RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 TRBV6-8A0A0A6YYG3 113 aa15.01□□□□□ -0.01
SPAST-204ENST00000621856 DEFB121Q5J5C9 76 aa15.01□□□□□ -0.01
SPAST-204ENST00000621856 KPRPQ5T749 579 aaPredicted RBP15.01□□□□□ -0.01
SPAST-204ENST00000621856 AMMECR1LQ6DCA0 310 aa15.01□□□□□ -0.01
SPAST-204ENST00000621856 MRPL52Q86TS9 123 aaKnown RBP15.01□□□□□ -0.01
SPAST-204ENST00000621856 PCP2Q8IVA1 136 aa15.01□□□□□ -0.01
SPAST-204ENST00000621856 VSIG2Q96IQ7 327 aa15.01□□□□□ -0.01
SPAST-204ENST00000621856 C11orf68Q9H3H3 251 aaKnown RBP15.01□□□□□ -0.01
SPAST-204ENST00000621856 TMEM170BQ5T4T1 132 aa15□□□□□ -0.01
SPAST-204ENST00000621856 NFE4Q86UQ8 179 aa15□□□□□ -0.01
SPAST-204ENST00000621856 MRPS16Q9Y3D3 137 aaKnown RBP15□□□□□ -0.01
SPAST-204ENST00000621856 TRAV26-1A0A087WT03 109 aa15□□□□□ -0.01
SPAST-204ENST00000621856 A0A0J9YXV3 536 aa15□□□□□ -0.01
SPAST-204ENST00000621856 C12orf74Q32Q52 190 aa15□□□□□ -0.01
SPAST-204ENST00000621856 BOD1L2Q8IYS8 172 aa15□□□□□ -0.01
SPAST-204ENST00000621856 HERVK_113P61574 105 aa14.99□□□□□ -0.01
SPAST-204ENST00000621856 OR5A1Q8NGJ0 315 aa14.99□□□□□ -0.01
SPAST-204ENST00000621856 TMEM101Q96IK0 257 aa14.99□□□□□ -0.01
SPAST-204ENST00000621856 A0A096LPF7 62 aa14.98□□□□□ -0.01
SPAST-204ENST00000621856 H7C423 109 aa14.98□□□□□ -0.01
SPAST-204ENST00000621856 M0R143 59 aa14.98□□□□□ -0.01
SPAST-204ENST00000621856 CSDC2Q9Y534 153 aaKnown RBP14.98□□□□□ -0.01
SPAST-204ENST00000621856 DLEU1O43261 78 aa14.97□□□□□ -0.01
SPAST-204ENST00000621856 GAGE6Q13070 117 aa14.97□□□□□ -0.01
SPAST-204ENST00000621856 CHCHD5Q9BSY4 110 aa14.97□□□□□ -0.01
SPAST-204ENST00000621856 NOTCH1P46531 2555 aa14.97□□□□□ -0.01
SPAST-204ENST00000621856 A0A0J9YWU9 116 aa14.97□□□□□ -0.01
SPAST-204ENST00000621856 E9PLD3 99 aa14.97□□□□□ -0.01
SPAST-204ENST00000621856 EREGO14944 169 aa14.97□□□□□ -0.01
SPAST-204ENST00000621856 SPATA25Q9BR10 227 aa14.97□□□□□ -0.01
SPAST-204ENST00000621856 SNHG12Q9BXW3 62 aa14.97□□□□□ -0.01
SPAST-204ENST00000621856 TRAV8-6A0A0B4J262 113 aa14.96□□□□□ -0.01
SPAST-204ENST00000621856 MRAPQ8TCY5 172 aa14.96□□□□□ -0.01
SPAST-204ENST00000621856 TTTY13Q9BZ97 58 aa14.96□□□□□ -0.01
SPAST-204ENST00000621856 ZNF22P17026 224 aaPredicted RBP14.95□□□□□ -0.02
SPAST-204ENST00000621856 BATFQ16520 125 aa14.95□□□□□ -0.02
SPAST-204ENST00000621856 C2orf91Q6ZV80 131 aa14.95□□□□□ -0.02
SPAST-204ENST00000621856 ZNF25P17030 456 aaPredicted RBP14.94□□□□□ -0.02
SPAST-204ENST00000621856 CDC42SE2Q9NRR3 84 aa14.94□□□□□ -0.02
SPAST-204ENST00000621856 UBE2D1P51668 147 aa14.93□□□□□ -0.02
SPAST-204ENST00000621856 MRPL23Q16540 153 aaKnown RBP14.93□□□□□ -0.02
SPAST-204ENST00000621856 ICOSQ9Y6W8 199 aa14.93□□□□□ -0.02
SPAST-204ENST00000621856 TINCRA0A1B0GVN0 87 aa14.92□□□□□ -0.02
SPAST-204ENST00000621856 SIVA1O15304 175 aa14.92□□□□□ -0.02
SPAST-204ENST00000621856 TM2D3Q9BRN9 247 aa14.92□□□□□ -0.02
SPAST-204ENST00000621856 GEMIN7Q9H840 131 aaKnown RBP14.92□□□□□ -0.02
SPAST-204ENST00000621856 TMEM223A0PJW6 202 aa14.91□□□□□ -0.02
SPAST-204ENST00000621856 HINT1P49773 126 aaPredicted RBP14.91□□□□□ -0.02
SPAST-204ENST00000621856 Q6ZTC4 211 aa14.91□□□□□ -0.02
SPAST-204ENST00000621856 MAPKAPK5-AS1Q8N8E1 139 aa14.91□□□□□ -0.02
SPAST-204ENST00000621856 SH2D6Q7Z4S9 175 aa14.89□□□□□ -0.03
SPAST-204ENST00000621856 C11orf45Q8TAV5 145 aa14.89□□□□□ -0.03
SPAST-204ENST00000621856 TRAV13-1A0A0B4J241 112 aa14.89□□□□□ -0.03
SPAST-204ENST00000621856 TMEM262E9PQX1 116 aa14.89□□□□□ -0.03
SPAST-204ENST00000621856 LINC00469Q8N7U9 141 aa14.89□□□□□ -0.03
SPAST-204ENST00000621856 MYMXA0A1B0GTQ4 84 aa14.88□□□□□ -0.03
SPAST-204ENST00000621856 NANOS2P60321 138 aaKnown RBP14.88□□□□□ -0.03
SPAST-204ENST00000621856 LURAP1LQ8IV03 231 aa14.88□□□□□ -0.03
SPAST-204ENST00000621856 NBEAL1Q6ZS30 2694 aa14.87□□□□□ -0.03
SPAST-204ENST00000621856 IGLV4-60A0A075B6I1 120 aa14.87□□□□□ -0.03
SPAST-204ENST00000621856 TIRAPP58753 221 aa14.87□□□□□ -0.03
SPAST-204ENST00000621856 LBHQ53QV2 105 aaPredicted RBP14.87□□□□□ -0.03
SPAST-204ENST00000621856 MPV17L2Q567V2 206 aa14.87□□□□□ -0.03
SPAST-204ENST00000621856 MGAM2Q2M2H8 2515 aa14.87□□□□□ -0.03
SPAST-204ENST00000621856 IGHV3-64A0A075B6Q5 118 aa14.86□□□□□ -0.03
SPAST-204ENST00000621856 LEPROTO15243 131 aa14.86□□□□□ -0.03
SPAST-204ENST00000621856 SEC11AP67812 179 aa14.86□□□□□ -0.03
SPAST-204ENST00000621856 ZNF815PA8K554 130 aa14.86□□□□□ -0.03
SPAST-204ENST00000621856 LGALS3P17931 250 aaKnown RBP14.85□□□□□ -0.03
SPAST-204ENST00000621856 HERVK_113P63121 156 aa14.85□□□□□ -0.03
SPAST-204ENST00000621856 LINC00242Q5T6M2 205 aa14.85□□□□□ -0.03
SPAST-204ENST00000621856 HIGD1BQ9P298 99 aa14.85□□□□□ -0.03
SPAST-204ENST00000621856 J3QQQ9 107 aa14.84□□□□□ -0.03
SPAST-204ENST00000621856 IGKV3OR2-268A0A0C4DH90 116 aa14.83□□□□□ -0.03
SPAST-204ENST00000621856 H3BRM9 83 aa14.83□□□□□ -0.03
SPAST-204ENST00000621856 TSPEAR-AS2P59090 65 aa14.83□□□□□ -0.03
SPAST-204ENST00000621856 COX6A2Q02221 97 aa14.83□□□□□ -0.03
SPAST-204ENST00000621856 FAM19A3Q7Z5A8 133 aa14.83□□□□□ -0.03
SPAST-204ENST00000621856 PLEKHB2Q96CS7 222 aa14.83□□□□□ -0.03
SPAST-204ENST00000621856 H3BNG1 76 aa14.83□□□□□ -0.04
SPAST-204ENST00000621856 RBX1P62877 108 aa14.83□□□□□ -0.04
SPAST-204ENST00000621856 CDKN2A-AS1Q9UH64 79 aa14.83□□□□□ -0.04
SPAST-204ENST00000621856 DEFB131BA0A096LNP1 70 aa14.82□□□□□ -0.04
SPAST-204ENST00000621856 SPINK8P0C7L1 97 aa14.82□□□□□ -0.04
SPAST-204ENST00000621856 HSD52Q0P140 79 aa14.82□□□□□ -0.04
SPAST-204ENST00000621856 BVES-AS1Q5T3Y7 98 aa14.82□□□□□ -0.04
SPAST-204ENST00000621856 TENM3Q9P273 2699 aa14.82□□□□□ -0.04
SPAST-204ENST00000621856 IGLV5-45A0A087WSX0 123 aa14.81□□□□□ -0.04
SPAST-204ENST00000621856 A0A1B0GUV1 79 aa14.81□□□□□ -0.04
SPAST-204ENST00000621856 LELP1Q5T871 98 aa14.81□□□□□ -0.04
SPAST-204ENST00000621856 TRAV8-3A0A0A6YYJ7 113 aa14.8□□□□□ -0.04
SPAST-204ENST00000621856 IGHV3-30-3P0DP02 117 aa14.8□□□□□ -0.04
SPAST-204ENST00000621856 COL5A1-AS1Q5SY13 56 aa14.8□□□□□ -0.04
SPAST-204ENST00000621856 SCGB1D4Q6XE38 83 aa14.8□□□□□ -0.04
SPAST-204ENST00000621856 IGHV1-58A0A0C4DH39 117 aa14.79□□□□□ -0.04
SPAST-204ENST00000621856 LYPD5Q6UWN5 251 aa14.78□□□□□ -0.04
SPAST-204ENST00000621856 TRAV10A0A0B4J240 114 aa14.75□□□□□ -0.05
SPAST-204ENST00000621856 ORAOV1Q8WV07 137 aa14.75□□□□□ -0.05
SPAST-204ENST00000621856 LINC00959A0A1B0GUT2 108 aa14.74□□□□□ -0.05
SPAST-204ENST00000621856 GCSHP23434 173 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms