RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 Q1RN00 199 aa9.45□□□□□ -0.9
CPNE1-201ENST00000317677 TIMM17AQ99595 171 aa9.45□□□□□ -0.9
CPNE1-201ENST00000317677 DPH3P1Q9H4G8 78 aa9.45□□□□□ -0.9
CPNE1-201ENST00000317677 LST1O00453 97 aa9.44□□□□□ -0.9
CPNE1-201ENST00000317677 ZNF876PQ49A33 203 aa9.44□□□□□ -0.9
CPNE1-201ENST00000317677 ZNF22P17026 224 aaPredicted RBP9.44□□□□□ -0.9
CPNE1-201ENST00000317677 LINC00482Q8N8I6 264 aa9.44□□□□□ -0.9
CPNE1-201ENST00000317677 C19orf73Q9NVV2 129 aa9.44□□□□□ -0.9
CPNE1-201ENST00000317677 ICOSQ9Y6W8 199 aa9.44□□□□□ -0.9
CPNE1-201ENST00000317677 H7C2G1 150 aa9.43□□□□□ -0.9
CPNE1-201ENST00000317677 HIST1H4AP62805 103 aaKnown RBP9.43□□□□□ -0.9
CPNE1-201ENST00000317677 WFDC10AQ9H1F0 79 aa9.43□□□□□ -0.9
CPNE1-201ENST00000317677 TMEM258P61165 79 aa9.43□□□□□ -0.9
CPNE1-201ENST00000317677 BEAN1Q3B7T3 259 aa9.43□□□□□ -0.9
CPNE1-201ENST00000317677 RPL39LQ96EH5 51 aaKnown RBP9.43□□□□□ -0.9
CPNE1-201ENST00000317677 EDA2RQ9HAV5 297 aa9.43□□□□□ -0.9
CPNE1-201ENST00000317677 VWFP04275 2813 aa9.42□□□□□ -0.9
CPNE1-201ENST00000317677 MGPP08493 103 aa9.42□□□□□ -0.9
CPNE1-201ENST00000317677 DPH3Q96FX2 82 aa9.42□□□□□ -0.9
CPNE1-201ENST00000317677 KLK5Q9Y337 293 aaPredicted RBP9.42□□□□□ -0.9
CPNE1-201ENST00000317677 A0A087WWL8 130 aa9.41□□□□□ -0.9
CPNE1-201ENST00000317677 F5H768 121 aa9.41□□□□□ -0.9
CPNE1-201ENST00000317677 ATOX1O00244 68 aa9.41□□□□□ -0.9
CPNE1-201ENST00000317677 TRACP01848 142 aa9.41□□□□□ -0.9
CPNE1-201ENST00000317677 HTN1P15515 57 aa9.4□□□□□ -0.9
CPNE1-201ENST00000317677 STHQ8IWL8 128 aa9.4□□□□□ -0.9
CPNE1-201ENST00000317677 C1orf158Q8N1D5 194 aa9.4□□□□□ -0.9
CPNE1-201ENST00000317677 XCL2Q9UBD3 114 aa9.4□□□□□ -0.9
CPNE1-201ENST00000317677 NACAE9PAV3 2078 aa9.4□□□□□ -0.91
CPNE1-201ENST00000317677 GIG44P09565 113 aaPredicted RBP9.39□□□□□ -0.91
CPNE1-201ENST00000317677 SUMO4Q6EEV6 95 aa9.39□□□□□ -0.91
CPNE1-201ENST00000317677 PF4P02776 101 aa9.39□□□□□ -0.91
CPNE1-201ENST00000317677 C11orf72Q8NBR9 251 aa9.39□□□□□ -0.91
CPNE1-201ENST00000317677 LINC00467Q9BRT7 94 aa9.39□□□□□ -0.91
CPNE1-201ENST00000317677 TP53TG1Q9Y2A0 90 aa9.39□□□□□ -0.91
CPNE1-201ENST00000317677 INSP01308 110 aa9.38□□□□□ -0.91
CPNE1-201ENST00000317677 KIR2DL5BQ8NHK3 375 aa9.38□□□□□ -0.91
CPNE1-201ENST00000317677 SMCR5Q8TEV8 140 aa9.38□□□□□ -0.91
CPNE1-201ENST00000317677 MGAM2Q2M2H8 2515 aa9.38□□□□□ -0.91
CPNE1-201ENST00000317677 POLR2KP53803 58 aaKnown RBP9.37□□□□□ -0.91
CPNE1-201ENST00000317677 A0A0J9YXY3 114 aa9.37□□□□□ -0.91
CPNE1-201ENST00000317677 FAM74A4Q5TZK3 123 aa9.37□□□□□ -0.91
CPNE1-201ENST00000317677 LITAFQ99732 161 aa9.37□□□□□ -0.91
CPNE1-201ENST00000317677 VCYO14598 125 aa9.36□□□□□ -0.91
CPNE1-201ENST00000317677 DAND5Q8N907 189 aa9.36□□□□□ -0.91
CPNE1-201ENST00000317677 I3L3M4 83 aa9.35□□□□□ -0.91
CPNE1-201ENST00000317677 ZNF415Q09FC8 603 aa9.35□□□□□ -0.91
CPNE1-201ENST00000317677 Q5XG85 94 aa9.35□□□□□ -0.91
CPNE1-201ENST00000317677 hADV29S1A0JD25 119 aa9.34□□□□□ -0.91
CPNE1-201ENST00000317677 M0QY20 66 aa9.34□□□□□ -0.91
CPNE1-201ENST00000317677 RPL35AP18077 110 aaKnown RBP9.34□□□□□ -0.91
CPNE1-201ENST00000317677 CMC4P56277 68 aaPredicted RBP9.34□□□□□ -0.91
CPNE1-201ENST00000317677 IL17DQ8TAD2 202 aa9.34□□□□□ -0.91
CPNE1-201ENST00000317677 TIMM21Q9BVV7 248 aa9.34□□□□□ -0.91
CPNE1-201ENST00000317677 F5H697 171 aa9.33□□□□□ -0.92
CPNE1-201ENST00000317677 CLEC2BQ92478 149 aa9.33□□□□□ -0.92
CPNE1-201ENST00000317677 UPK3BQ9BT76 320 aa9.33□□□□□ -0.92
CPNE1-201ENST00000317677 IGHV3OR16-12A0A075B7B8 117 aa9.33□□□□□ -0.92
CPNE1-201ENST00000317677 DEFB104AQ8WTQ1 72 aa9.33□□□□□ -0.92
CPNE1-201ENST00000317677 RPL18AQ02543 176 aaKnown RBP9.32□□□□□ -0.92
CPNE1-201ENST00000317677 CSNK1G2-AS1Q8NCQ2 148 aa9.32□□□□□ -0.92
CPNE1-201ENST00000317677 TRBV6-5A0A0K0K1A5 114 aa9.32□□□□□ -0.92
CPNE1-201ENST00000317677 TRBV27A0A0K0K1C4 114 aa9.32□□□□□ -0.92
CPNE1-201ENST00000317677 F8WDY8 70 aa9.32□□□□□ -0.92
CPNE1-201ENST00000317677 MIAQ16674 131 aa9.32□□□□□ -0.92
CPNE1-201ENST00000317677 C4orf26Q17RF5 130 aa9.32□□□□□ -0.92
CPNE1-201ENST00000317677 Q6ZSN1 163 aa9.32□□□□□ -0.92
CPNE1-201ENST00000317677 SERP2Q8N6R1 65 aa9.32□□□□□ -0.92
CPNE1-201ENST00000317677 PKD1L1Q8TDX9 2849 aa9.31□□□□□ -0.92
CPNE1-201ENST00000317677 TRAV8-3A0A0A6YYJ7 113 aa9.31□□□□□ -0.92
CPNE1-201ENST00000317677 IGHV3-73A0A0B4J1V6 119 aa9.31□□□□□ -0.92
CPNE1-201ENST00000317677 RPL39P62891 51 aaKnown RBP9.31□□□□□ -0.92
CPNE1-201ENST00000317677 Q9UF83 564 aa9.31□□□□□ -0.92
CPNE1-201ENST00000317677 TIMM17BO60830 172 aa9.3□□□□□ -0.92
CPNE1-201ENST00000317677 RHOHQ15669 191 aa9.3□□□□□ -0.92
CPNE1-201ENST00000317677 PIK3CD-AS1Q5SR53 167 aa9.3□□□□□ -0.92
CPNE1-201ENST00000317677 TRRAPQ9Y4A5 3859 aa9.3□□□□□ -0.92
CPNE1-201ENST00000317677 PLAC8L1A1L4L8 177 aa9.3□□□□□ -0.92
CPNE1-201ENST00000317677 OXTP01178 125 aa9.3□□□□□ -0.92
CPNE1-201ENST00000317677 C9orf66Q5T8R8 295 aa9.3□□□□□ -0.92
CPNE1-201ENST00000317677 FAM222AQ5U5X8 452 aa9.3□□□□□ -0.92
CPNE1-201ENST00000317677 NOTCH3Q9UM47 2321 aa9.29□□□□□ -0.92
CPNE1-201ENST00000317677 NDUFC2-KCTD14E9PQ53 114 aa9.29□□□□□ -0.92
CPNE1-201ENST00000317677 PRSS2P07478 247 aa9.29□□□□□ -0.92
CPNE1-201ENST00000317677 RS1O15537 224 aa9.28□□□□□ -0.92
CPNE1-201ENST00000317677 INAFM2P0DMQ5 153 aa9.28□□□□□ -0.92
CPNE1-201ENST00000317677 IGHV3-30-3P0DP02 117 aa9.28□□□□□ -0.92
CPNE1-201ENST00000317677 CYSTM1Q9H1C7 97 aa9.28□□□□□ -0.92
CPNE1-201ENST00000317677 TRAV13-1A0A0B4J241 112 aa9.28□□□□□ -0.92
CPNE1-201ENST00000317677 ADAMTSL4-AS1Q5T5F5 129 aa9.28□□□□□ -0.92
CPNE1-201ENST00000317677 HRCT1Q6UXD1 115 aa9.28□□□□□ -0.92
CPNE1-201ENST00000317677 PRO0628Q9UI54 55 aa9.28□□□□□ -0.92
CPNE1-201ENST00000317677 COX7A2LO14548 114 aa9.27□□□□□ -0.93
CPNE1-201ENST00000317677 PYGO1Q9Y3Y4 419 aa9.27□□□□□ -0.93
CPNE1-201ENST00000317677 MALP21145 153 aa9.26□□□□□ -0.93
CPNE1-201ENST00000317677 DAZ2Q13117 558 aaKnown RBP9.26□□□□□ -0.93
CPNE1-201ENST00000317677 Q6ZTI0 123 aa9.26□□□□□ -0.93
CPNE1-201ENST00000317677 DAZ4Q86SG3 579 aaKnown RBP9.26□□□□□ -0.93
CPNE1-201ENST00000317677 WFDC9Q8NEX5 89 aa9.26□□□□□ -0.93
CPNE1-201ENST00000317677 DAZ3Q9NR90 486 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms