RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 LRRC37A5PQ49AS3 106 aa3.85□□□□□ -1.79
MUC1-227ENST00000615517 TMEM167BQ9NRX6 74 aa3.85□□□□□ -1.79
MUC1-227ENST00000615517 H7C423 109 aa3.84□□□□□ -1.79
MUC1-227ENST00000615517 CXorf1O96002 111 aa3.84□□□□□ -1.79
MUC1-227ENST00000615517 TLX1NBP0CAT3 122 aa3.84□□□□□ -1.79
MUC1-227ENST00000615517 UBE2G2P60604 165 aa3.84□□□□□ -1.79
MUC1-227ENST00000615517 CNPY1Q3B7I2 92 aa3.84□□□□□ -1.79
MUC1-227ENST00000615517 GAGE2EQ4V326 116 aa3.84□□□□□ -1.79
MUC1-227ENST00000615517 C10orf25Q5T742 122 aa3.84□□□□□ -1.79
MUC1-227ENST00000615517 FP248Q71RG6 208 aaPredicted RBP3.84□□□□□ -1.79
MUC1-227ENST00000615517 HIST1H2BAQ96A08 127 aa3.84□□□□□ -1.79
MUC1-227ENST00000615517 FMC1Q96HJ9 113 aa3.84□□□□□ -1.79
MUC1-227ENST00000615517 CTDSP1Q9GZU7 261 aa3.84□□□□□ -1.79
MUC1-227ENST00000615517 GAGE2DQ9UEU5 116 aa3.84□□□□□ -1.79
MUC1-227ENST00000615517 FAM74A7A6NL05 159 aa3.83□□□□□ -1.8
MUC1-227ENST00000615517 G3V3Q6 166 aa3.83□□□□□ -1.8
MUC1-227ENST00000615517 KRTAP4-16G5E9R7 235 aaPredicted RBP3.83□□□□□ -1.8
MUC1-227ENST00000615517 COX7A2LO14548 114 aa3.83□□□□□ -1.8
MUC1-227ENST00000615517 PLA2G10O15496 165 aa3.83□□□□□ -1.8
MUC1-227ENST00000615517 ZNF25P17030 456 aaPredicted RBP3.83□□□□□ -1.8
MUC1-227ENST00000615517 CTAG1AP78358 180 aa3.83□□□□□ -1.8
MUC1-227ENST00000615517 SPAG11BQ08648 103 aa3.83□□□□□ -1.8
MUC1-227ENST00000615517 KRTAP19-4Q3LI73 84 aa3.83□□□□□ -1.8
MUC1-227ENST00000615517 C9orf129Q5T035 196 aaKnown RBP3.83□□□□□ -1.8
MUC1-227ENST00000615517 TRIQKQ629K1 86 aa3.83□□□□□ -1.8
MUC1-227ENST00000615517 CDC42SE2Q9NRR3 84 aa3.83□□□□□ -1.8
MUC1-227ENST00000615517 MRPL35Q9NZE8 188 aaKnown RBP3.83□□□□□ -1.8
MUC1-227ENST00000615517 C6orf48Q9UBA6 75 aa3.83□□□□□ -1.8
MUC1-227ENST00000615517 CENPXA8MT69 81 aa3.82□□□□□ -1.8
MUC1-227ENST00000615517 M0R2T5 61 aa3.82□□□□□ -1.8
MUC1-227ENST00000615517 NUPR1O60356 82 aa3.82□□□□□ -1.8
MUC1-227ENST00000615517 NCR2O95944 276 aa3.82□□□□□ -1.8
MUC1-227ENST00000615517 APCSP02743 223 aa3.82□□□□□ -1.8
MUC1-227ENST00000615517 UBE2G1P62253 170 aa3.82□□□□□ -1.8
MUC1-227ENST00000615517 C5orf38Q86SI9 138 aa3.82□□□□□ -1.8
MUC1-227ENST00000615517 OR2D3Q8NGH3 330 aa3.82□□□□□ -1.8
MUC1-227ENST00000615517 IMMP2LQ96T52 175 aa3.82□□□□□ -1.8
MUC1-227ENST00000615517 SMDT1Q9H4I9 107 aa3.82□□□□□ -1.8
MUC1-227ENST00000615517 B5MCH6 92 aa3.81□□□□□ -1.8
MUC1-227ENST00000615517 IGLC6P0CF74 106 aa3.81□□□□□ -1.8
MUC1-227ENST00000615517 ATP6V0CP27449 155 aa3.81□□□□□ -1.8
MUC1-227ENST00000615517 RPL28P46779 137 aaKnown RBP3.81□□□□□ -1.8
MUC1-227ENST00000615517 ZNF726P1Q15940 193 aa3.81□□□□□ -1.8
MUC1-227ENST00000615517 FAM229BQ4G0N7 80 aa3.81□□□□□ -1.8
MUC1-227ENST00000615517 UNQ6190/PRO20217Q6UXQ8 127 aa3.81□□□□□ -1.8
MUC1-227ENST00000615517 GATD1Q8NB37 220 aa3.81□□□□□ -1.8
MUC1-227ENST00000615517 RPL39LQ96EH5 51 aaKnown RBP3.81□□□□□ -1.8
MUC1-227ENST00000615517 TMEM101Q96IK0 257 aa3.81□□□□□ -1.8
MUC1-227ENST00000615517 KRTAP4-7Q9BYR0 210 aa3.81□□□□□ -1.8
MUC1-227ENST00000615517 NUDT15Q9NV35 164 aa3.81□□□□□ -1.8
MUC1-227ENST00000615517 S100A5P33763 92 aa3.8□□□□□ -1.8
MUC1-227ENST00000615517 BTF3L4Q96K17 158 aa3.8□□□□□ -1.8
MUC1-227ENST00000615517 TPPP3Q9BW30 176 aa3.8□□□□□ -1.8
MUC1-227ENST00000615517 C1orf196B1AJZ1 125 aa3.79□□□□□ -1.8
MUC1-227ENST00000615517 INMT-MINDY4F8WBC2 141 aa3.79□□□□□ -1.8
MUC1-227ENST00000615517 NDUFA1O15239 70 aa3.79□□□□□ -1.8
MUC1-227ENST00000615517 LYRM1O43325 122 aa3.79□□□□□ -1.8
MUC1-227ENST00000615517 BCE1O60756 84 aa3.79□□□□□ -1.8
MUC1-227ENST00000615517 IL7P13232 177 aa3.79□□□□□ -1.8
MUC1-227ENST00000615517 CTRLP40313 264 aa3.79□□□□□ -1.8
MUC1-227ENST00000615517 DEFA1P59665 94 aa3.79□□□□□ -1.8
MUC1-227ENST00000615517 MRPL52Q86TS9 123 aaKnown RBP3.79□□□□□ -1.8
MUC1-227ENST00000615517 KRTAP13-1Q8IUC0 172 aa3.79□□□□□ -1.8
MUC1-227ENST00000615517 C3orf22Q8N5N4 141 aa3.79□□□□□ -1.8
MUC1-227ENST00000615517 OR10D4PQ8NGN7 298 aa3.79□□□□□ -1.8
MUC1-227ENST00000615517 PPP1R1CQ8WVI7 109 aa3.79□□□□□ -1.8
MUC1-227ENST00000615517 NKX6-2Q9C056 277 aaPredicted RBP3.79□□□□□ -1.8
MUC1-227ENST00000615517 ACTR3CQ9C0K3 210 aaPredicted RBP3.79□□□□□ -1.8
MUC1-227ENST00000615517 C22orf24Q9Y442 160 aa3.79□□□□□ -1.8
MUC1-227ENST00000615517 NEBP20929 6669 aa3.79□□□□□ -1.8
MUC1-227ENST00000615517 IGKV2D-26A0A0A0MRZ7 120 aa3.78□□□□□ -1.8
MUC1-227ENST00000615517 CCDC160A6NGH7 325 aa3.78□□□□□ -1.8
MUC1-227ENST00000615517 MPC2O95563 127 aa3.78□□□□□ -1.8
MUC1-227ENST00000615517 AKR1C3P42330 323 aa3.78□□□□□ -1.8
MUC1-227ENST00000615517 H2BFSP57053 126 aa3.78□□□□□ -1.8
MUC1-227ENST00000615517 TMEM241Q24JQ0 296 aa3.78□□□□□ -1.8
MUC1-227ENST00000615517 RNASE13Q5GAN3 156 aaKnown RBP3.78□□□□□ -1.8
MUC1-227ENST00000615517 NUDT10Q8NFP7 164 aa3.78□□□□□ -1.8
MUC1-227ENST00000615517 ORAOV1Q8WV07 137 aa3.78□□□□□ -1.8
MUC1-227ENST00000615517 NUDT11Q96G61 164 aa3.78□□□□□ -1.8
MUC1-227ENST00000615517 PSMG3Q9BT73 122 aaPredicted RBP3.78□□□□□ -1.8
MUC1-227ENST00000615517 ALG5Q9Y673 324 aa3.78□□□□□ -1.8
MUC1-227ENST00000615517 TRAV13-1A0A0B4J241 112 aa3.77□□□□□ -1.81
MUC1-227ENST00000615517 SDHAF1A6NFY7 115 aa3.77□□□□□ -1.81
MUC1-227ENST00000615517 F8WDY8 70 aa3.77□□□□□ -1.81
MUC1-227ENST00000615517 MBP02144 154 aa3.77□□□□□ -1.81
MUC1-227ENST00000615517 SERF2P84101 59 aa3.77□□□□□ -1.81
MUC1-227ENST00000615517 TNFSF18Q9UNG2 199 aa3.77□□□□□ -1.81
MUC1-227ENST00000615517 IGLV8-61A0A075B6I0 122 aa3.76□□□□□ -1.81
MUC1-227ENST00000615517 CTXND1A0A1B0GTU2 59 aa3.76□□□□□ -1.81
MUC1-227ENST00000615517 GAGE10A6NGK3 116 aa3.76□□□□□ -1.81
MUC1-227ENST00000615517 I3L3M4 83 aa3.76□□□□□ -1.81
MUC1-227ENST00000615517 TRGC1P0CF51 173 aa3.76□□□□□ -1.81
MUC1-227ENST00000615517 KIAA0087Q14695 138 aa3.76□□□□□ -1.81
MUC1-227ENST00000615517 LYZL1Q6UWQ5 148 aa3.76□□□□□ -1.81
MUC1-227ENST00000615517 BAGE2Q86Y30 109 aa3.76□□□□□ -1.81
MUC1-227ENST00000615517 RNASE7Q9H1E1 156 aaKnown RBP3.76□□□□□ -1.81
MUC1-227ENST00000615517 TMEM242Q9NWH2 141 aa3.76□□□□□ -1.81
MUC1-227ENST00000615517 NDUFC2-KCTD14E9PQ53 114 aa3.75□□□□□ -1.81
MUC1-227ENST00000615517 PMCHP20382 165 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms