RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 TRBV7-6A0A0J9YX20 115 aa7.47□□□□□ -1.21
PTCH1-204ENST00000375290 EGFEM1PQ0D2K5 195 aa7.47□□□□□ -1.21
PTCH1-204ENST00000375290 CASC2Q6XLA1 102 aa7.47□□□□□ -1.21
PTCH1-204ENST00000375290 A0A0U1RQV1 116 aa7.47□□□□□ -1.21
PTCH1-204ENST00000375290 H3BPC8 53 aa7.47□□□□□ -1.21
PTCH1-204ENST00000375290 LINC00242Q5T6M2 205 aa7.47□□□□□ -1.21
PTCH1-204ENST00000375290 C11orf71Q6IPW1 123 aa7.46□□□□□ -1.21
PTCH1-204ENST00000375290 POM121L12Q8N7R1 296 aa7.46□□□□□ -1.21
PTCH1-204ENST00000375290 CSPG4Q6UVK1 2322 aa7.46□□□□□ -1.22
PTCH1-204ENST00000375290 MUC4Q99102 2169 aa7.45□□□□□ -1.22
PTCH1-204ENST00000375290 RPL37AP8A6NKH3 93 aa7.45□□□□□ -1.22
PTCH1-204ENST00000375290 LINC00959A0A1B0GUT2 108 aa7.45□□□□□ -1.22
PTCH1-204ENST00000375290 SYCNQ0VAF6 134 aa7.45□□□□□ -1.22
PTCH1-204ENST00000375290 HIVEP2P31629 2446 aa7.45□□□□□ -1.22
PTCH1-204ENST00000375290 SPRY2O43597 315 aa7.45□□□□□ -1.22
PTCH1-204ENST00000375290 BEAN1Q3B7T3 259 aa7.45□□□□□ -1.22
PTCH1-204ENST00000375290 ESRGQ1W209 222 aa7.44□□□□□ -1.22
PTCH1-204ENST00000375290 C11orf21Q9P2W6 132 aa7.44□□□□□ -1.22
PTCH1-204ENST00000375290 PMAIP1Q13794 54 aa7.44□□□□□ -1.22
PTCH1-204ENST00000375290 Q8N3U1 123 aa7.44□□□□□ -1.22
PTCH1-204ENST00000375290 TET2Q6N021 2002 aaPredicted RBP7.44□□□□□ -1.22
PTCH1-204ENST00000375290 TMEM254Q8TBM7 123 aa7.44□□□□□ -1.22
PTCH1-204ENST00000375290 ERC2-IT1O76042 136 aa7.44□□□□□ -1.22
PTCH1-204ENST00000375290 SPG11Q96JI7 2443 aa7.44□□□□□ -1.22
PTCH1-204ENST00000375290 FAM30AQ9NZY2 134 aa7.43□□□□□ -1.22
PTCH1-204ENST00000375290 IGLV5-45A0A087WSX0 123 aa7.43□□□□□ -1.22
PTCH1-204ENST00000375290 CUL9Q8IWT3 2517 aa7.43□□□□□ -1.22
PTCH1-204ENST00000375290 WISP2O76076 250 aa7.42□□□□□ -1.22
PTCH1-204ENST00000375290 IGLV5-39A0A0G2JS06 123 aa7.42□□□□□ -1.22
PTCH1-204ENST00000375290 HRCT1Q6UXD1 115 aa7.42□□□□□ -1.22
PTCH1-204ENST00000375290 PRO0461Q9UI25 63 aa7.42□□□□□ -1.22
PTCH1-204ENST00000375290 TECTAO75443 2155 aa7.42□□□□□ -1.22
PTCH1-204ENST00000375290 CELA1Q9UNI1 258 aa7.42□□□□□ -1.22
PTCH1-204ENST00000375290 C2orf48Q96LS8 159 aa7.41□□□□□ -1.22
PTCH1-204ENST00000375290 TP53AIP1Q9HCN2 124 aa7.41□□□□□ -1.22
PTCH1-204ENST00000375290 DEFB135Q30KP9 77 aa7.41□□□□□ -1.22
PTCH1-204ENST00000375290 SNURFQ9Y675 71 aa7.41□□□□□ -1.22
PTCH1-204ENST00000375290 C1orf158Q8N1D5 194 aa7.41□□□□□ -1.22
PTCH1-204ENST00000375290 SHISA2Q6UWI4 295 aa7.41□□□□□ -1.22
PTCH1-204ENST00000375290 WFDC10AQ9H1F0 79 aa7.41□□□□□ -1.22
PTCH1-204ENST00000375290 PRB1P04280 392 aa7.4□□□□□ -1.22
PTCH1-204ENST00000375290 HILS1P60008 231 aa7.4□□□□□ -1.22
PTCH1-204ENST00000375290 WFDC11Q8NEX6 87 aa7.4□□□□□ -1.22
PTCH1-204ENST00000375290 C11orf45Q8TAV5 145 aa7.4□□□□□ -1.22
PTCH1-204ENST00000375290 C2CD3Q4AC94 2353 aa7.4□□□□□ -1.22
PTCH1-204ENST00000375290 GRNP28799 593 aaKnown RBP7.4□□□□□ -1.22
PTCH1-204ENST00000375290 Q8NA96 180 aa7.4□□□□□ -1.22
PTCH1-204ENST00000375290 F8W735 103 aaPredicted RBP7.4□□□□□ -1.23
PTCH1-204ENST00000375290 PRR9Q5T870 116 aa7.4□□□□□ -1.23
PTCH1-204ENST00000375290 LOC110117498A0A087WWA1 95 aa7.39□□□□□ -1.23
PTCH1-204ENST00000375290 COL4A2P08572 1712 aa7.39□□□□□ -1.23
PTCH1-204ENST00000375290 C10orf25Q5T742 122 aa7.39□□□□□ -1.23
PTCH1-204ENST00000375290 ESM1Q9NQ30 184 aa7.39□□□□□ -1.23
PTCH1-204ENST00000375290 CACNA1AO00555 2505 aa7.38□□□□□ -1.23
PTCH1-204ENST00000375290 PTPRBP23467 1997 aa7.38□□□□□ -1.23
PTCH1-204ENST00000375290 SLPIP03973 132 aa7.38□□□□□ -1.23
PTCH1-204ENST00000375290 DNAJC9-AS1A6NH13 148 aa7.38□□□□□ -1.23
PTCH1-204ENST00000375290 TTC28Q96AY4 2481 aa7.38□□□□□ -1.23
PTCH1-204ENST00000375290 J3QKU1 62 aa7.38□□□□□ -1.23
PTCH1-204ENST00000375290 LINC01547P58512 204 aaPredicted RBP7.38□□□□□ -1.23
PTCH1-204ENST00000375290 HIGD2AQ9BW72 106 aa7.37□□□□□ -1.23
PTCH1-204ENST00000375290 LINC00575Q6W349 94 aa7.37□□□□□ -1.23
PTCH1-204ENST00000375290 HCG22E2RYF7 251 aa7.37□□□□□ -1.23
PTCH1-204ENST00000375290 C3orf84H3BNL1 204 aa7.37□□□□□ -1.23
PTCH1-204ENST00000375290 WFDC10BQ8IUB3 73 aa7.37□□□□□ -1.23
PTCH1-204ENST00000375290 TSPEAR-AS2P59090 65 aa7.36□□□□□ -1.23
PTCH1-204ENST00000375290 C1orf137Q5JT78 98 aa7.36□□□□□ -1.23
PTCH1-204ENST00000375290 A0A1W2PNU3 283 aaPredicted RBP7.36□□□□□ -1.23
PTCH1-204ENST00000375290 PLAC8L1A1L4L8 177 aa7.36□□□□□ -1.23
PTCH1-204ENST00000375290 KLK9Q2XQG4 91 aa7.36□□□□□ -1.23
PTCH1-204ENST00000375290 ADAMTSL4-AS1Q5T5F5 129 aa7.36□□□□□ -1.23
PTCH1-204ENST00000375290 MUC6Q6W4X9 2439 aa7.35□□□□□ -1.23
PTCH1-204ENST00000375290 FAM19A1Q7Z5A9 133 aa7.35□□□□□ -1.23
PTCH1-204ENST00000375290 A0A087WYN8 130 aa7.34□□□□□ -1.23
PTCH1-204ENST00000375290 Q6ZVQ6 151 aa7.34□□□□□ -1.23
PTCH1-204ENST00000375290 FAM19A4Q96LR4 140 aa7.34□□□□□ -1.23
PTCH1-204ENST00000375290 KIF25-AS1Q9Y6Z4 181 aa7.34□□□□□ -1.23
PTCH1-204ENST00000375290 OTOGLQ3ZCN5 2332 aa7.34□□□□□ -1.23
PTCH1-204ENST00000375290 CYSRT1A8MQ03 144 aa7.34□□□□□ -1.24
PTCH1-204ENST00000375290 NHLRC4P0CG21 123 aaPredicted RBP7.34□□□□□ -1.24
PTCH1-204ENST00000375290 LINC00846Q9NV44 126 aa7.33□□□□□ -1.24
PTCH1-204ENST00000375290 TRAV10A0A0B4J240 114 aa7.33□□□□□ -1.24
PTCH1-204ENST00000375290 PRB2P02812 416 aaPredicted RBP7.33□□□□□ -1.24
PTCH1-204ENST00000375290 ZNF702PQ9H963 129 aa7.33□□□□□ -1.24
PTCH1-204ENST00000375290 DEFB1P60022 68 aa7.33□□□□□ -1.24
PTCH1-204ENST00000375290 GAS8-AS1O95177 125 aa7.32□□□□□ -1.24
PTCH1-204ENST00000375290 NAV2Q8IVL1 2488 aa7.32□□□□□ -1.24
PTCH1-204ENST00000375290 XAGE1AQ9HD64 81 aa7.32□□□□□ -1.24
PTCH1-204ENST00000375290 Q6ZSV7 163 aa7.31□□□□□ -1.24
PTCH1-204ENST00000375290 MYO18BQ8IUG5 2567 aa7.31□□□□□ -1.24
PTCH1-204ENST00000375290 IGHV4-31P0DP07 118 aa7.31□□□□□ -1.24
PTCH1-204ENST00000375290 PTPN13Q12923 2485 aa7.31□□□□□ -1.24
PTCH1-204ENST00000375290 MAPK1IP1LQ8NDC0 245 aa7.31□□□□□ -1.24
PTCH1-204ENST00000375290 LINC00208Q96KT6 92 aa7.31□□□□□ -1.24
PTCH1-204ENST00000375290 C7orf33Q8WU49 177 aa7.3□□□□□ -1.24
PTCH1-204ENST00000375290 SCXQ7RTU7 201 aa7.3□□□□□ -1.24
PTCH1-204ENST00000375290 ZFHX2Q9C0A1 2572 aaPredicted RBP7.3□□□□□ -1.24
PTCH1-204ENST00000375290 VPREB1P12018 145 aa7.3□□□□□ -1.24
PTCH1-204ENST00000375290 Q8N2B8 174 aa7.3□□□□□ -1.24
PTCH1-204ENST00000375290 DEFB131BA0A096LNP1 70 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms