28-202ENST00000431039 ATOH7Q8N100 152 aa10.9□□□□□ -0.66
TTC28-202ENST00000431039 SRRM2Q9UQ35 2752 aaKnown RBP10.88□□□□□ -0.67
TTC28-202ENST00000431039 MALP21145 153 aa10.88□□□□□ -0.67
TTC28-202ENST00000431039 GCSHP23434 173 aa10.88□□□□□ -0.67
TTC28-202ENST00000431039 SMIM1B2RUZ4 78 aa10.87□□□□□ -0.67
TTC28-202ENST00000431039 APOMO95445 188 aa10.87□□□□□ -0.67
TTC28-202ENST00000431039 SPINK8P0C7L1 97 aa10.87□□□□□ -0.67
TTC28-202ENST00000431039 HERVK_113P61574 105 aa10.87□□□□□ -0.67
TTC28-202ENST00000431039 STPG4Q8N801 248 aa10.87□□□□□ -0.67
TTC28-202ENST00000431039 IGHV3-64A0A075B6Q5 118 aa10.86□□□□□ -0.67
TTC28-202ENST00000431039 IGHV1-58A0A0C4DH39 117 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms