RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 Q8N8P6 123 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 VSIG2Q96IQ7 327 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 C20orf78Q9BR46 151 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 TMEM70Q9BUB7 260 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 HHLA3Q9XRX5 114 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 DYNC2H1Q8NCM8 4307 aaKnown RBP2.45□□□□□ -2.02
MCF2-202ENST00000370573 A0A0J9YY99 117 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 TRBV27A0A0K0K1C4 114 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 TRBV6-4A0A1B0GX49 114 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 SDHAF1A6NFY7 115 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 LINC01546A6NGU7 62 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 F5H768 121 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 H3BRM9 83 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 H7C1H1 209 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 PPP1R17O96001 155 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 ATP5G1P05496 136 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 HTN3P15516 51 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 RPL32P62910 135 aaKnown RBP2.45□□□□□ -2.02
MCF2-202ENST00000370573 TMEM97Q5BJF2 176 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 FAM19A2Q8N3H0 131 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 ZNRF2Q8NHG8 242 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 SMIM2Q9BVW6 85 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 MAP1LC3AQ9H492 121 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 ERG28Q9UKR5 140 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 A0A096LNJ9 63 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 TRBV10-1A0A0K0K1A3 114 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 TEX48A0A1B0GUV7 120 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 LINC00694P0DN24 101 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 HINT1P49773 126 aaPredicted RBP2.45□□□□□ -2.02
MCF2-202ENST00000370573 UBE2D3P61077 147 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 UBE2D2P62837 147 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 BVES-AS1Q5T3Y7 98 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 AMMECR1LQ6DCA0 310 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 SMIM29Q86T20 159 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 BOD1L2Q8IYS8 172 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 DNAJC30Q96LL9 226 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 NXT2Q9NPJ8 142 aaKnown RBP2.45□□□□□ -2.02
MCF2-202ENST00000370573 PRO0255Q9UI72 69 aa2.45□□□□□ -2.02
MCF2-202ENST00000370573 DNAH7Q8WXX0 4024 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 TRBV7-3A0A075B6L6 115 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 IGHV1-24A0A0C4DH33 117 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 F8W1H4 67 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 PMCHP20382 165 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 RHOHQ15669 191 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 NTM-AS1Q6ZSK4 140 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 LINC00173Q6ZV60 143 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 Q8N976 141 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 ATP6V0E2Q8NHE4 81 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 CHCHD1Q96BP2 118 aaKnown RBP2.44□□□□□ -2.02
MCF2-202ENST00000370573 PRADC1Q9BSG0 188 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 TMEM126AQ9H061 195 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 CYSLTR1Q9Y271 337 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 TENM2Q9NT68 2774 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 DEFB131BA0A096LNP1 70 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.44□□□□□ -2.02
MCF2-202ENST00000370573 I3L3M4 83 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 TCTAP57738 103 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 RPL36AP83881 106 aaKnown RBP2.44□□□□□ -2.02
MCF2-202ENST00000370573 SLC25A34Q6PIV7 304 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 KRTAP2-2Q9BYT5 123 aa2.44□□□□□ -2.02
MCF2-202ENST00000370573 A0A096LPF7 62 aa2.43□□□□□ -2.02
MCF2-202ENST00000370573 HSBP1O75506 76 aa2.43□□□□□ -2.02
MCF2-202ENST00000370573 FCER1GP30273 86 aa2.43□□□□□ -2.02
MCF2-202ENST00000370573 SMAGPQ0VAQ4 97 aa2.43□□□□□ -2.02
MCF2-202ENST00000370573 CHCHD7Q9BUK0 85 aa2.43□□□□□ -2.02
MCF2-202ENST00000370573 PPDPFQ9H3Y8 114 aa2.43□□□□□ -2.02
MCF2-202ENST00000370573 HSPB8Q9UJY1 196 aa2.43□□□□□ -2.02
MCF2-202ENST00000370573 TRAV10A0A0B4J240 114 aa2.43□□□□□ -2.02
MCF2-202ENST00000370573 OXTP01178 125 aa2.43□□□□□ -2.02
MCF2-202ENST00000370573 FABP2P12104 132 aa2.43□□□□□ -2.02
MCF2-202ENST00000370573 NDUFV3P56181 108 aaKnown RBP2.43□□□□□ -2.02
MCF2-202ENST00000370573 KRTDAPP60985 99 aa2.43□□□□□ -2.02
MCF2-202ENST00000370573 RPL39P62891 51 aaKnown RBP2.43□□□□□ -2.02
MCF2-202ENST00000370573 DAZ4Q86SG3 579 aaKnown RBP2.43□□□□□ -2.02
MCF2-202ENST00000370573 FAM104AQ969W3 186 aa2.43□□□□□ -2.02
MCF2-202ENST00000370573 KIR2DL4Q99706 377 aa2.43□□□□□ -2.02
MCF2-202ENST00000370573 DAZ3Q9NR90 486 aaKnown RBP2.43□□□□□ -2.02
MCF2-202ENST00000370573 CSMD3Q7Z407 3707 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 H3BNG1 76 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 K7EMI3 77 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 HBDP02042 147 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 ORMDL2Q53FV1 153 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 C20orf203Q8NBC4 194 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 TOMM6Q96B49 74 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 GTSF1LQ9H1H1 148 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 PLECQ15149 4684 aaKnown RBP2.42□□□□□ -2.02
MCF2-202ENST00000370573 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.42□□□□□ -2.02
MCF2-202ENST00000370573 IGKV2-29A2NJV5 120 aaPredicted RBP2.42□□□□□ -2.02
MCF2-202ENST00000370573 IGIPA6NJ69 53 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 TMEM262E9PQX1 116 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 C3orf79P0CE67 100 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 MPV17L2Q567V2 206 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 ADAMTSL4-AS1Q5T5F5 129 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 CEMP1Q6PRD7 247 aaPredicted RBP2.42□□□□□ -2.02
MCF2-202ENST00000370573 Q6Q795 121 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 LYPD5Q6UWN5 251 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 C2orf66Q6UXQ4 117 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 SPATA12Q7Z6I5 190 aa2.42□□□□□ -2.02
MCF2-202ENST00000370573 OPRPNQ99935 248 aaPredicted RBP2.42□□□□□ -2.02
MCF2-202ENST00000370573 ICOSQ9Y6W8 199 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms