RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 COX6A2Q02221 97 aa13.24□□□□□ -0.29
SNX27-202ENST00000368841 CYSRT1A8MQ03 144 aa13.24□□□□□ -0.29
SNX27-202ENST00000368841 PLA2G2AP14555 144 aa13.24□□□□□ -0.29
SNX27-202ENST00000368841 C10orf25Q5T742 122 aa13.24□□□□□ -0.29
SNX27-202ENST00000368841 DHRS4-AS1Q9P1J3 65 aa13.24□□□□□ -0.29
SNX27-202ENST00000368841 CCDC179H3BU77 68 aa13.24□□□□□ -0.29
SNX27-202ENST00000368841 SPINK1P00995 79 aa13.23□□□□□ -0.29
SNX27-202ENST00000368841 IGHV6-1A0A0B4J1U7 121 aa13.23□□□□□ -0.29
SNX27-202ENST00000368841 AVPP01185 164 aa13.23□□□□□ -0.29
SNX27-202ENST00000368841 ZNF73O43830 326 aaPredicted RBP13.23□□□□□ -0.29
SNX27-202ENST00000368841 C6orf223Q8N319 242 aa13.22□□□□□ -0.29
SNX27-202ENST00000368841 IGLV5-52A0A0A0MRZ9 124 aa13.22□□□□□ -0.29
SNX27-202ENST00000368841 NUPR2A6NF83 97 aa13.22□□□□□ -0.29
SNX27-202ENST00000368841 Q8N9L7 120 aa13.22□□□□□ -0.29
SNX27-202ENST00000368841 UNQ6190/PRO20217Q6UXQ8 127 aa13.21□□□□□ -0.29
SNX27-202ENST00000368841 ZFHX2Q9C0A1 2572 aaPredicted RBP13.21□□□□□ -0.3
SNX27-202ENST00000368841 EXPH5Q8NEV8 1989 aa13.21□□□□□ -0.3
SNX27-202ENST00000368841 CACNA1HO95180 2353 aa13.2□□□□□ -0.3
SNX27-202ENST00000368841 FAM19A3Q7Z5A8 133 aa13.19□□□□□ -0.3
SNX27-202ENST00000368841 HCFC1P51610 2035 aa13.19□□□□□ -0.3
SNX27-202ENST00000368841 EBI3Q14213 229 aa13.18□□□□□ -0.3
SNX27-202ENST00000368841 TIMM17BO60830 172 aa13.18□□□□□ -0.3
SNX27-202ENST00000368841 LINC01556Q5JQF7 62 aa13.18□□□□□ -0.3
SNX27-202ENST00000368841 TECTAO75443 2155 aa13.18□□□□□ -0.3
SNX27-202ENST00000368841 PCOTHQ58A44 107 aa13.17□□□□□ -0.3
SNX27-202ENST00000368841 Q6Q795 121 aa13.16□□□□□ -0.3
SNX27-202ENST00000368841 C2orf91Q6ZV80 131 aa13.16□□□□□ -0.3
SNX27-202ENST00000368841 A0A087WYN8 130 aa13.16□□□□□ -0.3
SNX27-202ENST00000368841 ATP5EP2Q5VTU8 51 aa13.16□□□□□ -0.3
SNX27-202ENST00000368841 SOSTDC1Q6X4U4 206 aa13.16□□□□□ -0.3
SNX27-202ENST00000368841 REG3GQ6UW15 175 aa13.16□□□□□ -0.3
SNX27-202ENST00000368841 C1orf137Q5JT78 98 aa13.15□□□□□ -0.3
SNX27-202ENST00000368841 Q6ZTC4 211 aa13.14□□□□□ -0.31
SNX27-202ENST00000368841 CDC42SE2Q9NRR3 84 aa13.14□□□□□ -0.31
SNX27-202ENST00000368841 MRGPRG-AS1Q2M3A8 158 aa13.14□□□□□ -0.31
SNX27-202ENST00000368841 IGLV4-60A0A075B6I1 120 aa13.14□□□□□ -0.31
SNX27-202ENST00000368841 PYGO1Q9Y3Y4 419 aa13.14□□□□□ -0.31
SNX27-202ENST00000368841 IGLV1-40P01703 118 aa13.13□□□□□ -0.31
SNX27-202ENST00000368841 TRBV10-3A0A0K0K1G6 114 aa13.13□□□□□ -0.31
SNX27-202ENST00000368841 LINC00694P0DN24 101 aa13.13□□□□□ -0.31
SNX27-202ENST00000368841 Q8N6K4 173 aa13.13□□□□□ -0.31
SNX27-202ENST00000368841 PRR14LQ5THK1 2151 aa13.13□□□□□ -0.31
SNX27-202ENST00000368841 ARHGAP32A7KAX9 2087 aa13.13□□□□□ -0.31
SNX27-202ENST00000368841 ZNF580Q9UK33 172 aa13.12□□□□□ -0.31
SNX27-202ENST00000368841 KLLNB2CW77 178 aa13.12□□□□□ -0.31
SNX27-202ENST00000368841 LST1O00453 97 aa13.12□□□□□ -0.31
SNX27-202ENST00000368841 SERP2Q8N6R1 65 aa13.12□□□□□ -0.31
SNX27-202ENST00000368841 WNK1Q9H4A3 2382 aa13.11□□□□□ -0.31
SNX27-202ENST00000368841 A0A087WVE0 104 aa13.11□□□□□ -0.31
SNX27-202ENST00000368841 A8MTW9 85 aa13.11□□□□□ -0.31
SNX27-202ENST00000368841 ATG2AQ2TAZ0 1938 aa13.1□□□□□ -0.31
SNX27-202ENST00000368841 COL5A1P20908 1838 aaPredicted RBP13.1□□□□□ -0.31
SNX27-202ENST00000368841 SBSPONQ8IVN8 264 aa13.1□□□□□ -0.31
SNX27-202ENST00000368841 LINC00208Q96KT6 92 aa13.09□□□□□ -0.31
SNX27-202ENST00000368841 COX17Q14061 63 aa13.08□□□□□ -0.32
SNX27-202ENST00000368841 LINC00474Q9P2X8 69 aa13.08□□□□□ -0.32
SNX27-202ENST00000368841 Q8IZM0 81 aa13.08□□□□□ -0.32
SNX27-202ENST00000368841 XGP55808 180 aa13.07□□□□□ -0.32
SNX27-202ENST00000368841 EML5Q05BV3 1969 aa13.07□□□□□ -0.32
SNX27-202ENST00000368841 BEAN1Q3B7T3 259 aa13.06□□□□□ -0.32
SNX27-202ENST00000368841 RPL28P46779 137 aaKnown RBP13.06□□□□□ -0.32
SNX27-202ENST00000368841 LINC01547P58512 204 aaPredicted RBP13.06□□□□□ -0.32
SNX27-202ENST00000368841 ODF3L2Q3SX64 289 aa13.06□□□□□ -0.32
SNX27-202ENST00000368841 MRPS36P82909 103 aaKnown RBP13.06□□□□□ -0.32
SNX27-202ENST00000368841 Q6ZSN1 163 aa13.06□□□□□ -0.32
SNX27-202ENST00000368841 PTPRQQ9UMZ3 2332 aa13.06□□□□□ -0.32
SNX27-202ENST00000368841 TRBV7-6A0A0J9YX20 115 aa13.05□□□□□ -0.32
SNX27-202ENST00000368841 Q9BRP9 147 aa13.05□□□□□ -0.32
SNX27-202ENST00000368841 POLR2KP53803 58 aaKnown RBP13.05□□□□□ -0.32
SNX27-202ENST00000368841 TSPEAR-AS2P59090 65 aa13.05□□□□□ -0.32
SNX27-202ENST00000368841 LINC00242Q5T6M2 205 aa13.05□□□□□ -0.32
SNX27-202ENST00000368841 V9GYY9 64 aa13.05□□□□□ -0.32
SNX27-202ENST00000368841 Q8N814 137 aa13.04□□□□□ -0.32
SNX27-202ENST00000368841 CHCHD7Q9BUK0 85 aa13.04□□□□□ -0.32
SNX27-202ENST00000368841 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.03□□□□□ -0.32
SNX27-202ENST00000368841 YPEL4Q96NS1 127 aa13.03□□□□□ -0.32
SNX27-202ENST00000368841 FAM208BQ5VWN6 2430 aa13.02□□□□□ -0.33
SNX27-202ENST00000368841 HIVEP2P31629 2446 aa13.02□□□□□ -0.33
SNX27-202ENST00000368841 PSPHP1O15172 72 aa13.02□□□□□ -0.33
SNX27-202ENST00000368841 NTM-AS1Q6ZSK4 140 aa13.02□□□□□ -0.33
SNX27-202ENST00000368841 Q9UF83 564 aa13.02□□□□□ -0.33
SNX27-202ENST00000368841 PLXNB1O43157 2135 aa13.01□□□□□ -0.33
SNX27-202ENST00000368841 PRYO14603 147 aa13.01□□□□□ -0.33
SNX27-202ENST00000368841 FHL2Q14192 279 aa13.01□□□□□ -0.33
SNX27-202ENST00000368841 PRLHP81277 87 aa13.01□□□□□ -0.33
SNX27-202ENST00000368841 ADAMTSL4-AS1Q5T5F5 129 aa13.01□□□□□ -0.33
SNX27-202ENST00000368841 SMIM1B2RUZ4 78 aa13□□□□□ -0.33
SNX27-202ENST00000368841 COX7CP15954 63 aa13□□□□□ -0.33
SNX27-202ENST00000368841 IGIPA6NJ69 53 aa13□□□□□ -0.33
SNX27-202ENST00000368841 FSTL3O95633 263 aa12.98□□□□□ -0.33
SNX27-202ENST00000368841 LINC00575Q6W349 94 aa12.98□□□□□ -0.33
SNX27-202ENST00000368841 NDUFC1O43677 76 aa12.98□□□□□ -0.33
SNX27-202ENST00000368841 OTOGLQ3ZCN5 2332 aa12.98□□□□□ -0.33
SNX27-202ENST00000368841 MUC6Q6W4X9 2439 aa12.97□□□□□ -0.33
SNX27-202ENST00000368841 ATP5EP56381 51 aaPredicted RBP12.96□□□□□ -0.33
SNX27-202ENST00000368841 C1orf134Q5TEV5 83 aa12.96□□□□□ -0.33
SNX27-202ENST00000368841 CRYGAP11844 174 aa12.96□□□□□ -0.33
SNX27-202ENST00000368841 PTPRSQ13332 1948 aa12.96□□□□□ -0.33
SNX27-202ENST00000368841 CPAMD8Q8IZJ3 1885 aa12.95□□□□□ -0.34
SNX27-202ENST00000368841 A0A087WSZ3 146 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 271.2 ms