RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 MUC7Q8TAX7 377 aa8.62□□□□□ -1.03
DEPDC1-201ENST00000370966 EDN2P20800 178 aa8.62□□□□□ -1.03
DEPDC1-201ENST00000370966 LOC100131303A0A0U1RQF7 123 aa8.61□□□□□ -1.03
DEPDC1-201ENST00000370966 LINC00242Q5T6M2 205 aa8.61□□□□□ -1.03
DEPDC1-201ENST00000370966 IGLV2-18A0A075B6J9 118 aa8.61□□□□□ -1.03
DEPDC1-201ENST00000370966 ZNF462Q96JM2 2506 aa8.61□□□□□ -1.03
DEPDC1-201ENST00000370966 SYCNQ0VAF6 134 aa8.61□□□□□ -1.03
DEPDC1-201ENST00000370966 POM121L12Q8N7R1 296 aa8.61□□□□□ -1.03
DEPDC1-201ENST00000370966 XAGE1AQ9HD64 81 aa8.61□□□□□ -1.03
DEPDC1-201ENST00000370966 NDUFS5O43920 106 aa8.6□□□□□ -1.03
DEPDC1-201ENST00000370966 IGLV1-51P01701 117 aa8.6□□□□□ -1.03
DEPDC1-201ENST00000370966 KRTAP10-9P60411 292 aa8.6□□□□□ -1.03
DEPDC1-201ENST00000370966 IGLV4-69A0A075B6H9 119 aa8.59□□□□□ -1.03
DEPDC1-201ENST00000370966 TET2Q6N021 2002 aaPredicted RBP8.59□□□□□ -1.03
DEPDC1-201ENST00000370966 FASNP49327 2511 aaKnown RBP8.59□□□□□ -1.03
DEPDC1-201ENST00000370966 BPY2O14599 106 aa8.59□□□□□ -1.03
DEPDC1-201ENST00000370966 Q8IZM0 81 aa8.59□□□□□ -1.03
DEPDC1-201ENST00000370966 COX17Q14061 63 aa8.59□□□□□ -1.03
DEPDC1-201ENST00000370966 CSDC2Q9Y534 153 aaKnown RBP8.59□□□□□ -1.03
DEPDC1-201ENST00000370966 AGRNO00468 2067 aa8.59□□□□□ -1.03
DEPDC1-201ENST00000370966 COL4A2P08572 1712 aa8.58□□□□□ -1.04
DEPDC1-201ENST00000370966 SLPIP03973 132 aa8.58□□□□□ -1.04
DEPDC1-201ENST00000370966 IGKV2-24A0A0C4DH68 120 aa8.58□□□□□ -1.04
DEPDC1-201ENST00000370966 KPRPQ5T749 579 aaPredicted RBP8.58□□□□□ -1.04
DEPDC1-201ENST00000370966 IMUPQ9GZP8 106 aa8.58□□□□□ -1.04
DEPDC1-201ENST00000370966 TRAV10A0A0B4J240 114 aa8.58□□□□□ -1.04
DEPDC1-201ENST00000370966 UQCRQO14949 82 aa8.58□□□□□ -1.04
DEPDC1-201ENST00000370966 XGP55808 180 aa8.58□□□□□ -1.04
DEPDC1-201ENST00000370966 BEAN1Q3B7T3 259 aa8.58□□□□□ -1.04
DEPDC1-201ENST00000370966 UPK3BQ9BT76 320 aa8.58□□□□□ -1.04
DEPDC1-201ENST00000370966 M0QXV9 152 aa8.57□□□□□ -1.04
DEPDC1-201ENST00000370966 C1orf158Q8N1D5 194 aa8.57□□□□□ -1.04
DEPDC1-201ENST00000370966 AMELXQ99217 191 aa8.57□□□□□ -1.04
DEPDC1-201ENST00000370966 FAM110AQ9BQ89 295 aa8.57□□□□□ -1.04
DEPDC1-201ENST00000370966 CCDC179H3BU77 68 aa8.57□□□□□ -1.04
DEPDC1-201ENST00000370966 CHCHD7Q9BUK0 85 aa8.57□□□□□ -1.04
DEPDC1-201ENST00000370966 B9D2Q9BPU9 175 aa8.56□□□□□ -1.04
DEPDC1-201ENST00000370966 HIGD2AQ9BW72 106 aa8.56□□□□□ -1.04
DEPDC1-201ENST00000370966 SMIM1B2RUZ4 78 aa8.56□□□□□ -1.04
DEPDC1-201ENST00000370966 TRAV23DV6A0A075B6W5 121 aa8.56□□□□□ -1.04
DEPDC1-201ENST00000370966 SMIM11BQ8TCY0 68 aa8.56□□□□□ -1.04
DEPDC1-201ENST00000370966 SDIM1Q6ZPB5 146 aa8.55□□□□□ -1.04
DEPDC1-201ENST00000370966 POLQO75417 2590 aa8.55□□□□□ -1.04
DEPDC1-201ENST00000370966 PLA2G2AP14555 144 aa8.54□□□□□ -1.04
DEPDC1-201ENST00000370966 M0R378 163 aa8.54□□□□□ -1.04
DEPDC1-201ENST00000370966 C16orf95Q9H693 158 aa8.54□□□□□ -1.04
DEPDC1-201ENST00000370966 A0A087WZ39 114 aa8.54□□□□□ -1.04
DEPDC1-201ENST00000370966 Q6ZQY7 126 aa8.54□□□□□ -1.04
DEPDC1-201ENST00000370966 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
DEPDC1-201ENST00000370966 KIF25-AS1Q9Y6Z4 181 aa8.53□□□□□ -1.04
DEPDC1-201ENST00000370966 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.53□□□□□ -1.04
DEPDC1-201ENST00000370966 IGHV4-30-4P0DP06 118 aa8.52□□□□□ -1.05
DEPDC1-201ENST00000370966 NDUFC2O95298 119 aa8.52□□□□□ -1.05
DEPDC1-201ENST00000370966 FAM240AA0A1B0GVK7 77 aa8.51□□□□□ -1.05
DEPDC1-201ENST00000370966 LINC00526Q96FQ7 95 aa8.51□□□□□ -1.05
DEPDC1-201ENST00000370966 FAM19A1Q7Z5A9 133 aa8.51□□□□□ -1.05
DEPDC1-201ENST00000370966 C20orf197Q8N268 126 aa8.51□□□□□ -1.05
DEPDC1-201ENST00000370966 CCKP06307 115 aa8.51□□□□□ -1.05
DEPDC1-201ENST00000370966 PRRC2CQ9Y520 2896 aaKnown RBP8.5□□□□□ -1.05
DEPDC1-201ENST00000370966 LINC00694P0DN24 101 aa8.5□□□□□ -1.05
DEPDC1-201ENST00000370966 FHL2Q14192 279 aa8.5□□□□□ -1.05
DEPDC1-201ENST00000370966 ENHOQ6UWT2 76 aa8.5□□□□□ -1.05
DEPDC1-201ENST00000370966 BRK1Q8WUW1 75 aa8.5□□□□□ -1.05
DEPDC1-201ENST00000370966 ACANP16112 2415 aa8.5□□□□□ -1.05
DEPDC1-201ENST00000370966 CYSRT1A8MQ03 144 aa8.5□□□□□ -1.05
DEPDC1-201ENST00000370966 RPL28P46779 137 aaKnown RBP8.5□□□□□ -1.05
DEPDC1-201ENST00000370966 WFDC9Q8NEX5 89 aa8.5□□□□□ -1.05
DEPDC1-201ENST00000370966 LINC01546A6NGU7 62 aa8.49□□□□□ -1.05
DEPDC1-201ENST00000370966 DHRS4-AS1Q9P1J3 65 aa8.49□□□□□ -1.05
DEPDC1-201ENST00000370966 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.49□□□□□ -1.05
DEPDC1-201ENST00000370966 DNAH12Q6ZR08 3092 aa8.49□□□□□ -1.05
DEPDC1-201ENST00000370966 H0Y9J4 135 aa8.49□□□□□ -1.05
DEPDC1-201ENST00000370966 C4orf48Q5BLP8 95 aa8.49□□□□□ -1.05
DEPDC1-201ENST00000370966 IGLV4-60A0A075B6I1 120 aa8.48□□□□□ -1.05
DEPDC1-201ENST00000370966 COX6A2Q02221 97 aa8.48□□□□□ -1.05
DEPDC1-201ENST00000370966 C3orf22Q8N5N4 141 aa8.48□□□□□ -1.05
DEPDC1-201ENST00000370966 ZNF73O43830 326 aaPredicted RBP8.48□□□□□ -1.05
DEPDC1-201ENST00000370966 EPG5Q9HCE0 2579 aa8.48□□□□□ -1.05
DEPDC1-201ENST00000370966 FAM19A5Q7Z5A7 132 aaPredicted RBP8.48□□□□□ -1.05
DEPDC1-201ENST00000370966 EGFEM1PQ0D2K5 195 aa8.47□□□□□ -1.05
DEPDC1-201ENST00000370966 Q8N2B8 174 aa8.47□□□□□ -1.05
DEPDC1-201ENST00000370966 A0A1B0GUV1 79 aa8.47□□□□□ -1.05
DEPDC1-201ENST00000370966 OXLD1Q5BKU9 147 aa8.47□□□□□ -1.05
DEPDC1-201ENST00000370966 ADAMTSL4-AS1Q5T5F5 129 aa8.47□□□□□ -1.05
DEPDC1-201ENST00000370966 Q6ZSN1 163 aa8.47□□□□□ -1.05
DEPDC1-201ENST00000370966 ANKRD17O75179 2603 aaKnown RBP8.47□□□□□ -1.05
DEPDC1-201ENST00000370966 CEP350Q5VT06 3117 aa8.47□□□□□ -1.05
DEPDC1-201ENST00000370966 Q6Q795 121 aa8.46□□□□□ -1.05
DEPDC1-201ENST00000370966 UNQ6190/PRO20217Q6UXQ8 127 aa8.46□□□□□ -1.05
DEPDC1-201ENST00000370966 USP17L23D6RBM5 183 aa8.46□□□□□ -1.05
DEPDC1-201ENST00000370966 FAM19A4Q96LR4 140 aa8.46□□□□□ -1.05
DEPDC1-201ENST00000370966 SMR3AQ99954 134 aa8.46□□□□□ -1.05
DEPDC1-201ENST00000370966 IGKV2-28A0A075B6P5 120 aa8.46□□□□□ -1.06
DEPDC1-201ENST00000370966 IGKV2D-28P01615 120 aa8.46□□□□□ -1.06
DEPDC1-201ENST00000370966 SERP2Q8N6R1 65 aa8.46□□□□□ -1.06
DEPDC1-201ENST00000370966 LINC00315P59091 139 aa8.46□□□□□ -1.06
DEPDC1-201ENST00000370966 V9GYY9 64 aa8.45□□□□□ -1.06
DEPDC1-201ENST00000370966 A0A0U1RQV1 116 aa8.45□□□□□ -1.06
DEPDC1-201ENST00000370966 SCXQ7RTU7 201 aa8.45□□□□□ -1.06
DEPDC1-201ENST00000370966 LOC107984640A0A0U1RRK4 108 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms