RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 C9orf153Q5TBE3 101 aa9.7□□□□□ -0.86
COL6A2-204ENST00000409416 LINC01006Q8NI28 216 aa9.7□□□□□ -0.86
COL6A2-204ENST00000409416 BAHCC1Q9P281 2608 aa9.7□□□□□ -0.86
COL6A2-204ENST00000409416 NHLRC4P0CG21 123 aaPredicted RBP9.7□□□□□ -0.86
COL6A2-204ENST00000409416 CLEC2BQ92478 149 aa9.7□□□□□ -0.86
COL6A2-204ENST00000409416 Q9H8V8 135 aa9.7□□□□□ -0.86
COL6A2-204ENST00000409416 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.69□□□□□ -0.86
COL6A2-204ENST00000409416 ADAMTSL4-AS1Q5T5F5 129 aa9.69□□□□□ -0.86
COL6A2-204ENST00000409416 ODF3Q96PU9 254 aa9.69□□□□□ -0.86
COL6A2-204ENST00000409416 EDA2RQ9HAV5 297 aa9.69□□□□□ -0.86
COL6A2-204ENST00000409416 XCL1P47992 114 aa9.69□□□□□ -0.86
COL6A2-204ENST00000409416 LINC00526Q96FQ7 95 aa9.69□□□□□ -0.86
COL6A2-204ENST00000409416 LINC00158P58513 81 aa9.68□□□□□ -0.86
COL6A2-204ENST00000409416 TMEM263Q8WUH6 116 aaKnown RBP9.68□□□□□ -0.86
COL6A2-204ENST00000409416 EIF4EBP3O60516 100 aaPredicted RBP9.68□□□□□ -0.86
COL6A2-204ENST00000409416 TRIAP1O43715 76 aa9.68□□□□□ -0.86
COL6A2-204ENST00000409416 ATXN8Q156A1 80 aa9.67□□□□□ -0.86
COL6A2-204ENST00000409416 TEX49A0A1B0GTD5 131 aa9.67□□□□□ -0.86
COL6A2-204ENST00000409416 C5orf47Q569G3 176 aa9.67□□□□□ -0.86
COL6A2-204ENST00000409416 C2orf82Q6UX34 121 aa9.66□□□□□ -0.86
COL6A2-204ENST00000409416 KLK5Q9Y337 293 aaPredicted RBP9.66□□□□□ -0.86
COL6A2-204ENST00000409416 IGHV1-58A0A0C4DH39 117 aa9.66□□□□□ -0.86
COL6A2-204ENST00000409416 COX6CP09669 75 aa9.66□□□□□ -0.86
COL6A2-204ENST00000409416 LINC01620Q4KN68 170 aa9.66□□□□□ -0.86
COL6A2-204ENST00000409416 RPL13AP40429 203 aaKnown RBP9.66□□□□□ -0.86
COL6A2-204ENST00000409416 C4orf3Q8WVX3 66 aa9.66□□□□□ -0.86
COL6A2-204ENST00000409416 PRB2P02812 416 aaPredicted RBP9.65□□□□□ -0.86
COL6A2-204ENST00000409416 ATP6V0E2Q8NHE4 81 aa9.65□□□□□ -0.86
COL6A2-204ENST00000409416 PIK3CD-AS1Q5SR53 167 aa9.65□□□□□ -0.86
COL6A2-204ENST00000409416 CSDC2Q9Y534 153 aaKnown RBP9.65□□□□□ -0.86
COL6A2-204ENST00000409416 COX6A2Q02221 97 aa9.65□□□□□ -0.87
COL6A2-204ENST00000409416 TMEM101Q96IK0 257 aa9.65□□□□□ -0.87
COL6A2-204ENST00000409416 C1orf158Q8N1D5 194 aa9.64□□□□□ -0.87
COL6A2-204ENST00000409416 VSIG2Q96IQ7 327 aa9.64□□□□□ -0.87
COL6A2-204ENST00000409416 UBE2D4Q9Y2X8 147 aa9.64□□□□□ -0.87
COL6A2-204ENST00000409416 ICOSQ9Y6W8 199 aa9.64□□□□□ -0.87
COL6A2-204ENST00000409416 CHCHD7Q9BUK0 85 aa9.63□□□□□ -0.87
COL6A2-204ENST00000409416 A0A0B4J2C4 111 aa9.63□□□□□ -0.87
COL6A2-204ENST00000409416 SPATA3Q8NHX4 192 aa9.63□□□□□ -0.87
COL6A2-204ENST00000409416 TMEM89A2RUT3 159 aa9.63□□□□□ -0.87
COL6A2-204ENST00000409416 F5H768 121 aa9.63□□□□□ -0.87
COL6A2-204ENST00000409416 MRPS36P82909 103 aaKnown RBP9.63□□□□□ -0.87
COL6A2-204ENST00000409416 CIRBPQ14011 172 aaKnown RBP9.62□□□□□ -0.87
COL6A2-204ENST00000409416 FAM236AA0A1B0GUQ0 79 aa9.62□□□□□ -0.87
COL6A2-204ENST00000409416 FAM236BA0A1B0GV22 79 aa9.62□□□□□ -0.87
COL6A2-204ENST00000409416 PAX4O43316 350 aa9.61□□□□□ -0.87
COL6A2-204ENST00000409416 SPANXA1Q9NS26 97 aa9.61□□□□□ -0.87
COL6A2-204ENST00000409416 GYPEP15421 78 aa9.61□□□□□ -0.87
COL6A2-204ENST00000409416 A0A096LNT2 108 aa9.6□□□□□ -0.87
COL6A2-204ENST00000409416 UBE2WQ96B02 151 aa9.6□□□□□ -0.87
COL6A2-204ENST00000409416 SMIM9A6NGZ8 99 aa9.6□□□□□ -0.87
COL6A2-204ENST00000409416 MIAQ16674 131 aa9.6□□□□□ -0.87
COL6A2-204ENST00000409416 PYGO1Q9Y3Y4 419 aa9.6□□□□□ -0.87
COL6A2-204ENST00000409416 PKD1L1Q8TDX9 2849 aa9.6□□□□□ -0.87
COL6A2-204ENST00000409416 TINCRA0A1B0GVN0 87 aa9.6□□□□□ -0.87
COL6A2-204ENST00000409416 Q8N3U1 123 aa9.6□□□□□ -0.87
COL6A2-204ENST00000409416 FAM104AQ969W3 186 aa9.59□□□□□ -0.87
COL6A2-204ENST00000409416 LY6G6DO95868 133 aa9.59□□□□□ -0.87
COL6A2-204ENST00000409416 C6orf226Q5I0X4 101 aa9.59□□□□□ -0.87
COL6A2-204ENST00000409416 FAM19A5Q7Z5A7 132 aaPredicted RBP9.59□□□□□ -0.87
COL6A2-204ENST00000409416 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.59□□□□□ -0.87
COL6A2-204ENST00000409416 TMEM243Q9BU79 118 aa9.59□□□□□ -0.87
COL6A2-204ENST00000409416 K7EQD1 137 aa9.58□□□□□ -0.88
COL6A2-204ENST00000409416 MRAPQ8TCY5 172 aa9.58□□□□□ -0.88
COL6A2-204ENST00000409416 LITAFQ99732 161 aa9.58□□□□□ -0.88
COL6A2-204ENST00000409416 Q9HAA7 133 aa9.57□□□□□ -0.88
COL6A2-204ENST00000409416 TMEM126AQ9H061 195 aa9.57□□□□□ -0.88
COL6A2-204ENST00000409416 TRBV10-2A0A0K0K1G8 114 aa9.57□□□□□ -0.88
COL6A2-204ENST00000409416 ANGP03950 147 aaKnown RBP9.57□□□□□ -0.88
COL6A2-204ENST00000409416 C11orf72Q8NBR9 251 aa9.57□□□□□ -0.88
COL6A2-204ENST00000409416 HERVK_113P63121 156 aa9.56□□□□□ -0.88
COL6A2-204ENST00000409416 GAGE2AQ6NT46 116 aa9.56□□□□□ -0.88
COL6A2-204ENST00000409416 ATP5G1P05496 136 aa9.56□□□□□ -0.88
COL6A2-204ENST00000409416 H7C423 109 aa9.55□□□□□ -0.88
COL6A2-204ENST00000409416 IGLV4-60A0A075B6I1 120 aa9.55□□□□□ -0.88
COL6A2-204ENST00000409416 TRBV30A0A0K0K1B3 111 aa9.55□□□□□ -0.88
COL6A2-204ENST00000409416 LINC00242Q5T6M2 205 aa9.54□□□□□ -0.88
COL6A2-204ENST00000409416 FAM222AQ5U5X8 452 aa9.54□□□□□ -0.88
COL6A2-204ENST00000409416 OXLD1Q5BKU9 147 aa9.54□□□□□ -0.88
COL6A2-204ENST00000409416 SBSPONQ8IVN8 264 aa9.54□□□□□ -0.88
COL6A2-204ENST00000409416 MALP21145 153 aa9.53□□□□□ -0.88
COL6A2-204ENST00000409416 C1orf43Q9BWL3 253 aa9.53□□□□□ -0.88
COL6A2-204ENST00000409416 J3KT08 172 aa9.53□□□□□ -0.88
COL6A2-204ENST00000409416 PRR3P79522 188 aaKnown RBP9.53□□□□□ -0.88
COL6A2-204ENST00000409416 SPANXDQ9BXN6 97 aa9.53□□□□□ -0.88
COL6A2-204ENST00000409416 SPANXCQ9NY87 97 aa9.53□□□□□ -0.88
COL6A2-204ENST00000409416 TRRAPQ9Y4A5 3859 aa9.53□□□□□ -0.88
COL6A2-204ENST00000409416 KMT2BQ9UMN6 2715 aaPredicted RBP9.53□□□□□ -0.88
COL6A2-204ENST00000409416 HRCT1Q6UXD1 115 aa9.53□□□□□ -0.88
COL6A2-204ENST00000409416 NTM-AS1Q6ZSK4 140 aa9.53□□□□□ -0.88
COL6A2-204ENST00000409416 LINC00308Q8TCZ7 52 aa9.53□□□□□ -0.88
COL6A2-204ENST00000409416 DNAJC30Q96LL9 226 aa9.53□□□□□ -0.88
COL6A2-204ENST00000409416 RETNQ9HD89 108 aa9.53□□□□□ -0.88
COL6A2-204ENST00000409416 MIR7-3HGQ8N6C7 128 aa9.52□□□□□ -0.89
COL6A2-204ENST00000409416 DAD1P61803 113 aa9.51□□□□□ -0.89
COL6A2-204ENST00000409416 NDUFA1O15239 70 aa9.51□□□□□ -0.89
COL6A2-204ENST00000409416 SLPIP03973 132 aa9.51□□□□□ -0.89
COL6A2-204ENST00000409416 KRTAP1-3Q8IUG1 177 aa9.51□□□□□ -0.89
COL6A2-204ENST00000409416 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
COL6A2-204ENST00000409416 C9orf116Q5BN46 136 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms