RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 GAGE2EQ4V326 116 aa14.03□□□□□ -0.16
U2AF1-202ENST00000380276 FAM104BQ5XKR9 115 aa14.03□□□□□ -0.16
U2AF1-202ENST00000380276 GAGE2DQ9UEU5 116 aa14.03□□□□□ -0.16
U2AF1-202ENST00000380276 H0Y9J4 135 aa14.02□□□□□ -0.17
U2AF1-202ENST00000380276 CKS2P33552 79 aa14.02□□□□□ -0.17
U2AF1-202ENST00000380276 C10orf25Q5T742 122 aa14.02□□□□□ -0.17
U2AF1-202ENST00000380276 IFITM10A6NMD0 228 aa14.01□□□□□ -0.17
U2AF1-202ENST00000380276 SRP19P09132 144 aaKnown RBP14.01□□□□□ -0.17
U2AF1-202ENST00000380276 UBE2BP63146 152 aa14.01□□□□□ -0.17
U2AF1-202ENST00000380276 UNQ6190/PRO20217Q6UXQ8 127 aa14.01□□□□□ -0.17
U2AF1-202ENST00000380276 C20orf78Q9BR46 151 aa14.01□□□□□ -0.17
U2AF1-202ENST00000380276 A6NJY4 79 aa14□□□□□ -0.17
U2AF1-202ENST00000380276 F8WDY8 70 aa14□□□□□ -0.17
U2AF1-202ENST00000380276 TCAPO15273 167 aa14□□□□□ -0.17
U2AF1-202ENST00000380276 HBBP68871 147 aa14□□□□□ -0.17
U2AF1-202ENST00000380276 KRTAP11-1Q8IUC1 163 aa14□□□□□ -0.17
U2AF1-202ENST00000380276 LINC00862A6NCI5 91 aa13.99□□□□□ -0.17
U2AF1-202ENST00000380276 ADIRFQ15847 76 aa13.99□□□□□ -0.17
U2AF1-202ENST00000380276 AKAP14Q86UN6 197 aa13.99□□□□□ -0.17
U2AF1-202ENST00000380276 SPANXA1Q9NS26 97 aa13.99□□□□□ -0.17
U2AF1-202ENST00000380276 C6orf48Q9UBA6 75 aa13.99□□□□□ -0.17
U2AF1-202ENST00000380276 IGHV3OR16-9A0A0B4J2B5 98 aa13.98□□□□□ -0.17
U2AF1-202ENST00000380276 TNFRSF6BO95407 300 aa13.98□□□□□ -0.17
U2AF1-202ENST00000380276 UBE2D1P51668 147 aa13.98□□□□□ -0.17
U2AF1-202ENST00000380276 TMEM241Q24JQ0 296 aa13.98□□□□□ -0.17
U2AF1-202ENST00000380276 TGIF2-C20orf24A0A0A6YYL0 155 aa13.97□□□□□ -0.17
U2AF1-202ENST00000380276 FAM74A3Q4VXF1 159 aa13.97□□□□□ -0.17
U2AF1-202ENST00000380276 SMIM2Q9BVW6 85 aa13.97□□□□□ -0.17
U2AF1-202ENST00000380276 M0QXV9 152 aa13.96□□□□□ -0.17
U2AF1-202ENST00000380276 TLX1NBP0CAT3 122 aa13.96□□□□□ -0.17
U2AF1-202ENST00000380276 RPL23P62829 140 aaKnown RBP13.96□□□□□ -0.17
U2AF1-202ENST00000380276 IGLV1-50A0A075B6I6 118 aa13.95□□□□□ -0.18
U2AF1-202ENST00000380276 TRBV24-1A0A075B6N3 115 aa13.95□□□□□ -0.18
U2AF1-202ENST00000380276 D6R8Y8 96 aa13.95□□□□□ -0.18
U2AF1-202ENST00000380276 SMDT1Q9H4I9 107 aa13.95□□□□□ -0.18
U2AF1-202ENST00000380276 RPL32P62910 135 aaKnown RBP13.94□□□□□ -0.18
U2AF1-202ENST00000380276 MRPS36P82909 103 aaKnown RBP13.94□□□□□ -0.18
U2AF1-202ENST00000380276 PRR4Q16378 134 aa13.94□□□□□ -0.18
U2AF1-202ENST00000380276 FAM104AQ969W3 186 aa13.94□□□□□ -0.18
U2AF1-202ENST00000380276 hCG_2014768A0A024R1R8 64 aa13.93□□□□□ -0.18
U2AF1-202ENST00000380276 A0A1B0GW15 77 aa13.93□□□□□ -0.18
U2AF1-202ENST00000380276 SMIM27A0A1W2PRY6 76 aa13.93□□□□□ -0.18
U2AF1-202ENST00000380276 MRPL54Q6P161 138 aaKnown RBP13.93□□□□□ -0.18
U2AF1-202ENST00000380276 NPYP01303 97 aa13.92□□□□□ -0.18
U2AF1-202ENST00000380276 F8W036 122 aa13.91□□□□□ -0.18
U2AF1-202ENST00000380276 IFI27P40305 119 aaPredicted RBP13.91□□□□□ -0.18
U2AF1-202ENST00000380276 NAT8Q9UHE5 227 aa13.91□□□□□ -0.18
U2AF1-202ENST00000380276 S100A8P05109 93 aa13.9□□□□□ -0.18
U2AF1-202ENST00000380276 RAB5AP20339 215 aa13.9□□□□□ -0.18
U2AF1-202ENST00000380276 PACRGQ96M98 296 aaPredicted RBP13.9□□□□□ -0.18
U2AF1-202ENST00000380276 KRTAP1-4P0C5Y4 121 aa13.89□□□□□ -0.19
U2AF1-202ENST00000380276 C2orf82Q6UX34 121 aa13.89□□□□□ -0.19
U2AF1-202ENST00000380276 KRTAP7-1Q8IUC3 87 aa13.88□□□□□ -0.19
U2AF1-202ENST00000380276 TRBV30A0A0K0K1B3 111 aa13.87□□□□□ -0.19
U2AF1-202ENST00000380276 RPL13AP40429 203 aaKnown RBP13.87□□□□□ -0.19
U2AF1-202ENST00000380276 KIAA0087Q14695 138 aa13.87□□□□□ -0.19
U2AF1-202ENST00000380276 NDUFC2-KCTD14E9PQ53 114 aa13.86□□□□□ -0.19
U2AF1-202ENST00000380276 LINC00242Q5T6M2 205 aa13.85□□□□□ -0.19
U2AF1-202ENST00000380276 IGLV4-3A0A075B6K6 122 aa13.84□□□□□ -0.19
U2AF1-202ENST00000380276 PPBPP02775 128 aa13.84□□□□□ -0.19
U2AF1-202ENST00000380276 C9orf129Q5T035 196 aaKnown RBP13.84□□□□□ -0.19
U2AF1-202ENST00000380276 TMEM141Q96I45 108 aa13.84□□□□□ -0.19
U2AF1-202ENST00000380276 C9JQL5 133 aa13.83□□□□□ -0.2
U2AF1-202ENST00000380276 PRSS2P07478 247 aa13.83□□□□□ -0.2
U2AF1-202ENST00000380276 TEX43Q6ZNM6 134 aa13.83□□□□□ -0.2
U2AF1-202ENST00000380276 ORMDL3Q8N138 153 aa13.83□□□□□ -0.2
U2AF1-202ENST00000380276 TOMM7Q9P0U1 55 aa13.83□□□□□ -0.2
U2AF1-202ENST00000380276 PRELID3AQ96N28 172 aa13.82□□□□□ -0.2
U2AF1-202ENST00000380276 C2orf88Q9BSF0 95 aa13.82□□□□□ -0.2
U2AF1-202ENST00000380276 A0A1B0GXF2 115 aa13.81□□□□□ -0.2
U2AF1-202ENST00000380276 TMEM136Q6ZRR5 245 aa13.81□□□□□ -0.2
U2AF1-202ENST00000380276 LINC00469Q8N7U9 141 aa13.81□□□□□ -0.2
U2AF1-202ENST00000380276 PYGO1Q9Y3Y4 419 aa13.81□□□□□ -0.2
U2AF1-202ENST00000380276 LOC389332A0A1B0GUA5 103 aa13.8□□□□□ -0.2
U2AF1-202ENST00000380276 PEA15Q15121 130 aa13.8□□□□□ -0.2
U2AF1-202ENST00000380276 TSPAN13O95857 204 aa13.79□□□□□ -0.2
U2AF1-202ENST00000380276 CKS1BP61024 79 aa13.79□□□□□ -0.2
U2AF1-202ENST00000380276 Q6ZN92 141 aa13.79□□□□□ -0.2
U2AF1-202ENST00000380276 ZNF861PO60384 105 aa13.78□□□□□ -0.2
U2AF1-202ENST00000380276 SRSF3P84103 164 aaKnown RBP13.78□□□□□ -0.2
U2AF1-202ENST00000380276 ZC2HC1BQ5TFG8 222 aa13.78□□□□□ -0.2
U2AF1-202ENST00000380276 CARHSP1Q9Y2V2 147 aaKnown RBP13.78□□□□□ -0.2
U2AF1-202ENST00000380276 C22orf24Q9Y442 160 aa13.76□□□□□ -0.21
U2AF1-202ENST00000380276 NUPR1O60356 82 aa13.75□□□□□ -0.21
U2AF1-202ENST00000380276 C6orf226Q5I0X4 101 aa13.75□□□□□ -0.21
U2AF1-202ENST00000380276 LINC01561Q8N1V8 128 aa13.75□□□□□ -0.21
U2AF1-202ENST00000380276 MAP1LC3AQ9H492 121 aa13.75□□□□□ -0.21
U2AF1-202ENST00000380276 XAGE1AQ9HD64 81 aa13.75□□□□□ -0.21
U2AF1-202ENST00000380276 CYSLTR1Q9Y271 337 aa13.75□□□□□ -0.21
U2AF1-202ENST00000380276 A0A0U1RQV1 116 aa13.74□□□□□ -0.21
U2AF1-202ENST00000380276 LBHQ53QV2 105 aaPredicted RBP13.74□□□□□ -0.21
U2AF1-202ENST00000380276 CTDSP1Q9GZU7 261 aa13.74□□□□□ -0.21
U2AF1-202ENST00000380276 VCX2Q9H322 139 aa13.74□□□□□ -0.21
U2AF1-202ENST00000380276 C2orf66Q6UXQ4 117 aa13.73□□□□□ -0.21
U2AF1-202ENST00000380276 ATP5L2Q7Z4Y8 100 aa13.73□□□□□ -0.21
U2AF1-202ENST00000380276 ALKBH7Q9BT30 221 aaPredicted RBP13.73□□□□□ -0.21
U2AF1-202ENST00000380276 LINC00173Q6ZV60 143 aa13.7□□□□□ -0.22
U2AF1-202ENST00000380276 Q8IZM0 81 aa13.7□□□□□ -0.22
U2AF1-202ENST00000380276 Q8N8P6 123 aa13.69□□□□□ -0.22
U2AF1-202ENST00000380276 LAMTOR2Q9Y2Q5 125 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms