RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.33□□□□□ -1.24
GGA3-221ENST00000614198 CMYA5Q8N3K9 4069 aa7.33□□□□□ -1.24
GGA3-221ENST00000614198 NOTCH1P46531 2555 aa7.33□□□□□ -1.24
GGA3-221ENST00000614198 CCL24O00175 119 aa7.33□□□□□ -1.24
GGA3-221ENST00000614198 RNASE4P34096 147 aaKnown RBP7.33□□□□□ -1.24
GGA3-221ENST00000614198 RPL39P62891 51 aaKnown RBP7.33□□□□□ -1.24
GGA3-221ENST00000614198 TMEM61Q8N0U2 210 aa7.33□□□□□ -1.24
GGA3-221ENST00000614198 TMEM263Q8WUH6 116 aaKnown RBP7.33□□□□□ -1.24
GGA3-221ENST00000614198 TRBV10-2A0A0K0K1G8 114 aa7.32□□□□□ -1.24
GGA3-221ENST00000614198 APRG1Q8IVJ8 170 aa7.32□□□□□ -1.24
GGA3-221ENST00000614198 DNAJC30Q96LL9 226 aa7.32□□□□□ -1.24
GGA3-221ENST00000614198 TRAV12-2A0A075B6T6 113 aa7.32□□□□□ -1.24
GGA3-221ENST00000614198 RBAKDNA6NC62 111 aa7.32□□□□□ -1.24
GGA3-221ENST00000614198 H3BMM0 161 aa7.32□□□□□ -1.24
GGA3-221ENST00000614198 CRYGDP07320 174 aa7.32□□□□□ -1.24
GGA3-221ENST00000614198 UBE2WQ96B02 151 aa7.32□□□□□ -1.24
GGA3-221ENST00000614198 IGLV4-69A0A075B6H9 119 aa7.31□□□□□ -1.24
GGA3-221ENST00000614198 A0A087WWL8 130 aa7.31□□□□□ -1.24
GGA3-221ENST00000614198 A0A0B4J2C4 111 aa7.31□□□□□ -1.24
GGA3-221ENST00000614198 EIF4EBP3O60516 100 aaPredicted RBP7.31□□□□□ -1.24
GGA3-221ENST00000614198 TRBV7-7A0A0K0K1E9 115 aa7.31□□□□□ -1.24
GGA3-221ENST00000614198 TMEM89A2RUT3 159 aa7.31□□□□□ -1.24
GGA3-221ENST00000614198 WFDC10AQ9H1F0 79 aa7.31□□□□□ -1.24
GGA3-221ENST00000614198 DPH3P1Q9H4G8 78 aa7.31□□□□□ -1.24
GGA3-221ENST00000614198 KNCNA6PVL3 124 aa7.31□□□□□ -1.24
GGA3-221ENST00000614198 TSPEAR-AS2P59090 65 aa7.31□□□□□ -1.24
GGA3-221ENST00000614198 AMELXQ99217 191 aa7.31□□□□□ -1.24
GGA3-221ENST00000614198 FAM240AA0A1B0GVK7 77 aa7.3□□□□□ -1.24
GGA3-221ENST00000614198 GNRH2O43555 120 aa7.3□□□□□ -1.24
GGA3-221ENST00000614198 FAM236AA0A1B0GUQ0 79 aa7.3□□□□□ -1.24
GGA3-221ENST00000614198 FAM236BA0A1B0GV22 79 aa7.3□□□□□ -1.24
GGA3-221ENST00000614198 K7EMT4 169 aa7.3□□□□□ -1.24
GGA3-221ENST00000614198 M0R2P5 195 aa7.3□□□□□ -1.24
GGA3-221ENST00000614198 C2orf82Q6UX34 121 aa7.3□□□□□ -1.24
GGA3-221ENST00000614198 C16orf95Q9H693 158 aa7.3□□□□□ -1.24
GGA3-221ENST00000614198 J3QQQ9 107 aa7.29□□□□□ -1.24
GGA3-221ENST00000614198 HERVK_113P63121 156 aa7.29□□□□□ -1.24
GGA3-221ENST00000614198 OPRPNQ99935 248 aaPredicted RBP7.29□□□□□ -1.24
GGA3-221ENST00000614198 NBEAL1Q6ZS30 2694 aa7.29□□□□□ -1.24
GGA3-221ENST00000614198 TRBV30A0A0K0K1B3 111 aa7.29□□□□□ -1.24
GGA3-221ENST00000614198 F5H768 121 aa7.29□□□□□ -1.24
GGA3-221ENST00000614198 TSHBP01222 138 aa7.28□□□□□ -1.24
GGA3-221ENST00000614198 PMVKQ15126 192 aa7.28□□□□□ -1.24
GGA3-221ENST00000614198 DEFB121Q5J5C9 76 aa7.28□□□□□ -1.24
GGA3-221ENST00000614198 JPT2Q9H910 190 aa7.28□□□□□ -1.24
GGA3-221ENST00000614198 HTN1P15515 57 aa7.28□□□□□ -1.24
GGA3-221ENST00000614198 DEFB131AP59861 70 aa7.28□□□□□ -1.24
GGA3-221ENST00000614198 MUSTN1Q8IVN3 82 aa7.28□□□□□ -1.24
GGA3-221ENST00000614198 TRGV11A0A075B6L2 103 aa7.27□□□□□ -1.24
GGA3-221ENST00000614198 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.27□□□□□ -1.24
GGA3-221ENST00000614198 TRAV12-3A0A0B4J271 114 aa7.27□□□□□ -1.24
GGA3-221ENST00000614198 DEFB114Q30KQ6 69 aa7.27□□□□□ -1.24
GGA3-221ENST00000614198 TRAV21A0A0B4J279 112 aa7.27□□□□□ -1.25
GGA3-221ENST00000614198 IGIPA6NJ69 53 aa7.27□□□□□ -1.25
GGA3-221ENST00000614198 K7EQG2 157 aa7.27□□□□□ -1.25
GGA3-221ENST00000614198 SPINK13Q1W4C9 94 aa7.27□□□□□ -1.25
GGA3-221ENST00000614198 CEMP1Q6PRD7 247 aaPredicted RBP7.27□□□□□ -1.25
GGA3-221ENST00000614198 HRCT1Q6UXD1 115 aa7.27□□□□□ -1.25
GGA3-221ENST00000614198 DYNLRB2Q8TF09 96 aa7.27□□□□□ -1.25
GGA3-221ENST00000614198 TMEM101Q96IK0 257 aa7.27□□□□□ -1.25
GGA3-221ENST00000614198 H3BT86 120 aa7.27□□□□□ -1.25
GGA3-221ENST00000614198 ZFAND2AQ8N6M9 145 aa7.27□□□□□ -1.25
GGA3-221ENST00000614198 SPANXDQ9BXN6 97 aa7.27□□□□□ -1.25
GGA3-221ENST00000614198 IMUPQ9GZP8 106 aa7.27□□□□□ -1.25
GGA3-221ENST00000614198 H7C423 109 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 OVOL1O14753 267 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 A0A0U1RRA0 63 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 NDUFA7O95182 113 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 PPP1R17O96001 155 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 COX6CP09669 75 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 PRIMA1Q86XR5 153 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 POM121L12Q8N7R1 296 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 OR13C6PQ8NH95 151 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 MUC4Q99102 2169 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 TRAV8-3A0A0A6YYJ7 113 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 J3KT08 172 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 TRIAP1O43715 76 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 C9orf47Q6ZRZ4 202 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 C3orf22Q8N5N4 141 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 TMEM141Q96I45 108 aa7.26□□□□□ -1.25
GGA3-221ENST00000614198 SDHAF1A6NFY7 115 aa7.25□□□□□ -1.25
GGA3-221ENST00000614198 ZNRF2Q8NHG8 242 aa7.25□□□□□ -1.25
GGA3-221ENST00000614198 RBMY1BA6NDE4 496 aaKnown RBP7.25□□□□□ -1.25
GGA3-221ENST00000614198 RBMY1EA6NEQ0 496 aaKnown RBP7.25□□□□□ -1.25
GGA3-221ENST00000614198 RS1O15537 224 aa7.25□□□□□ -1.25
GGA3-221ENST00000614198 RBMY1DP0C7P1 496 aaKnown RBP7.25□□□□□ -1.25
GGA3-221ENST00000614198 C4orf26Q17RF5 130 aa7.25□□□□□ -1.25
GGA3-221ENST00000614198 RBMY1A1P0DJD3 496 aaKnown RBP7.24□□□□□ -1.25
GGA3-221ENST00000614198 RBMY1CP0DJD4 496 aa7.24□□□□□ -1.25
GGA3-221ENST00000614198 RBMY1FQ15415 496 aaKnown RBP7.24□□□□□ -1.25
GGA3-221ENST00000614198 KRTAP24-1Q3LI83 254 aa7.24□□□□□ -1.25
GGA3-221ENST00000614198 RNASE13Q5GAN3 156 aaKnown RBP7.24□□□□□ -1.25
GGA3-221ENST00000614198 LEPROTO15243 131 aa7.24□□□□□ -1.25
GGA3-221ENST00000614198 ZNF876PQ49A33 203 aa7.24□□□□□ -1.25
GGA3-221ENST00000614198 PEMTQ9UBM1 199 aa7.24□□□□□ -1.25
GGA3-221ENST00000614198 A0A1B0GX51 115 aa7.24□□□□□ -1.25
GGA3-221ENST00000614198 UQCRQO14949 82 aa7.24□□□□□ -1.25
GGA3-221ENST00000614198 CLEC2BQ92478 149 aa7.24□□□□□ -1.25
GGA3-221ENST00000614198 TIMM17AQ99595 171 aa7.24□□□□□ -1.25
GGA3-221ENST00000614198 A0A0J9YX75 114 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms