RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 K7ERS5 55 aa16.14■□□□□ 0.17
TM9SF3-201ENST00000371142 ZNF73O43830 326 aaPredicted RBP16.14■□□□□ 0.17
TM9SF3-201ENST00000371142 UBE2D3P61077 147 aa16.13■□□□□ 0.17
TM9SF3-201ENST00000371142 UBE2D2P62837 147 aa16.13■□□□□ 0.17
TM9SF3-201ENST00000371142 AVPP01185 164 aa16.13■□□□□ 0.17
TM9SF3-201ENST00000371142 SMR3AQ99954 134 aa16.13■□□□□ 0.17
TM9SF3-201ENST00000371142 MRGPRG-AS1Q2M3A8 158 aa16.13■□□□□ 0.17
TM9SF3-201ENST00000371142 CDC42SE2Q9NRR3 84 aa16.12■□□□□ 0.17
TM9SF3-201ENST00000371142 IGHV4-30-4P0DP06 118 aa16.12■□□□□ 0.17
TM9SF3-201ENST00000371142 FAM240AA0A1B0GVK7 77 aa16.11■□□□□ 0.17
TM9SF3-201ENST00000371142 NDUFA7O95182 113 aa16.11■□□□□ 0.17
TM9SF3-201ENST00000371142 FAM19A3Q7Z5A8 133 aa16.11■□□□□ 0.17
TM9SF3-201ENST00000371142 CYSRT1A8MQ03 144 aa16.11■□□□□ 0.17
TM9SF3-201ENST00000371142 COX17Q14061 63 aa16.11■□□□□ 0.17
TM9SF3-201ENST00000371142 FAM30AQ9NZY2 134 aa16.11■□□□□ 0.17
TM9SF3-201ENST00000371142 ACACBO00763 2458 aa16.11■□□□□ 0.17
TM9SF3-201ENST00000371142 NOTCH2Q04721 2471 aa16.1■□□□□ 0.17
TM9SF3-201ENST00000371142 SORL1Q92673 2214 aa16.1■□□□□ 0.17
TM9SF3-201ENST00000371142 PRR15LQ9BU68 103 aa16.1■□□□□ 0.17
TM9SF3-201ENST00000371142 Q8IZM0 81 aa16.09■□□□□ 0.17
TM9SF3-201ENST00000371142 CUL9Q8IWT3 2517 aa16.08■□□□□ 0.17
TM9SF3-201ENST00000371142 SERP2Q8N6R1 65 aa16.08■□□□□ 0.16
TM9SF3-201ENST00000371142 RETNQ9HD89 108 aa16.08■□□□□ 0.16
TM9SF3-201ENST00000371142 CRIP2P52943 208 aaPredicted RBP16.07■□□□□ 0.16
TM9SF3-201ENST00000371142 CEP192Q8TEP8 1941 aa16.07■□□□□ 0.16
TM9SF3-201ENST00000371142 PLXNB1O43157 2135 aa16.06■□□□□ 0.16
TM9SF3-201ENST00000371142 TTC28Q96AY4 2481 aa16.06■□□□□ 0.16
TM9SF3-201ENST00000371142 PTPN13Q12923 2485 aa16.05■□□□□ 0.16
TM9SF3-201ENST00000371142 C9orf116Q5BN46 136 aaPredicted RBP16.05■□□□□ 0.16
TM9SF3-201ENST00000371142 UNQ6190/PRO20217Q6UXQ8 127 aa16.05■□□□□ 0.16
TM9SF3-201ENST00000371142 ODF3L2Q3SX64 289 aa16.04■□□□□ 0.16
TM9SF3-201ENST00000371142 IGIPA6NJ69 53 aa16.04■□□□□ 0.16
TM9SF3-201ENST00000371142 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.03■□□□□ 0.16
TM9SF3-201ENST00000371142 Q8N9L7 120 aa16.03■□□□□ 0.16
TM9SF3-201ENST00000371142 HCFC1P51610 2035 aa16.03■□□□□ 0.16
TM9SF3-201ENST00000371142 PLA2G2AP14555 144 aa16.02■□□□□ 0.16
TM9SF3-201ENST00000371142 LINC00242Q5T6M2 205 aa16.02■□□□□ 0.16
TM9SF3-201ENST00000371142 KRTAP10-9P60411 292 aa16.02■□□□□ 0.15
TM9SF3-201ENST00000371142 NDUFC1O43677 76 aa16.01■□□□□ 0.15
TM9SF3-201ENST00000371142 LINC00474Q9P2X8 69 aa16.01■□□□□ 0.15
TM9SF3-201ENST00000371142 SONP18583 2426 aaKnown RBP16.01■□□□□ 0.15
TM9SF3-201ENST00000371142 M0QXV9 152 aa16.01■□□□□ 0.15
TM9SF3-201ENST00000371142 COX6A2Q02221 97 aa16.01■□□□□ 0.15
TM9SF3-201ENST00000371142 CNFNQ9BYD5 112 aa16■□□□□ 0.15
TM9SF3-201ENST00000371142 CCDC179H3BU77 68 aa16■□□□□ 0.15
TM9SF3-201ENST00000371142 C10orf25Q5T742 122 aa16■□□□□ 0.15
TM9SF3-201ENST00000371142 V9GYY9 64 aa16■□□□□ 0.15
TM9SF3-201ENST00000371142 IMUPQ9GZP8 106 aa15.99■□□□□ 0.15
TM9SF3-201ENST00000371142 ATP5EP56381 51 aaPredicted RBP15.99■□□□□ 0.15
TM9SF3-201ENST00000371142 MRPL55Q7Z7F7 128 aaKnown RBP15.99■□□□□ 0.15
TM9SF3-201ENST00000371142 CELA1Q9UNI1 258 aa15.99■□□□□ 0.15
TM9SF3-201ENST00000371142 A6NED7 52 aa15.98■□□□□ 0.15
TM9SF3-201ENST00000371142 XGP55808 180 aa15.98■□□□□ 0.15
TM9SF3-201ENST00000371142 BRI3O95415 125 aa15.98■□□□□ 0.15
TM9SF3-201ENST00000371142 SERP1Q9Y6X1 66 aa15.98■□□□□ 0.15
TM9SF3-201ENST00000371142 PRR3P79522 188 aaKnown RBP15.97■□□□□ 0.15
TM9SF3-201ENST00000371142 CHCHD7Q9BUK0 85 aa15.96■□□□□ 0.15
TM9SF3-201ENST00000371142 IGLV4-60A0A075B6I1 120 aa15.96■□□□□ 0.15
TM9SF3-201ENST00000371142 SMIM1B2RUZ4 78 aa15.96■□□□□ 0.15
TM9SF3-201ENST00000371142 C6orf223Q8N319 242 aa15.95■□□□□ 0.14
TM9SF3-201ENST00000371142 ATRXP46100 2492 aa15.95■□□□□ 0.14
TM9SF3-201ENST00000371142 COX7CP15954 63 aa15.95■□□□□ 0.14
TM9SF3-201ENST00000371142 NTM-AS1Q6ZSK4 140 aa15.95■□□□□ 0.14
TM9SF3-201ENST00000371142 TRBV10-3A0A0K0K1G6 114 aa15.95■□□□□ 0.14
TM9SF3-201ENST00000371142 LINC00694P0DN24 101 aa15.95■□□□□ 0.14
TM9SF3-201ENST00000371142 MUC22E2RYF6 1773 aaPredicted RBP15.94■□□□□ 0.14
TM9SF3-201ENST00000371142 URB1-AS1Q96HZ7 61 aa15.93■□□□□ 0.14
TM9SF3-201ENST00000371142 HIVEP3Q5T1R4 2406 aa15.93■□□□□ 0.14
TM9SF3-201ENST00000371142 Q6JHZ5 121 aa15.93■□□□□ 0.14
TM9SF3-201ENST00000371142 CIRBP-AS1Q8TBR5 109 aa15.92■□□□□ 0.14
TM9SF3-201ENST00000371142 Q8N814 137 aa15.92■□□□□ 0.14
TM9SF3-201ENST00000371142 REG3GQ6UW15 175 aa15.92■□□□□ 0.14
TM9SF3-201ENST00000371142 ATG2AQ2TAZ0 1938 aa15.91■□□□□ 0.14
TM9SF3-201ENST00000371142 MUC7Q8TAX7 377 aa15.91■□□□□ 0.14
TM9SF3-201ENST00000371142 EGFEM1PQ0D2K5 195 aa15.91■□□□□ 0.14
TM9SF3-201ENST00000371142 A0A087WYN8 130 aa15.91■□□□□ 0.14
TM9SF3-201ENST00000371142 LINC00310P59036 64 aa15.91■□□□□ 0.14
TM9SF3-201ENST00000371142 TSPEAR-AS2P59090 65 aa15.91■□□□□ 0.14
TM9SF3-201ENST00000371142 ESRGQ1W209 222 aa15.91■□□□□ 0.14
TM9SF3-201ENST00000371142 IGLV1-51P01701 117 aa15.9■□□□□ 0.14
TM9SF3-201ENST00000371142 ARHGAP32A7KAX9 2087 aa15.9■□□□□ 0.14
TM9SF3-201ENST00000371142 Q6ZTC4 211 aa15.9■□□□□ 0.14
TM9SF3-201ENST00000371142 FHL2Q14192 279 aa15.89■□□□□ 0.13
TM9SF3-201ENST00000371142 C1orf137Q5JT78 98 aa15.89■□□□□ 0.13
TM9SF3-201ENST00000371142 RPL28P46779 137 aaKnown RBP15.89■□□□□ 0.13
TM9SF3-201ENST00000371142 NUPR2A6NF83 97 aa15.88■□□□□ 0.13
TM9SF3-201ENST00000371142 Q6ZVQ6 151 aa15.87■□□□□ 0.13
TM9SF3-201ENST00000371142 ZNF580Q9UK33 172 aa15.87■□□□□ 0.13
TM9SF3-201ENST00000371142 RETNLBQ9BQ08 111 aa15.85■□□□□ 0.13
TM9SF3-201ENST00000371142 ADAMTSL4-AS1Q5T5F5 129 aa15.85■□□□□ 0.13
TM9SF3-201ENST00000371142 IGLV5-52A0A0A0MRZ9 124 aa15.85■□□□□ 0.13
TM9SF3-201ENST00000371142 A0A087WVE0 104 aa15.84■□□□□ 0.13
TM9SF3-201ENST00000371142 IGHV6-1A0A0B4J1U7 121 aa15.83■□□□□ 0.13
TM9SF3-201ENST00000371142 Q6ZSN1 163 aa15.83■□□□□ 0.13
TM9SF3-201ENST00000371142 Q6Q795 121 aa15.83■□□□□ 0.12
TM9SF3-201ENST00000371142 LINC00208Q96KT6 92 aa15.82■□□□□ 0.12
TM9SF3-201ENST00000371142 RAI1Q7Z5J4 1906 aaPredicted RBP15.82■□□□□ 0.12
TM9SF3-201ENST00000371142 A0A1W2PPR1 153 aa15.81■□□□□ 0.12
TM9SF3-201ENST00000371142 PRRC2AP48634 2157 aaKnown RBP15.81■□□□□ 0.12
TM9SF3-201ENST00000371142 LINC01556Q5JQF7 62 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms