RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 PRM2P04554 102 aa11.27□□□□□ -0.61
PTPRO-202ENST00000348962 NUP210LQ5VU65 1888 aa11.27□□□□□ -0.61
PTPRO-202ENST00000348962 SS18L2Q9UHA2 77 aa11.27□□□□□ -0.61
PTPRO-202ENST00000348962 POLR2KP53803 58 aaKnown RBP11.27□□□□□ -0.61
PTPRO-202ENST00000348962 DHRS4-AS1Q9P1J3 65 aa11.26□□□□□ -0.61
PTPRO-202ENST00000348962 BRI3O95415 125 aa11.26□□□□□ -0.61
PTPRO-202ENST00000348962 MUC7Q8TAX7 377 aa11.26□□□□□ -0.61
PTPRO-202ENST00000348962 UBE2D4Q9Y2X8 147 aa11.25□□□□□ -0.61
PTPRO-202ENST00000348962 CASC2Q6XLA1 102 aa11.25□□□□□ -0.61
PTPRO-202ENST00000348962 RETNQ9HD89 108 aa11.24□□□□□ -0.61
PTPRO-202ENST00000348962 TANC2Q9HCD6 1990 aa11.24□□□□□ -0.61
PTPRO-202ENST00000348962 MTORP42345 2549 aa11.24□□□□□ -0.61
PTPRO-202ENST00000348962 TCL1BO95988 128 aa11.24□□□□□ -0.61
PTPRO-202ENST00000348962 LINC00643Q86TS7 51 aa11.24□□□□□ -0.61
PTPRO-202ENST00000348962 NRACQ8N912 160 aa11.24□□□□□ -0.61
PTPRO-202ENST00000348962 WDR87Q6ZQQ6 2873 aa11.24□□□□□ -0.61
PTPRO-202ENST00000348962 TIMM17BO60830 172 aa11.24□□□□□ -0.61
PTPRO-202ENST00000348962 PPDPFQ9H3Y8 114 aa11.23□□□□□ -0.61
PTPRO-202ENST00000348962 C1orf158Q8N1D5 194 aa11.22□□□□□ -0.61
PTPRO-202ENST00000348962 COX17Q14061 63 aa11.21□□□□□ -0.61
PTPRO-202ENST00000348962 PTH2Q96A98 100 aa11.21□□□□□ -0.61
PTPRO-202ENST00000348962 CCKP06307 115 aa11.21□□□□□ -0.62
PTPRO-202ENST00000348962 Q8IZM0 81 aa11.21□□□□□ -0.62
PTPRO-202ENST00000348962 CDC42SE2Q9NRR3 84 aa11.21□□□□□ -0.62
PTPRO-202ENST00000348962 LRP4O75096 1905 aa11.21□□□□□ -0.62
PTPRO-202ENST00000348962 SLPIP03973 132 aa11.2□□□□□ -0.62
PTPRO-202ENST00000348962 SPINK6Q6UWN8 80 aa11.2□□□□□ -0.62
PTPRO-202ENST00000348962 Q6ZTC4 211 aa11.2□□□□□ -0.62
PTPRO-202ENST00000348962 POLQO75417 2590 aa11.2□□□□□ -0.62
PTPRO-202ENST00000348962 USP17L23D6RBM5 183 aa11.19□□□□□ -0.62
PTPRO-202ENST00000348962 PLAC8L1A1L4L8 177 aa11.19□□□□□ -0.62
PTPRO-202ENST00000348962 CYSRT1A8MQ03 144 aa11.19□□□□□ -0.62
PTPRO-202ENST00000348962 Q6ZQY7 126 aa11.19□□□□□ -0.62
PTPRO-202ENST00000348962 CNFNQ9BYD5 112 aa11.19□□□□□ -0.62
PTPRO-202ENST00000348962 A8MZ25 164 aa11.18□□□□□ -0.62
PTPRO-202ENST00000348962 EDN2P20800 178 aa11.18□□□□□ -0.62
PTPRO-202ENST00000348962 NHLRC4P0CG21 123 aaPredicted RBP11.18□□□□□ -0.62
PTPRO-202ENST00000348962 COL5A1P20908 1838 aaPredicted RBP11.18□□□□□ -0.62
PTPRO-202ENST00000348962 B5MCH6 92 aa11.18□□□□□ -0.62
PTPRO-202ENST00000348962 HCFC1P51610 2035 aa11.17□□□□□ -0.62
PTPRO-202ENST00000348962 TRBV30A0A0K0K1B3 111 aa11.17□□□□□ -0.62
PTPRO-202ENST00000348962 EGFEM1PQ0D2K5 195 aa11.17□□□□□ -0.62
PTPRO-202ENST00000348962 RPL37AP8A6NKH3 93 aa11.17□□□□□ -0.62
PTPRO-202ENST00000348962 MAPKAPK5-AS1Q8N8E1 139 aa11.16□□□□□ -0.62
PTPRO-202ENST00000348962 RPL28P46779 137 aaKnown RBP11.16□□□□□ -0.62
PTPRO-202ENST00000348962 MRPS12O15235 138 aaKnown RBP11.15□□□□□ -0.62
PTPRO-202ENST00000348962 TRIAP1O43715 76 aa11.15□□□□□ -0.62
PTPRO-202ENST00000348962 ZNF73O43830 326 aaPredicted RBP11.15□□□□□ -0.62
PTPRO-202ENST00000348962 ATP5EP2Q5VTU8 51 aa11.15□□□□□ -0.62
PTPRO-202ENST00000348962 TP73-AS1Q9UF72 201 aa11.14□□□□□ -0.63
PTPRO-202ENST00000348962 IGLV5-52A0A0A0MRZ9 124 aa11.14□□□□□ -0.63
PTPRO-202ENST00000348962 FSHBP01225 129 aa11.12□□□□□ -0.63
PTPRO-202ENST00000348962 M0QXV9 152 aa11.12□□□□□ -0.63
PTPRO-202ENST00000348962 FHL2Q14192 279 aa11.12□□□□□ -0.63
PTPRO-202ENST00000348962 C1orf134Q5TEV5 83 aa11.12□□□□□ -0.63
PTPRO-202ENST00000348962 EPG5Q9HCE0 2579 aa11.12□□□□□ -0.63
PTPRO-202ENST00000348962 IGLV9-49A0A0B4J1Y8 123 aa11.12□□□□□ -0.63
PTPRO-202ENST00000348962 UNQ6190/PRO20217Q6UXQ8 127 aa11.12□□□□□ -0.63
PTPRO-202ENST00000348962 SCXQ7RTU7 201 aa11.12□□□□□ -0.63
PTPRO-202ENST00000348962 RNASE8Q8TDE3 154 aaKnown RBP11.11□□□□□ -0.63
PTPRO-202ENST00000348962 TEX49A0A1B0GTD5 131 aa11.11□□□□□ -0.63
PTPRO-202ENST00000348962 C3orf84H3BNL1 204 aa11.11□□□□□ -0.63
PTPRO-202ENST00000348962 LINC00242Q5T6M2 205 aa11.11□□□□□ -0.63
PTPRO-202ENST00000348962 WFDC10BQ8IUB3 73 aa11.11□□□□□ -0.63
PTPRO-202ENST00000348962 HRCT1Q6UXD1 115 aa11.1□□□□□ -0.63
PTPRO-202ENST00000348962 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.1□□□□□ -0.63
PTPRO-202ENST00000348962 C6orf223Q8N319 242 aa11.09□□□□□ -0.63
PTPRO-202ENST00000348962 GAS8-AS1O95177 125 aa11.08□□□□□ -0.64
PTPRO-202ENST00000348962 IGIPA6NJ69 53 aa11.08□□□□□ -0.64
PTPRO-202ENST00000348962 SMIM11BQ8TCY0 68 aa11.08□□□□□ -0.64
PTPRO-202ENST00000348962 POM121L12Q8N7R1 296 aa11.07□□□□□ -0.64
PTPRO-202ENST00000348962 ENHOQ6UWT2 76 aa11.06□□□□□ -0.64
PTPRO-202ENST00000348962 BEAN1Q3B7T3 259 aa11.06□□□□□ -0.64
PTPRO-202ENST00000348962 SDIM1Q6ZPB5 146 aa11.06□□□□□ -0.64
PTPRO-202ENST00000348962 PTPRSQ13332 1948 aa11.05□□□□□ -0.64
PTPRO-202ENST00000348962 CSDC2Q9Y534 153 aaKnown RBP11.05□□□□□ -0.64
PTPRO-202ENST00000348962 F8WDY8 70 aa11.05□□□□□ -0.64
PTPRO-202ENST00000348962 C10orf25Q5T742 122 aa11.05□□□□□ -0.64
PTPRO-202ENST00000348962 IGLV4-60A0A075B6I1 120 aa11.05□□□□□ -0.64
PTPRO-202ENST00000348962 G3V4G9 280 aa11.04□□□□□ -0.64
PTPRO-202ENST00000348962 FHL3Q13643 280 aa11.04□□□□□ -0.64
PTPRO-202ENST00000348962 C20orf197Q8N268 126 aa11.04□□□□□ -0.64
PTPRO-202ENST00000348962 Q8N2B8 174 aa11.04□□□□□ -0.64
PTPRO-202ENST00000348962 FLNBO75369 2602 aaKnown RBP11.04□□□□□ -0.64
PTPRO-202ENST00000348962 SMIM1B2RUZ4 78 aa11.03□□□□□ -0.64
PTPRO-202ENST00000348962 LYPD5Q6UWN5 251 aa11.03□□□□□ -0.64
PTPRO-202ENST00000348962 ACANP16112 2415 aa11.03□□□□□ -0.64
PTPRO-202ENST00000348962 LST1O00453 97 aa11.03□□□□□ -0.64
PTPRO-202ENST00000348962 A0A1B0GUV1 79 aa11.02□□□□□ -0.64
PTPRO-202ENST00000348962 WFDC13Q8IUB5 93 aa11.02□□□□□ -0.64
PTPRO-202ENST00000348962 NDUFV3P56181 108 aaKnown RBP11.02□□□□□ -0.65
PTPRO-202ENST00000348962 REG3GQ6UW15 175 aa11.02□□□□□ -0.65
PTPRO-202ENST00000348962 C3orf22Q8N5N4 141 aa11.02□□□□□ -0.65
PTPRO-202ENST00000348962 COX8CQ7Z4L0 72 aa11.02□□□□□ -0.65
PTPRO-202ENST00000348962 LINC00694P0DN24 101 aa11□□□□□ -0.65
PTPRO-202ENST00000348962 YPEL4Q96NS1 127 aa11□□□□□ -0.65
PTPRO-202ENST00000348962 RAI1Q7Z5J4 1906 aaPredicted RBP11□□□□□ -0.65
PTPRO-202ENST00000348962 COX6A2Q02221 97 aa11□□□□□ -0.65
PTPRO-202ENST00000348962 C2orf48Q96LS8 159 aa11□□□□□ -0.65
PTPRO-202ENST00000348962 J3KT08 172 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms