RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 REG3GQ6UW15 175 aa9.65□□□□□ -0.86
COL1A1-201ENST00000225964 ESRGQ1W209 222 aa9.65□□□□□ -0.86
COL1A1-201ENST00000225964 TIMM17BO60830 172 aa9.65□□□□□ -0.87
COL1A1-201ENST00000225964 NRACQ8N912 160 aa9.65□□□□□ -0.87
COL1A1-201ENST00000225964 SHANK1Q9Y566 2161 aa9.65□□□□□ -0.87
COL1A1-201ENST00000225964 CDSNQ15517 529 aa9.64□□□□□ -0.87
COL1A1-201ENST00000225964 X6R8D5 127 aa9.64□□□□□ -0.87
COL1A1-201ENST00000225964 MRPS12O15235 138 aaKnown RBP9.64□□□□□ -0.87
COL1A1-201ENST00000225964 MRPS36P82909 103 aaKnown RBP9.64□□□□□ -0.87
COL1A1-201ENST00000225964 PCDH15Q96QU1 1955 aa9.64□□□□□ -0.87
COL1A1-201ENST00000225964 V9GYY9 64 aa9.63□□□□□ -0.87
COL1A1-201ENST00000225964 FREM1Q5H8C1 2179 aa9.63□□□□□ -0.87
COL1A1-201ENST00000225964 KLLNB2CW77 178 aa9.63□□□□□ -0.87
COL1A1-201ENST00000225964 FSHBP01225 129 aa9.63□□□□□ -0.87
COL1A1-201ENST00000225964 KRTAP10-9P60411 292 aa9.63□□□□□ -0.87
COL1A1-201ENST00000225964 FAM19A3Q7Z5A8 133 aa9.63□□□□□ -0.87
COL1A1-201ENST00000225964 C6orf223Q8N319 242 aa9.63□□□□□ -0.87
COL1A1-201ENST00000225964 Q8IZM0 81 aa9.63□□□□□ -0.87
COL1A1-201ENST00000225964 A6NED7 52 aa9.63□□□□□ -0.87
COL1A1-201ENST00000225964 LINC01556Q5JQF7 62 aa9.63□□□□□ -0.87
COL1A1-201ENST00000225964 CRIP3Q6Q6R5 217 aa9.62□□□□□ -0.87
COL1A1-201ENST00000225964 OTOGLQ3ZCN5 2332 aa9.62□□□□□ -0.87
COL1A1-201ENST00000225964 C1orf137Q5JT78 98 aa9.62□□□□□ -0.87
COL1A1-201ENST00000225964 AVPP01185 164 aa9.62□□□□□ -0.87
COL1A1-201ENST00000225964 C11orf21Q9P2W6 132 aa9.62□□□□□ -0.87
COL1A1-201ENST00000225964 PRO3102Q9H379 93 aa9.61□□□□□ -0.87
COL1A1-201ENST00000225964 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.61□□□□□ -0.87
COL1A1-201ENST00000225964 CDC42SE2Q9NRR3 84 aa9.61□□□□□ -0.87
COL1A1-201ENST00000225964 C9orf116Q5BN46 136 aaPredicted RBP9.6□□□□□ -0.87
COL1A1-201ENST00000225964 IGHV6-1A0A0B4J1U7 121 aa9.6□□□□□ -0.87
COL1A1-201ENST00000225964 C1orf134Q5TEV5 83 aa9.6□□□□□ -0.87
COL1A1-201ENST00000225964 FAM208BQ5VWN6 2430 aa9.6□□□□□ -0.87
COL1A1-201ENST00000225964 Q6ZTC4 211 aa9.6□□□□□ -0.87
COL1A1-201ENST00000225964 UNQ6190/PRO20217Q6UXQ8 127 aa9.59□□□□□ -0.87
COL1A1-201ENST00000225964 ATP5EP56381 51 aaPredicted RBP9.59□□□□□ -0.87
COL1A1-201ENST00000225964 PCNX3Q9H6A9 2034 aa9.59□□□□□ -0.87
COL1A1-201ENST00000225964 POM121L12Q8N7R1 296 aa9.59□□□□□ -0.87
COL1A1-201ENST00000225964 LST1O00453 97 aa9.58□□□□□ -0.88
COL1A1-201ENST00000225964 PRYO14603 147 aa9.57□□□□□ -0.88
COL1A1-201ENST00000225964 NDUFC1O43677 76 aa9.57□□□□□ -0.88
COL1A1-201ENST00000225964 CRIP2P52943 208 aaPredicted RBP9.57□□□□□ -0.88
COL1A1-201ENST00000225964 SERP2Q8N6R1 65 aa9.57□□□□□ -0.88
COL1A1-201ENST00000225964 CELA1Q9UNI1 258 aa9.57□□□□□ -0.88
COL1A1-201ENST00000225964 COL5A1P20908 1838 aaPredicted RBP9.57□□□□□ -0.88
COL1A1-201ENST00000225964 GAS8-AS1O95177 125 aa9.56□□□□□ -0.88
COL1A1-201ENST00000225964 ODF3L2Q3SX64 289 aa9.55□□□□□ -0.88
COL1A1-201ENST00000225964 HCFC1P51610 2035 aa9.55□□□□□ -0.88
COL1A1-201ENST00000225964 COX6A2Q02221 97 aa9.55□□□□□ -0.88
COL1A1-201ENST00000225964 POLR2KP53803 58 aaKnown RBP9.54□□□□□ -0.88
COL1A1-201ENST00000225964 EGFEM1PQ0D2K5 195 aa9.54□□□□□ -0.88
COL1A1-201ENST00000225964 HIVEP2P31629 2446 aa9.54□□□□□ -0.88
COL1A1-201ENST00000225964 TRBV10-3A0A0K0K1G6 114 aa9.54□□□□□ -0.88
COL1A1-201ENST00000225964 EXPH5Q8NEV8 1989 aa9.54□□□□□ -0.88
COL1A1-201ENST00000225964 MED13LQ71F56 2210 aa9.54□□□□□ -0.88
COL1A1-201ENST00000225964 Q9BRP9 147 aa9.53□□□□□ -0.88
COL1A1-201ENST00000225964 IGLV1-51P01701 117 aa9.53□□□□□ -0.88
COL1A1-201ENST00000225964 MUC7Q8TAX7 377 aa9.53□□□□□ -0.88
COL1A1-201ENST00000225964 PRR3P79522 188 aaKnown RBP9.53□□□□□ -0.88
COL1A1-201ENST00000225964 C16orf95Q9H693 158 aa9.53□□□□□ -0.88
COL1A1-201ENST00000225964 ATG2AQ2TAZ0 1938 aa9.53□□□□□ -0.88
COL1A1-201ENST00000225964 CACNA1HO95180 2353 aa9.52□□□□□ -0.89
COL1A1-201ENST00000225964 IGLV4-60A0A075B6I1 120 aa9.52□□□□□ -0.89
COL1A1-201ENST00000225964 FHL2Q14192 279 aa9.52□□□□□ -0.89
COL1A1-201ENST00000225964 SPINK1P00995 79 aa9.52□□□□□ -0.89
COL1A1-201ENST00000225964 Q8N814 137 aa9.5□□□□□ -0.89
COL1A1-201ENST00000225964 LINC00242Q5T6M2 205 aa9.5□□□□□ -0.89
COL1A1-201ENST00000225964 BDP1A6H8Y1 2624 aa9.5□□□□□ -0.89
COL1A1-201ENST00000225964 CHCHD7Q9BUK0 85 aa9.49□□□□□ -0.89
COL1A1-201ENST00000225964 TRBV7-6A0A0J9YX20 115 aa9.49□□□□□ -0.89
COL1A1-201ENST00000225964 NTM-AS1Q6ZSK4 140 aa9.49□□□□□ -0.89
COL1A1-201ENST00000225964 LINC00208Q96KT6 92 aa9.49□□□□□ -0.89
COL1A1-201ENST00000225964 LRP4O75096 1905 aa9.48□□□□□ -0.89
COL1A1-201ENST00000225964 LINC00694P0DN24 101 aa9.48□□□□□ -0.89
COL1A1-201ENST00000225964 MUC22E2RYF6 1773 aaPredicted RBP9.48□□□□□ -0.89
COL1A1-201ENST00000225964 A0A087WYN8 130 aa9.48□□□□□ -0.89
COL1A1-201ENST00000225964 PCOTHQ58A44 107 aa9.48□□□□□ -0.89
COL1A1-201ENST00000225964 DEFB116Q30KQ4 102 aa9.47□□□□□ -0.89
COL1A1-201ENST00000225964 C2orf48Q96LS8 159 aa9.47□□□□□ -0.89
COL1A1-201ENST00000225964 NOTCH2Q04721 2471 aa9.47□□□□□ -0.89
COL1A1-201ENST00000225964 EML5Q05BV3 1969 aa9.47□□□□□ -0.89
COL1A1-201ENST00000225964 SMIM1B2RUZ4 78 aa9.47□□□□□ -0.89
COL1A1-201ENST00000225964 C2orf91Q6ZV80 131 aa9.47□□□□□ -0.89
COL1A1-201ENST00000225964 LINC01547P58512 204 aaPredicted RBP9.46□□□□□ -0.89
COL1A1-201ENST00000225964 Q6JHZ5 121 aa9.46□□□□□ -0.89
COL1A1-201ENST00000225964 IGIPA6NJ69 53 aa9.46□□□□□ -0.89
COL1A1-201ENST00000225964 ADAMTS20P59510 1910 aa9.46□□□□□ -0.89
COL1A1-201ENST00000225964 LYPD5Q6UWN5 251 aa9.46□□□□□ -0.89
COL1A1-201ENST00000225964 LINC00337Q8N6G1 96 aa9.46□□□□□ -0.89
COL1A1-201ENST00000225964 SBSPONQ8IVN8 264 aa9.46□□□□□ -0.9
COL1A1-201ENST00000225964 CPAMD8Q8IZJ3 1885 aa9.46□□□□□ -0.9
COL1A1-201ENST00000225964 IMUPQ9GZP8 106 aa9.45□□□□□ -0.9
COL1A1-201ENST00000225964 LIMD2Q9BT23 127 aa9.45□□□□□ -0.9
COL1A1-201ENST00000225964 NHLRC4P0CG21 123 aaPredicted RBP9.44□□□□□ -0.9
COL1A1-201ENST00000225964 Q6Q795 121 aa9.44□□□□□ -0.9
COL1A1-201ENST00000225964 COX7CP15954 63 aa9.44□□□□□ -0.9
COL1A1-201ENST00000225964 PRR14LQ5THK1 2151 aa9.44□□□□□ -0.9
COL1A1-201ENST00000225964 CCDC179H3BU77 68 aa9.42□□□□□ -0.9
COL1A1-201ENST00000225964 PTPN13Q12923 2485 aa9.42□□□□□ -0.9
COL1A1-201ENST00000225964 SRCAPQ6ZRS2 3230 aa9.42□□□□□ -0.9
COL1A1-201ENST00000225964 F8WDY8 70 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms