RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 LY6G6DO95868 133 aa8.84□□□□□ -0.99
TRAF3-201ENST00000347662 BEAN1Q3B7T3 259 aa8.84□□□□□ -0.99
TRAF3-201ENST00000347662 RAI1Q7Z5J4 1906 aaPredicted RBP8.84□□□□□ -0.99
TRAF3-201ENST00000347662 TRBV6-5A0A0K0K1A5 114 aa8.84□□□□□ -0.99
TRAF3-201ENST00000347662 SMIM9A6NGZ8 99 aa8.84□□□□□ -1
TRAF3-201ENST00000347662 MT-ATP8P03928 68 aa8.84□□□□□ -1
TRAF3-201ENST00000347662 CFAP126Q5VTH2 177 aa8.84□□□□□ -1
TRAF3-201ENST00000347662 C20orf173Q96LM9 149 aa8.84□□□□□ -1
TRAF3-201ENST00000347662 SHISA2Q6UWI4 295 aa8.83□□□□□ -1
TRAF3-201ENST00000347662 F8P00451 2351 aa8.83□□□□□ -1
TRAF3-201ENST00000347662 C20orf203Q8NBC4 194 aa8.83□□□□□ -1
TRAF3-201ENST00000347662 SOSTDC1Q6X4U4 206 aa8.83□□□□□ -1
TRAF3-201ENST00000347662 HIGD1BQ9P298 99 aa8.83□□□□□ -1
TRAF3-201ENST00000347662 A0A0J9YX75 114 aa8.83□□□□□ -1
TRAF3-201ENST00000347662 IGLV1-47P01700 117 aa8.83□□□□□ -1
TRAF3-201ENST00000347662 TDRG1Q3Y452 100 aa8.83□□□□□ -1
TRAF3-201ENST00000347662 E7EUB6 86 aa8.83□□□□□ -1
TRAF3-201ENST00000347662 EBI3Q14213 229 aa8.83□□□□□ -1
TRAF3-201ENST00000347662 LINC00208Q96KT6 92 aa8.83□□□□□ -1
TRAF3-201ENST00000347662 KPRPQ5T749 579 aaPredicted RBP8.83□□□□□ -1
TRAF3-201ENST00000347662 ANKRD17O75179 2603 aaKnown RBP8.82□□□□□ -1
TRAF3-201ENST00000347662 RPL28P46779 137 aaKnown RBP8.82□□□□□ -1
TRAF3-201ENST00000347662 CDPF1Q6NVV7 123 aa8.82□□□□□ -1
TRAF3-201ENST00000347662 IGLV4-69A0A075B6H9 119 aa8.82□□□□□ -1
TRAF3-201ENST00000347662 Q6ZQY7 126 aa8.82□□□□□ -1
TRAF3-201ENST00000347662 A0A1B0GXF2 115 aa8.82□□□□□ -1
TRAF3-201ENST00000347662 KRTAP27-1Q3LI81 207 aa8.82□□□□□ -1
TRAF3-201ENST00000347662 M0R378 163 aa8.81□□□□□ -1
TRAF3-201ENST00000347662 CLUHP3Q96NS8 147 aa8.81□□□□□ -1
TRAF3-201ENST00000347662 COA6Q5JTJ3 125 aaKnown RBP8.81□□□□□ -1
TRAF3-201ENST00000347662 LST1O00453 97 aa8.81□□□□□ -1
TRAF3-201ENST00000347662 TRBV6-8A0A0A6YYG3 113 aa8.81□□□□□ -1
TRAF3-201ENST00000347662 PSPHP1O15172 72 aa8.81□□□□□ -1
TRAF3-201ENST00000347662 H7C423 109 aa8.8□□□□□ -1
TRAF3-201ENST00000347662 BBC3Q96PG8 261 aaPredicted RBP8.8□□□□□ -1
TRAF3-201ENST00000347662 CDKN2A-AS1Q9UH64 79 aa8.8□□□□□ -1
TRAF3-201ENST00000347662 Q8N976 141 aa8.8□□□□□ -1
TRAF3-201ENST00000347662 SMR3AQ99954 134 aa8.8□□□□□ -1
TRAF3-201ENST00000347662 IBA57-AS1B1ANH7 110 aa8.8□□□□□ -1
TRAF3-201ENST00000347662 SPINT4Q6UDR6 99 aa8.79□□□□□ -1
TRAF3-201ENST00000347662 TNFRSF13BO14836 293 aaPredicted RBP8.79□□□□□ -1
TRAF3-201ENST00000347662 SBSPONQ8IVN8 264 aa8.79□□□□□ -1
TRAF3-201ENST00000347662 PLA2G2EQ9NZK7 142 aa8.79□□□□□ -1
TRAF3-201ENST00000347662 CRYGAP11844 174 aa8.79□□□□□ -1
TRAF3-201ENST00000347662 LRRC75A-AS1Q8N1F1 130 aa8.79□□□□□ -1
TRAF3-201ENST00000347662 EML5Q05BV3 1969 aa8.79□□□□□ -1
TRAF3-201ENST00000347662 M0QXV9 152 aa8.79□□□□□ -1
TRAF3-201ENST00000347662 LINC01556Q5JQF7 62 aa8.79□□□□□ -1
TRAF3-201ENST00000347662 C7orf65Q6ZTY9 151 aa8.79□□□□□ -1
TRAF3-201ENST00000347662 NEXN-AS1Q8NBZ9 246 aa8.78□□□□□ -1
TRAF3-201ENST00000347662 NUPR1O60356 82 aa8.77□□□□□ -1
TRAF3-201ENST00000347662 Q6ZSR3 168 aa8.77□□□□□ -1
TRAF3-201ENST00000347662 LINC00308Q8TCZ7 52 aa8.77□□□□□ -1
TRAF3-201ENST00000347662 RNASE8Q8TDE3 154 aaKnown RBP8.77□□□□□ -1
TRAF3-201ENST00000347662 USP24Q9UPU5 2620 aa8.77□□□□□ -1.01
TRAF3-201ENST00000347662 CDSNQ15517 529 aa8.77□□□□□ -1.01
TRAF3-201ENST00000347662 C1orf137Q5JT78 98 aa8.77□□□□□ -1.01
TRAF3-201ENST00000347662 LINC01547P58512 204 aaPredicted RBP8.77□□□□□ -1.01
TRAF3-201ENST00000347662 LRP4O75096 1905 aa8.77□□□□□ -1.01
TRAF3-201ENST00000347662 PATE2Q6UY27 113 aa8.77□□□□□ -1.01
TRAF3-201ENST00000347662 ADAMTS20P59510 1910 aa8.77□□□□□ -1.01
TRAF3-201ENST00000347662 C19orf71A6NCJ1 209 aa8.76□□□□□ -1.01
TRAF3-201ENST00000347662 TRIAP1O43715 76 aa8.76□□□□□ -1.01
TRAF3-201ENST00000347662 Q6YL49 198 aa8.76□□□□□ -1.01
TRAF3-201ENST00000347662 IGKV2D-30A0A075B6S6 120 aa8.75□□□□□ -1.01
TRAF3-201ENST00000347662 IGKV2-30P06310 120 aa8.75□□□□□ -1.01
TRAF3-201ENST00000347662 PROK1P58294 105 aa8.75□□□□□ -1.01
TRAF3-201ENST00000347662 C10orf99Q6UWK7 81 aa8.75□□□□□ -1.01
TRAF3-201ENST00000347662 ZNF73O43830 326 aaPredicted RBP8.74□□□□□ -1.01
TRAF3-201ENST00000347662 NDUFA7O95182 113 aa8.74□□□□□ -1.01
TRAF3-201ENST00000347662 DEFB116Q30KQ4 102 aa8.74□□□□□ -1.01
TRAF3-201ENST00000347662 DEFB114Q30KQ6 69 aa8.74□□□□□ -1.01
TRAF3-201ENST00000347662 REG3GQ6UW15 175 aa8.74□□□□□ -1.01
TRAF3-201ENST00000347662 CRIP2P52943 208 aaPredicted RBP8.74□□□□□ -1.01
TRAF3-201ENST00000347662 Q6ZSV7 163 aa8.73□□□□□ -1.01
TRAF3-201ENST00000347662 SMIM11BQ8TCY0 68 aa8.73□□□□□ -1.01
TRAF3-201ENST00000347662 KRTAP10-9P60411 292 aa8.72□□□□□ -1.01
TRAF3-201ENST00000347662 C5orf42Q9H799 3197 aa8.72□□□□□ -1.01
TRAF3-201ENST00000347662 PYGO1Q9Y3Y4 419 aa8.72□□□□□ -1.01
TRAF3-201ENST00000347662 H0Y9P7 68 aa8.72□□□□□ -1.01
TRAF3-201ENST00000347662 ACYP2P14621 99 aa8.71□□□□□ -1.01
TRAF3-201ENST00000347662 IGLV4-3A0A075B6K6 122 aa8.71□□□□□ -1.01
TRAF3-201ENST00000347662 SPAG11AQ6PDA7 123 aa8.71□□□□□ -1.01
TRAF3-201ENST00000347662 CD164L2Q6UWJ8 174 aa8.71□□□□□ -1.01
TRAF3-201ENST00000347662 A8MZ25 164 aa8.71□□□□□ -1.01
TRAF3-201ENST00000347662 RNASE3P12724 160 aaKnown RBP8.71□□□□□ -1.02
TRAF3-201ENST00000347662 C2orf48Q96LS8 159 aa8.71□□□□□ -1.02
TRAF3-201ENST00000347662 MRPS12O15235 138 aaKnown RBP8.7□□□□□ -1.02
TRAF3-201ENST00000347662 LELP1Q5T871 98 aa8.7□□□□□ -1.02
TRAF3-201ENST00000347662 C10orf91Q5T1B1 145 aa8.7□□□□□ -1.02
TRAF3-201ENST00000347662 RNF185Q96GF1 192 aa8.7□□□□□ -1.02
TRAF3-201ENST00000347662 TRBV30A0A0K0K1B3 111 aa8.69□□□□□ -1.02
TRAF3-201ENST00000347662 RBX1P62877 108 aa8.69□□□□□ -1.02
TRAF3-201ENST00000347662 C11orf71Q6IPW1 123 aa8.69□□□□□ -1.02
TRAF3-201ENST00000347662 BPTFQ12830 3046 aa8.69□□□□□ -1.02
TRAF3-201ENST00000347662 FAM167A-AS1Q96KT0 104 aa8.69□□□□□ -1.02
TRAF3-201ENST00000347662 hDV103S1A0JD37 113 aa8.69□□□□□ -1.02
TRAF3-201ENST00000347662 LINC00694P0DN24 101 aa8.69□□□□□ -1.02
TRAF3-201ENST00000347662 COL5A1P20908 1838 aaPredicted RBP8.69□□□□□ -1.02
TRAF3-201ENST00000347662 C6orf223Q8N319 242 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms