RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 TWIST1Q15672 202 aa8.34□□□□□ -1.07
CSNK1D-224ENST00000584672 C5orf38Q86SI9 138 aa8.34□□□□□ -1.07
CSNK1D-224ENST00000584672 TSKUQ8WUA8 353 aa8.34□□□□□ -1.07
CSNK1D-224ENST00000584672 CDIP1Q9H305 208 aa8.34□□□□□ -1.07
CSNK1D-224ENST00000584672 ALG5Q9Y673 324 aa8.34□□□□□ -1.07
CSNK1D-224ENST00000584672 F2Z2F3 143 aa8.33□□□□□ -1.08
CSNK1D-224ENST00000584672 IFNA1P01562 189 aa8.33□□□□□ -1.08
CSNK1D-224ENST00000584672 PMCHP20382 165 aa8.33□□□□□ -1.08
CSNK1D-224ENST00000584672 SPAG11BQ08648 103 aa8.33□□□□□ -1.08
CSNK1D-224ENST00000584672 CENPWQ5EE01 88 aa8.33□□□□□ -1.08
CSNK1D-224ENST00000584672 RNASE13Q5GAN3 156 aaKnown RBP8.33□□□□□ -1.08
CSNK1D-224ENST00000584672 SFT2D1Q8WV19 159 aa8.33□□□□□ -1.08
CSNK1D-224ENST00000584672 C2orf48Q96LS8 159 aa8.33□□□□□ -1.08
CSNK1D-224ENST00000584672 CDC42SE2Q9NRR3 84 aa8.33□□□□□ -1.08
CSNK1D-224ENST00000584672 TMEM242Q9NWH2 141 aa8.33□□□□□ -1.08
CSNK1D-224ENST00000584672 FOXA3P55318 350 aaPredicted RBP8.32□□□□□ -1.08
CSNK1D-224ENST00000584672 CARHSP1Q9Y2V2 147 aaKnown RBP8.32□□□□□ -1.08
CSNK1D-224ENST00000584672 XKRY2A2RUG3 117 aa8.31□□□□□ -1.08
CSNK1D-224ENST00000584672 C19orf71A6NCJ1 209 aa8.31□□□□□ -1.08
CSNK1D-224ENST00000584672 M0QXV9 152 aa8.31□□□□□ -1.08
CSNK1D-224ENST00000584672 GAGE2EQ4V326 116 aa8.31□□□□□ -1.08
CSNK1D-224ENST00000584672 KCNRGQ8N5I3 272 aa8.31□□□□□ -1.08
CSNK1D-224ENST00000584672 FAM213BQ8TBF2 198 aa8.31□□□□□ -1.08
CSNK1D-224ENST00000584672 MRAP2Q96G30 205 aa8.31□□□□□ -1.08
CSNK1D-224ENST00000584672 GAGE2DQ9UEU5 116 aa8.31□□□□□ -1.08
CSNK1D-224ENST00000584672 A0A087X002 238 aa8.3□□□□□ -1.08
CSNK1D-224ENST00000584672 I3L3M4 83 aa8.3□□□□□ -1.08
CSNK1D-224ENST00000584672 TSHBP01222 138 aa8.3□□□□□ -1.08
CSNK1D-224ENST00000584672 ESDP10768 282 aa8.3□□□□□ -1.08
CSNK1D-224ENST00000584672 KRTAP7-1Q8IUC3 87 aa8.3□□□□□ -1.08
CSNK1D-224ENST00000584672 RPP21Q9H633 154 aaKnown RBP8.3□□□□□ -1.08
CSNK1D-224ENST00000584672 FSIP2Q5CZC0 6907 aa8.29□□□□□ -1.08
CSNK1D-224ENST00000584672 TRAV13-1A0A0B4J241 112 aa8.29□□□□□ -1.08
CSNK1D-224ENST00000584672 RAB19A4D1S5 217 aa8.29□□□□□ -1.08
CSNK1D-224ENST00000584672 C1orf196B1AJZ1 125 aa8.29□□□□□ -1.08
CSNK1D-224ENST00000584672 CTRLP40313 264 aa8.29□□□□□ -1.08
CSNK1D-224ENST00000584672 RNF151Q2KHN1 245 aa8.28□□□□□ -1.08
CSNK1D-224ENST00000584672 C10orf25Q5T742 122 aa8.28□□□□□ -1.08
CSNK1D-224ENST00000584672 MRPL52Q86TS9 123 aaKnown RBP8.28□□□□□ -1.08
CSNK1D-224ENST00000584672 TYMSOSQ8TAI1 123 aa8.28□□□□□ -1.08
CSNK1D-224ENST00000584672 RNASE7Q9H1E1 156 aaKnown RBP8.28□□□□□ -1.08
CSNK1D-224ENST00000584672 CYTL1Q9NRR1 136 aa8.28□□□□□ -1.08
CSNK1D-224ENST00000584672 G3V3Q6 166 aa8.27□□□□□ -1.09
CSNK1D-224ENST00000584672 C9orf62Q8N4C0 152 aa8.27□□□□□ -1.09
CSNK1D-224ENST00000584672 IMMP2LQ96T52 175 aa8.27□□□□□ -1.09
CSNK1D-224ENST00000584672 ZNF861PO60384 105 aa8.26□□□□□ -1.09
CSNK1D-224ENST00000584672 LINC01547P58512 204 aaPredicted RBP8.26□□□□□ -1.09
CSNK1D-224ENST00000584672 ORAOV1Q8WV07 137 aa8.26□□□□□ -1.09
CSNK1D-224ENST00000584672 MBD3L1Q8WWY6 194 aa8.26□□□□□ -1.09
CSNK1D-224ENST00000584672 MRPL35Q9NZE8 188 aaKnown RBP8.26□□□□□ -1.09
CSNK1D-224ENST00000584672 C7orf77A4D0Y5 90 aa8.25□□□□□ -1.09
CSNK1D-224ENST00000584672 GNG4P50150 75 aa8.25□□□□□ -1.09
CSNK1D-224ENST00000584672 UNQ6190/PRO20217Q6UXQ8 127 aa8.25□□□□□ -1.09
CSNK1D-224ENST00000584672 SMIM15Q7Z3B0 74 aa8.25□□□□□ -1.09
CSNK1D-224ENST00000584672 C6orf48Q9UBA6 75 aa8.25□□□□□ -1.09
CSNK1D-224ENST00000584672 NDUFA1O15239 70 aa8.24□□□□□ -1.09
CSNK1D-224ENST00000584672 GIPP09681 153 aaPredicted RBP8.24□□□□□ -1.09
CSNK1D-224ENST00000584672 SRSF3P84103 164 aaKnown RBP8.24□□□□□ -1.09
CSNK1D-224ENST00000584672 TPRXLQ17RH7 258 aa8.24□□□□□ -1.09
CSNK1D-224ENST00000584672 RGS21Q2M5E4 152 aa8.24□□□□□ -1.09
CSNK1D-224ENST00000584672 Q6ZUT4 128 aa8.24□□□□□ -1.09
CSNK1D-224ENST00000584672 NUDT10Q8NFP7 164 aa8.24□□□□□ -1.09
CSNK1D-224ENST00000584672 C11orf52Q96A22 123 aa8.24□□□□□ -1.09
CSNK1D-224ENST00000584672 NUDT11Q96G61 164 aa8.24□□□□□ -1.09
CSNK1D-224ENST00000584672 CNFNQ9BYD5 112 aa8.24□□□□□ -1.09
CSNK1D-224ENST00000584672 SMDT1Q9H4I9 107 aa8.24□□□□□ -1.09
CSNK1D-224ENST00000584672 ST20Q9HBF5 79 aa8.24□□□□□ -1.09
CSNK1D-224ENST00000584672 ANAPC11Q9NYG5 84 aa8.24□□□□□ -1.09
CSNK1D-224ENST00000584672 GNG13Q9P2W3 67 aa8.24□□□□□ -1.09
CSNK1D-224ENST00000584672 IGLV7-46A0A075B6I9 117 aa8.23□□□□□ -1.09
CSNK1D-224ENST00000584672 TRBV6-5A0A0K0K1A5 114 aa8.23□□□□□ -1.09
CSNK1D-224ENST00000584672 TEX261Q6UWH6 196 aa8.23□□□□□ -1.09
CSNK1D-224ENST00000584672 OR10D4PQ8NGN7 298 aa8.23□□□□□ -1.09
CSNK1D-224ENST00000584672 TRBV20OR9-2A0A075B6H5 130 aa8.22□□□□□ -1.09
CSNK1D-224ENST00000584672 ARPC5O15511 151 aa8.22□□□□□ -1.09
CSNK1D-224ENST00000584672 H2AFB1P0C5Y9 115 aa8.22□□□□□ -1.09
CSNK1D-224ENST00000584672 TLX1NBP0CAT3 122 aa8.22□□□□□ -1.09
CSNK1D-224ENST00000584672 CRYGAP11844 174 aa8.22□□□□□ -1.09
CSNK1D-224ENST00000584672 CCL20P78556 96 aa8.22□□□□□ -1.09
CSNK1D-224ENST00000584672 UBE2D4Q9Y2X8 147 aa8.21□□□□□ -1.1
CSNK1D-224ENST00000584672 C9orf129Q5T035 196 aaKnown RBP8.2□□□□□ -1.1
CSNK1D-224ENST00000584672 LINC00173Q6ZV60 143 aa8.2□□□□□ -1.1
CSNK1D-224ENST00000584672 CTDSP1Q9GZU7 261 aa8.2□□□□□ -1.1
CSNK1D-224ENST00000584672 FCER1GP30273 86 aa8.19□□□□□ -1.1
CSNK1D-224ENST00000584672 POLR2KP53803 58 aaKnown RBP8.19□□□□□ -1.1
CSNK1D-224ENST00000584672 MANBALQ9NQG1 85 aa8.19□□□□□ -1.1
CSNK1D-224ENST00000584672 KRTAP13-2Q52LG2 175 aa8.18□□□□□ -1.1
CSNK1D-224ENST00000584672 LINC00304Q8N9R0 145 aa8.18□□□□□ -1.1
CSNK1D-224ENST00000584672 SMIM12Q96EX1 92 aa8.18□□□□□ -1.1
CSNK1D-224ENST00000584672 UMAD1C9J7I0 102 aa8.17□□□□□ -1.1
CSNK1D-224ENST00000584672 SMKR1H3BMG3 65 aa8.17□□□□□ -1.1
CSNK1D-224ENST00000584672 TMEM241Q24JQ0 296 aa8.17□□□□□ -1.1
CSNK1D-224ENST00000584672 BIN3Q9NQY0 253 aa8.17□□□□□ -1.1
CSNK1D-224ENST00000584672 MED9Q9NWA0 146 aa8.17□□□□□ -1.1
CSNK1D-224ENST00000584672 TRBV27A0A0K0K1C4 114 aa8.16□□□□□ -1.1
CSNK1D-224ENST00000584672 F8WDY8 70 aa8.16□□□□□ -1.1
CSNK1D-224ENST00000584672 KRTAP4-1Q9BYQ7 146 aa8.16□□□□□ -1.1
CSNK1D-224ENST00000584672 CSDC2Q9Y534 153 aaKnown RBP8.16□□□□□ -1.1
CSNK1D-224ENST00000584672 SMLR1H3BR10 107 aa8.15□□□□□ -1.1
CSNK1D-224ENST00000584672 K7EN84 100 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms