RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 IFI27P40305 119 aaPredicted RBP11.97□□□□□ -0.49
CKS1B-203ENST00000368439 HNRNPA3P51991 378 aaKnown RBP11.97□□□□□ -0.49
CKS1B-203ENST00000368439 DPH3Q96FX2 82 aa11.97□□□□□ -0.49
CKS1B-203ENST00000368439 IGKV2-24A0A0C4DH68 120 aa11.96□□□□□ -0.49
CKS1B-203ENST00000368439 KRTAP29-1A8MX34 341 aaPredicted RBP11.96□□□□□ -0.49
CKS1B-203ENST00000368439 IFITM10A6NMD0 228 aa11.95□□□□□ -0.5
CKS1B-203ENST00000368439 MAJINQ3KP22 176 aa11.95□□□□□ -0.5
CKS1B-203ENST00000368439 Q6ZRU5 148 aa11.95□□□□□ -0.5
CKS1B-203ENST00000368439 KIAA1644Q3SXP7 199 aa11.94□□□□□ -0.5
CKS1B-203ENST00000368439 C2orf66Q6UXQ4 117 aa11.94□□□□□ -0.5
CKS1B-203ENST00000368439 C2orf48Q96LS8 159 aa11.94□□□□□ -0.5
CKS1B-203ENST00000368439 CARHSP1Q9Y2V2 147 aaKnown RBP11.94□□□□□ -0.5
CKS1B-203ENST00000368439 K7EMI3 77 aa11.93□□□□□ -0.5
CKS1B-203ENST00000368439 APOMO95445 188 aa11.93□□□□□ -0.5
CKS1B-203ENST00000368439 ORMDL2Q53FV1 153 aa11.93□□□□□ -0.5
CKS1B-203ENST00000368439 TMEM141Q96I45 108 aa11.93□□□□□ -0.5
CKS1B-203ENST00000368439 LINC00242Q5T6M2 205 aa11.92□□□□□ -0.5
CKS1B-203ENST00000368439 STPG4Q8N801 248 aa11.92□□□□□ -0.5
CKS1B-203ENST00000368439 OR10D4PQ8NGN7 298 aa11.92□□□□□ -0.5
CKS1B-203ENST00000368439 NXT2Q9NPJ8 142 aaKnown RBP11.92□□□□□ -0.5
CKS1B-203ENST00000368439 CYSLTR1Q9Y271 337 aa11.92□□□□□ -0.5
CKS1B-203ENST00000368439 IGIPA6NJ69 53 aa11.91□□□□□ -0.5
CKS1B-203ENST00000368439 SPAG11BQ08648 103 aa11.91□□□□□ -0.5
CKS1B-203ENST00000368439 LINC00173Q6ZV60 143 aa11.91□□□□□ -0.5
CKS1B-203ENST00000368439 CAMK2N2Q96S95 79 aa11.91□□□□□ -0.5
CKS1B-203ENST00000368439 GNB1LQ9BYB4 327 aa11.91□□□□□ -0.5
CKS1B-203ENST00000368439 PKIGQ9Y2B9 76 aa11.91□□□□□ -0.5
CKS1B-203ENST00000368439 S100PP25815 95 aa11.9□□□□□ -0.5
CKS1B-203ENST00000368439 ZC2HC1BQ5TFG8 222 aa11.9□□□□□ -0.5
CKS1B-203ENST00000368439 AMELXQ99217 191 aa11.9□□□□□ -0.5
CKS1B-203ENST00000368439 LINC00474Q9P2X8 69 aa11.9□□□□□ -0.5
CKS1B-203ENST00000368439 NPSP0C0P6 89 aa11.89□□□□□ -0.51
CKS1B-203ENST00000368439 UBE2D1P51668 147 aa11.89□□□□□ -0.51
CKS1B-203ENST00000368439 PTTG1IPP53801 180 aa11.89□□□□□ -0.51
CKS1B-203ENST00000368439 RHEBQ15382 184 aa11.89□□□□□ -0.51
CKS1B-203ENST00000368439 TEX43Q6ZNM6 134 aa11.89□□□□□ -0.51
CKS1B-203ENST00000368439 ORAOV1Q8WV07 137 aa11.89□□□□□ -0.51
CKS1B-203ENST00000368439 A0A087WZ39 114 aa11.88□□□□□ -0.51
CKS1B-203ENST00000368439 LOC107984640A0A0U1RRK4 108 aa11.88□□□□□ -0.51
CKS1B-203ENST00000368439 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.88□□□□□ -0.51
CKS1B-203ENST00000368439 J3QL48 77 aa11.88□□□□□ -0.51
CKS1B-203ENST00000368439 ALKBH7Q9BT30 221 aaPredicted RBP11.88□□□□□ -0.51
CKS1B-203ENST00000368439 TGIF2-C20orf24A0A0A6YYL0 155 aa11.87□□□□□ -0.51
CKS1B-203ENST00000368439 RNF151Q2KHN1 245 aa11.87□□□□□ -0.51
CKS1B-203ENST00000368439 RPS10P5Q9NQ39 176 aa11.87□□□□□ -0.51
CKS1B-203ENST00000368439 LINC01546A6NGU7 62 aa11.86□□□□□ -0.51
CKS1B-203ENST00000368439 F8WDY8 70 aa11.86□□□□□ -0.51
CKS1B-203ENST00000368439 OXTP01178 125 aa11.86□□□□□ -0.51
CKS1B-203ENST00000368439 KIAA0087Q14695 138 aa11.86□□□□□ -0.51
CKS1B-203ENST00000368439 COX19Q49B96 90 aa11.86□□□□□ -0.51
CKS1B-203ENST00000368439 FAM19A3Q7Z5A8 133 aa11.86□□□□□ -0.51
CKS1B-203ENST00000368439 TOMM6Q96B49 74 aa11.86□□□□□ -0.51
CKS1B-203ENST00000368439 MRPL35Q9NZE8 188 aaKnown RBP11.86□□□□□ -0.51
CKS1B-203ENST00000368439 A0A0J9YXV3 536 aa11.85□□□□□ -0.51
CKS1B-203ENST00000368439 GAGE2BQ13066 116 aa11.85□□□□□ -0.51
CKS1B-203ENST00000368439 C10orf25Q5T742 122 aa11.85□□□□□ -0.51
CKS1B-203ENST00000368439 C7orf33Q8WU49 177 aa11.85□□□□□ -0.51
CKS1B-203ENST00000368439 VCX2Q9H322 139 aa11.85□□□□□ -0.51
CKS1B-203ENST00000368439 Q6ZN92 141 aa11.84□□□□□ -0.51
CKS1B-203ENST00000368439 TIMM17AQ99595 171 aa11.84□□□□□ -0.51
CKS1B-203ENST00000368439 C2orf88Q9BSF0 95 aa11.84□□□□□ -0.51
CKS1B-203ENST00000368439 MT-ND6P03923 174 aa11.83□□□□□ -0.52
CKS1B-203ENST00000368439 LINC01561Q8N1V8 128 aa11.83□□□□□ -0.52
CKS1B-203ENST00000368439 MRPL18Q9H0U6 180 aaKnown RBP11.83□□□□□ -0.52
CKS1B-203ENST00000368439 A0A1W2PNN7 141 aa11.82□□□□□ -0.52
CKS1B-203ENST00000368439 NDUFA1O15239 70 aa11.82□□□□□ -0.52
CKS1B-203ENST00000368439 G0S2P27469 103 aa11.82□□□□□ -0.52
CKS1B-203ENST00000368439 UNQ6190/PRO20217Q6UXQ8 127 aa11.82□□□□□ -0.52
CKS1B-203ENST00000368439 C6orf48Q9UBA6 75 aa11.82□□□□□ -0.52
CKS1B-203ENST00000368439 PRR3P79522 188 aaKnown RBP11.81□□□□□ -0.52
CKS1B-203ENST00000368439 RPL18AQ02543 176 aaKnown RBP11.8□□□□□ -0.52
CKS1B-203ENST00000368439 FABP9Q0Z7S8 132 aa11.8□□□□□ -0.52
CKS1B-203ENST00000368439 ERASQ7Z444 233 aa11.8□□□□□ -0.52
CKS1B-203ENST00000368439 APOC3P02656 99 aa11.79□□□□□ -0.52
CKS1B-203ENST00000368439 TLX1NBP0CAT3 122 aa11.79□□□□□ -0.52
CKS1B-203ENST00000368439 PAPPA-AS1Q5QFB9 102 aa11.79□□□□□ -0.52
CKS1B-203ENST00000368439 C9orf116Q5BN46 136 aaPredicted RBP11.78□□□□□ -0.52
CKS1B-203ENST00000368439 Q6ZRP5 223 aa11.78□□□□□ -0.52
CKS1B-203ENST00000368439 C2orf82Q6UX34 121 aa11.77□□□□□ -0.53
CKS1B-203ENST00000368439 SCGB3A1Q96QR1 104 aa11.77□□□□□ -0.53
CKS1B-203ENST00000368439 URB1-AS1Q96HZ7 61 aa11.76□□□□□ -0.53
CKS1B-203ENST00000368439 CDKN2A-AS1Q9UH64 79 aa11.76□□□□□ -0.53
CKS1B-203ENST00000368439 HMCN2Q8NDA2 5059 aa11.76□□□□□ -0.53
CKS1B-203ENST00000368439 TNXBP22105 4242 aa11.75□□□□□ -0.53
CKS1B-203ENST00000368439 LINC01549A6NIU2 74 aa11.75□□□□□ -0.53
CKS1B-203ENST00000368439 SNAPINO95295 136 aa11.75□□□□□ -0.53
CKS1B-203ENST00000368439 HERVK_113P63121 156 aa11.75□□□□□ -0.53
CKS1B-203ENST00000368439 SEC11AP67812 179 aa11.75□□□□□ -0.53
CKS1B-203ENST00000368439 SVBPQ8N300 66 aa11.75□□□□□ -0.53
CKS1B-203ENST00000368439 TRBV30A0A0K0K1B3 111 aa11.74□□□□□ -0.53
CKS1B-203ENST00000368439 MT1HL1P0DM35 61 aa11.74□□□□□ -0.53
CKS1B-203ENST00000368439 FA2HQ7L5A8 372 aa11.74□□□□□ -0.53
CKS1B-203ENST00000368439 TRAPPC1Q9Y5R8 145 aa11.74□□□□□ -0.53
CKS1B-203ENST00000368439 A0A096LNJ9 63 aa11.73□□□□□ -0.53
CKS1B-203ENST00000368439 NDUFA5Q16718 116 aa11.73□□□□□ -0.53
CKS1B-203ENST00000368439 Q8IZM0 81 aa11.73□□□□□ -0.53
CKS1B-203ENST00000368439 C18orf32Q8TCD1 76 aa11.73□□□□□ -0.53
CKS1B-203ENST00000368439 YPEL4Q96NS1 127 aa11.73□□□□□ -0.53
CKS1B-203ENST00000368439 FAM168BA1KXE4 195 aa11.72□□□□□ -0.53
CKS1B-203ENST00000368439 KRTAP7-1Q8IUC3 87 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms