RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 AKAP14Q86UN6 197 aa2.56□□□□□ -2
DDX42-211ENST00000580108 SLC51BQ86UW2 128 aa2.56□□□□□ -2
DDX42-211ENST00000580108 LINC00269Q8N2A0 174 aa2.56□□□□□ -2
DDX42-211ENST00000580108 C20orf203Q8NBC4 194 aa2.56□□□□□ -2
DDX42-211ENST00000580108 GTSF1Q8WW33 167 aa2.56□□□□□ -2
DDX42-211ENST00000580108 AP1S3Q96PC3 154 aa2.56□□□□□ -2
DDX42-211ENST00000580108 TMEM70Q9BUB7 260 aa2.56□□□□□ -2
DDX42-211ENST00000580108 GAGE2DQ9UEU5 116 aa2.56□□□□□ -2
DDX42-211ENST00000580108 URGCP-MRPS24S4R325 110 aa2.56□□□□□ -2
DDX42-211ENST00000580108 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.55□□□□□ -2
DDX42-211ENST00000580108 IGKV2-29A2NJV5 120 aaPredicted RBP2.55□□□□□ -2
DDX42-211ENST00000580108 C9JQL5 133 aa2.55□□□□□ -2
DDX42-211ENST00000580108 SMKR1H3BMG3 65 aa2.55□□□□□ -2
DDX42-211ENST00000580108 CRPP02741 224 aa2.55□□□□□ -2
DDX42-211ENST00000580108 SMIM17P0DL12 118 aa2.55□□□□□ -2
DDX42-211ENST00000580108 NTF3P20783 257 aa2.55□□□□□ -2
DDX42-211ENST00000580108 CTRLP40313 264 aa2.55□□□□□ -2
DDX42-211ENST00000580108 RASL11AQ6T310 242 aa2.55□□□□□ -2
DDX42-211ENST00000580108 GATD1Q8NB37 220 aa2.55□□□□□ -2
DDX42-211ENST00000580108 CIRBP-AS1Q8TBR5 109 aa2.55□□□□□ -2
DDX42-211ENST00000580108 LINC00526Q96FQ7 95 aa2.55□□□□□ -2
DDX42-211ENST00000580108 PGLYRP4Q96LB8 373 aa2.55□□□□□ -2
DDX42-211ENST00000580108 RPP21Q9H633 154 aaKnown RBP2.55□□□□□ -2
DDX42-211ENST00000580108 VAX2Q9UIW0 290 aa2.55□□□□□ -2
DDX42-211ENST00000580108 LRP1Q07954 4544 aaKnown RBP2.54□□□□□ -2
DDX42-211ENST00000580108 TRBV25-1A0A075B6N4 114 aa2.54□□□□□ -2
DDX42-211ENST00000580108 IGHV1-24A0A0C4DH33 117 aa2.54□□□□□ -2
DDX42-211ENST00000580108 hDV102S1A0JD36 115 aa2.54□□□□□ -2
DDX42-211ENST00000580108 GATCO43716 136 aaKnown RBP2.54□□□□□ -2
DDX42-211ENST00000580108 PDE6DO43924 150 aa2.54□□□□□ -2
DDX42-211ENST00000580108 NCR2O95944 276 aa2.54□□□□□ -2
DDX42-211ENST00000580108 CHTF8P0CG12 524 aa2.54□□□□□ -2
DDX42-211ENST00000580108 RPS10P46783 165 aaKnown RBP2.54□□□□□ -2
DDX42-211ENST00000580108 RPS20P60866 119 aaKnown RBP2.54□□□□□ -2
DDX42-211ENST00000580108 CACNG7P62955 275 aa2.54□□□□□ -2
DDX42-211ENST00000580108 IQCJQ1A5X6 159 aa2.54□□□□□ -2
DDX42-211ENST00000580108 KCNIP4Q6PIL6 250 aa2.54□□□□□ -2
DDX42-211ENST00000580108 RMI2Q96E14 147 aa2.54□□□□□ -2
DDX42-211ENST00000580108 TMEM243Q9BU79 118 aa2.54□□□□□ -2
DDX42-211ENST00000580108 DPH3P1Q9H4G8 78 aa2.54□□□□□ -2
DDX42-211ENST00000580108 FAT3Q8TDW7 4589 aa2.54□□□□□ -2
DDX42-211ENST00000580108 FAM231BA6NCW3 169 aa2.53□□□□□ -2
DDX42-211ENST00000580108 SRP19P09132 144 aaKnown RBP2.53□□□□□ -2
DDX42-211ENST00000580108 TRGC1P0CF51 173 aa2.53□□□□□ -2
DDX42-211ENST00000580108 REG3AQ06141 175 aa2.53□□□□□ -2
DDX42-211ENST00000580108 Q0VG73 95 aa2.53□□□□□ -2
DDX42-211ENST00000580108 UBE2V1Q13404 147 aa2.53□□□□□ -2
DDX42-211ENST00000580108 ELOBQ15370 118 aa2.53□□□□□ -2
DDX42-211ENST00000580108 HIGD2BQ4VC39 106 aa2.53□□□□□ -2
DDX42-211ENST00000580108 RNASE13Q5GAN3 156 aaKnown RBP2.53□□□□□ -2
DDX42-211ENST00000580108 EIF5AL1Q6IS14 154 aaKnown RBP2.53□□□□□ -2
DDX42-211ENST00000580108 WDR73Q6P4I2 378 aa2.53□□□□□ -2
DDX42-211ENST00000580108 C15orf56Q8N910 161 aa2.53□□□□□ -2
DDX42-211ENST00000580108 RNF185Q96GF1 192 aa2.53□□□□□ -2
DDX42-211ENST00000580108 SMIM7Q9BQ49 75 aa2.53□□□□□ -2
DDX42-211ENST00000580108 CHCHD7Q9BUK0 85 aa2.53□□□□□ -2
DDX42-211ENST00000580108 CHAC1Q9BUX1 264 aa2.53□□□□□ -2
DDX42-211ENST00000580108 NIT2Q9NQR4 276 aa2.53□□□□□ -2
DDX42-211ENST00000580108 PRR34Q9NV39 138 aa2.53□□□□□ -2
DDX42-211ENST00000580108 TMEM242Q9NWH2 141 aa2.53□□□□□ -2
DDX42-211ENST00000580108 XKRY2A2RUG3 117 aa2.52□□□□□ -2.01
DDX42-211ENST00000580108 ZNF727A8MUV8 499 aa2.52□□□□□ -2.01
DDX42-211ENST00000580108 F2Z2F3 143 aa2.52□□□□□ -2.01
DDX42-211ENST00000580108 H7C1H1 209 aa2.52□□□□□ -2.01
DDX42-211ENST00000580108 TSHBP01222 138 aa2.52□□□□□ -2.01
DDX42-211ENST00000580108 LINC01547P58512 204 aaPredicted RBP2.52□□□□□ -2.01
DDX42-211ENST00000580108 COTL1Q14019 142 aa2.52□□□□□ -2.01
DDX42-211ENST00000580108 MIAQ16674 131 aa2.52□□□□□ -2.01
DDX42-211ENST00000580108 RNASEKQ6P5S7 137 aaKnown RBP2.52□□□□□ -2.01
DDX42-211ENST00000580108 LINC01551Q86U37 167 aa2.52□□□□□ -2.01
DDX42-211ENST00000580108 AMN1Q8IY45 258 aa2.52□□□□□ -2.01
DDX42-211ENST00000580108 C9orf163Q8N9P6 203 aa2.52□□□□□ -2.01
DDX42-211ENST00000580108 LYPD6BQ8NI32 183 aa2.52□□□□□ -2.01
DDX42-211ENST00000580108 CNFNQ9BYD5 112 aa2.52□□□□□ -2.01
DDX42-211ENST00000580108 EIF5A2Q9GZV4 153 aaKnown RBP2.52□□□□□ -2.01
DDX42-211ENST00000580108 IGKV2-24A0A0C4DH68 120 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 SDHAF1A6NFY7 115 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 HIGD1CA8MV81 97 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 A8MWL6 223 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 TMEM250H0YL14 139 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 UBE2L6O14933 153 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 APCSP02743 223 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 FGF6P10767 208 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 PMCHP20382 165 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 RPL37AP61513 92 aaKnown RBP2.51□□□□□ -2.01
DDX42-211ENST00000580108 RPL23P62829 140 aaKnown RBP2.51□□□□□ -2.01
DDX42-211ENST00000580108 ADIRFQ15847 76 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 TMEM97Q5BJF2 176 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 AMMECR1LQ6DCA0 310 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 SDIM1Q6ZPB5 146 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 FAM231DQ6ZW35 169 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 NUP35Q8NFH5 326 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 CHCHD10Q8WYQ3 142 aaPredicted RBP2.51□□□□□ -2.01
DDX42-211ENST00000580108 SMIM12Q96EX1 92 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 V9GYV3 84 aa2.51□□□□□ -2.01
DDX42-211ENST00000580108 A0A096LNI7 61 aa2.5□□□□□ -2.01
DDX42-211ENST00000580108 A0A1B0GUT8 65 aa2.5□□□□□ -2.01
DDX42-211ENST00000580108 CCL25O15444 150 aa2.5□□□□□ -2.01
DDX42-211ENST00000580108 ESDP10768 282 aa2.5□□□□□ -2.01
DDX42-211ENST00000580108 RAB4AP20338 218 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms