RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 MALP21145 153 aa7.14□□□□□ -1.27
GTF3C1-209ENST00000568569 CCL20P78556 96 aa7.14□□□□□ -1.27
GTF3C1-209ENST00000568569 RPL18AQ02543 176 aaKnown RBP7.14□□□□□ -1.27
GTF3C1-209ENST00000568569 TEX261Q6UWH6 196 aa7.14□□□□□ -1.27
GTF3C1-209ENST00000568569 NUP35Q8NFH5 326 aa7.14□□□□□ -1.27
GTF3C1-209ENST00000568569 CAMK2N2Q96S95 79 aa7.14□□□□□ -1.27
GTF3C1-209ENST00000568569 MANBALQ9NQG1 85 aa7.14□□□□□ -1.27
GTF3C1-209ENST00000568569 hCG_2014768A0A024R1R8 64 aa7.13□□□□□ -1.27
GTF3C1-209ENST00000568569 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.13□□□□□ -1.27
GTF3C1-209ENST00000568569 I3L3M4 83 aa7.13□□□□□ -1.27
GTF3C1-209ENST00000568569 PMCHP20382 165 aa7.13□□□□□ -1.27
GTF3C1-209ENST00000568569 MEF2BQ02080 365 aaPredicted RBP7.13□□□□□ -1.27
GTF3C1-209ENST00000568569 SMIM15Q7Z3B0 74 aa7.13□□□□□ -1.27
GTF3C1-209ENST00000568569 TSKUQ8WUA8 353 aa7.13□□□□□ -1.27
GTF3C1-209ENST00000568569 MRAP2Q96G30 205 aa7.13□□□□□ -1.27
GTF3C1-209ENST00000568569 BIN3Q9NQY0 253 aa7.13□□□□□ -1.27
GTF3C1-209ENST00000568569 GNG13Q9P2W3 67 aa7.13□□□□□ -1.27
GTF3C1-209ENST00000568569 RAB19A4D1S5 217 aa7.12□□□□□ -1.27
GTF3C1-209ENST00000568569 COX7A2LO14548 114 aa7.12□□□□□ -1.27
GTF3C1-209ENST00000568569 ESDP10768 282 aa7.12□□□□□ -1.27
GTF3C1-209ENST00000568569 MRPL52Q86TS9 123 aaKnown RBP7.12□□□□□ -1.27
GTF3C1-209ENST00000568569 CDC42SE2Q9NRR3 84 aa7.12□□□□□ -1.27
GTF3C1-209ENST00000568569 FAT4Q6V0I7 4981 aa7.12□□□□□ -1.27
GTF3C1-209ENST00000568569 A0A087WZ39 114 aa7.11□□□□□ -1.27
GTF3C1-209ENST00000568569 TRAV1-1A0A0B4J248 108 aa7.11□□□□□ -1.27
GTF3C1-209ENST00000568569 UBE2D1P51668 147 aa7.11□□□□□ -1.27
GTF3C1-209ENST00000568569 LCE2AQ5TA79 106 aaPredicted RBP7.11□□□□□ -1.27
GTF3C1-209ENST00000568569 C2orf48Q96LS8 159 aa7.11□□□□□ -1.27
GTF3C1-209ENST00000568569 FAM210AQ96ND0 272 aa7.11□□□□□ -1.27
GTF3C1-209ENST00000568569 TRBV20OR9-2A0A075B6H5 130 aa7.1□□□□□ -1.27
GTF3C1-209ENST00000568569 TRBV6-5A0A0K0K1A5 114 aa7.1□□□□□ -1.27
GTF3C1-209ENST00000568569 C1orf196B1AJZ1 125 aa7.1□□□□□ -1.27
GTF3C1-209ENST00000568569 BCL2L11O43521 198 aa7.1□□□□□ -1.27
GTF3C1-209ENST00000568569 KRTAP1-4P0C5Y4 121 aa7.1□□□□□ -1.27
GTF3C1-209ENST00000568569 RPL13AP40429 203 aaKnown RBP7.1□□□□□ -1.27
GTF3C1-209ENST00000568569 ZNF345Q14585 488 aa7.1□□□□□ -1.27
GTF3C1-209ENST00000568569 NUDT10Q8NFP7 164 aa7.1□□□□□ -1.27
GTF3C1-209ENST00000568569 NUDT11Q96G61 164 aa7.1□□□□□ -1.27
GTF3C1-209ENST00000568569 TMEM242Q9NWH2 141 aa7.1□□□□□ -1.27
GTF3C1-209ENST00000568569 C7orf77A4D0Y5 90 aa7.09□□□□□ -1.27
GTF3C1-209ENST00000568569 PDE6DO43924 150 aa7.09□□□□□ -1.27
GTF3C1-209ENST00000568569 TSHBP01222 138 aa7.09□□□□□ -1.27
GTF3C1-209ENST00000568569 FOXA3P55318 350 aaPredicted RBP7.09□□□□□ -1.27
GTF3C1-209ENST00000568569 RPP21Q9H633 154 aaKnown RBP7.09□□□□□ -1.27
GTF3C1-209ENST00000568569 SPAG11BQ08648 103 aa7.08□□□□□ -1.28
GTF3C1-209ENST00000568569 RNF151Q2KHN1 245 aa7.08□□□□□ -1.28
GTF3C1-209ENST00000568569 OPRPNQ99935 248 aaPredicted RBP7.08□□□□□ -1.28
GTF3C1-209ENST00000568569 ST20Q9HBF5 79 aa7.08□□□□□ -1.28
GTF3C1-209ENST00000568569 MED9Q9NWA0 146 aa7.08□□□□□ -1.28
GTF3C1-209ENST00000568569 A0A1B0GVG6 124 aa7.07□□□□□ -1.28
GTF3C1-209ENST00000568569 KRTAP11-1Q8IUC1 163 aa7.07□□□□□ -1.28
GTF3C1-209ENST00000568569 TRAV13-1A0A0B4J241 112 aa7.06□□□□□ -1.28
GTF3C1-209ENST00000568569 KANTRA0A1W2PQU2 76 aa7.06□□□□□ -1.28
GTF3C1-209ENST00000568569 TEX46H3BTG2 121 aa7.06□□□□□ -1.28
GTF3C1-209ENST00000568569 C5orf38Q86SI9 138 aa7.06□□□□□ -1.28
GTF3C1-209ENST00000568569 IMMP2LQ96T52 175 aa7.06□□□□□ -1.28
GTF3C1-209ENST00000568569 RNASE7Q9H1E1 156 aaKnown RBP7.06□□□□□ -1.28
GTF3C1-209ENST00000568569 MRPL35Q9NZE8 188 aaKnown RBP7.06□□□□□ -1.28
GTF3C1-209ENST00000568569 CSDC2Q9Y534 153 aaKnown RBP7.06□□□□□ -1.28
GTF3C1-209ENST00000568569 TRBV27A0A0K0K1C4 114 aa7.05□□□□□ -1.28
GTF3C1-209ENST00000568569 FAM168BA1KXE4 195 aa7.05□□□□□ -1.28
GTF3C1-209ENST00000568569 HMSDA8MTL9 139 aa7.05□□□□□ -1.28
GTF3C1-209ENST00000568569 SMAGPQ0VAQ4 97 aa7.05□□□□□ -1.28
GTF3C1-209ENST00000568569 TCTE3Q8IZS6 198 aa7.05□□□□□ -1.28
GTF3C1-209ENST00000568569 OR10D4PQ8NGN7 298 aa7.05□□□□□ -1.28
GTF3C1-209ENST00000568569 F8WDY8 70 aa7.04□□□□□ -1.28
GTF3C1-209ENST00000568569 POLR2KP53803 58 aaKnown RBP7.04□□□□□ -1.28
GTF3C1-209ENST00000568569 RNASE13Q5GAN3 156 aaKnown RBP7.04□□□□□ -1.28
GTF3C1-209ENST00000568569 FAM19A5Q7Z5A7 132 aaPredicted RBP7.04□□□□□ -1.28
GTF3C1-209ENST00000568569 AKAP14Q86UN6 197 aa7.04□□□□□ -1.28
GTF3C1-209ENST00000568569 CARHSP1Q9Y2V2 147 aaKnown RBP7.04□□□□□ -1.28
GTF3C1-209ENST00000568569 K7EN84 100 aa7.03□□□□□ -1.28
GTF3C1-209ENST00000568569 TLX1NBP0CAT3 122 aa7.03□□□□□ -1.28
GTF3C1-209ENST00000568569 FCER1GP30273 86 aa7.03□□□□□ -1.28
GTF3C1-209ENST00000568569 UBE2BP63146 152 aa7.03□□□□□ -1.28
GTF3C1-209ENST00000568569 UBE2D4Q9Y2X8 147 aa7.03□□□□□ -1.28
GTF3C1-209ENST00000568569 M0QXV9 152 aa7.02□□□□□ -1.29
GTF3C1-209ENST00000568569 NDUFA1O15239 70 aa7.02□□□□□ -1.29
GTF3C1-209ENST00000568569 LCE2DQ5TA82 110 aaPredicted RBP7.02□□□□□ -1.29
GTF3C1-209ENST00000568569 Q6ZUT4 128 aa7.02□□□□□ -1.29
GTF3C1-209ENST00000568569 ORAOV1Q8WV07 137 aa7.02□□□□□ -1.29
GTF3C1-209ENST00000568569 BORCS7Q96B45 105 aa7.02□□□□□ -1.29
GTF3C1-209ENST00000568569 VCYO14598 125 aa7.01□□□□□ -1.29
GTF3C1-209ENST00000568569 TSPAN13O95857 204 aa7.01□□□□□ -1.29
GTF3C1-209ENST00000568569 TMEM241Q24JQ0 296 aa7.01□□□□□ -1.29
GTF3C1-209ENST00000568569 GAGE2EQ4V326 116 aa7.01□□□□□ -1.29
GTF3C1-209ENST00000568569 OCC1Q8TAD7 63 aa7.01□□□□□ -1.29
GTF3C1-209ENST00000568569 SMDT1Q9H4I9 107 aa7.01□□□□□ -1.29
GTF3C1-209ENST00000568569 GAGE2DQ9UEU5 116 aa7.01□□□□□ -1.29
GTF3C1-209ENST00000568569 A8MWL6 223 aa7□□□□□ -1.29
GTF3C1-209ENST00000568569 GATCO43716 136 aaKnown RBP7□□□□□ -1.29
GTF3C1-209ENST00000568569 C10orf25Q5T742 122 aa7□□□□□ -1.29
GTF3C1-209ENST00000568569 TMEM191AQ9H0A3 160 aa7□□□□□ -1.29
GTF3C1-209ENST00000568569 TAGLN2P37802 199 aaKnown RBP6.99□□□□□ -1.29
GTF3C1-209ENST00000568569 KRTAP7-1Q8IUC3 87 aa6.99□□□□□ -1.29
GTF3C1-209ENST00000568569 KIR2DL4Q99706 377 aa6.99□□□□□ -1.29
GTF3C1-209ENST00000568569 C6orf48Q9UBA6 75 aa6.99□□□□□ -1.29
GTF3C1-209ENST00000568569 IGHV3OR16-9A0A0B4J2B5 98 aa6.98□□□□□ -1.29
GTF3C1-209ENST00000568569 A0A1B0GUT8 65 aa6.98□□□□□ -1.29
GTF3C1-209ENST00000568569 ZNF861PO60384 105 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms