RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 TMEM136Q6ZRR5 245 aa12.07□□□□□ -0.48
LINC01238-205ENST00000567549 PRSS1P07477 247 aa12.06□□□□□ -0.48
LINC01238-205ENST00000567549 CTRLP40313 264 aa12.06□□□□□ -0.48
LINC01238-205ENST00000567549 SUMO4Q6EEV6 95 aa12.06□□□□□ -0.48
LINC01238-205ENST00000567549 CLPSL2Q6UWE3 100 aa12.06□□□□□ -0.48
LINC01238-205ENST00000567549 LYZL1Q6UWQ5 148 aa12.06□□□□□ -0.48
LINC01238-205ENST00000567549 MRPL18Q9H0U6 180 aaKnown RBP12.06□□□□□ -0.48
LINC01238-205ENST00000567549 NIT2Q9NQR4 276 aa12.06□□□□□ -0.48
LINC01238-205ENST00000567549 COTL1Q14019 142 aa12.05□□□□□ -0.48
LINC01238-205ENST00000567549 SMIM15Q7Z3B0 74 aa12.05□□□□□ -0.48
LINC01238-205ENST00000567549 HIST1H2BKO60814 126 aa12.04□□□□□ -0.48
LINC01238-205ENST00000567549 APCSP02743 223 aa12.04□□□□□ -0.48
LINC01238-205ENST00000567549 HIST1H2BJP06899 126 aa12.04□□□□□ -0.48
LINC01238-205ENST00000567549 HIST1H2BOP23527 126 aa12.04□□□□□ -0.48
LINC01238-205ENST00000567549 HIST1H2BBP33778 126 aa12.04□□□□□ -0.48
LINC01238-205ENST00000567549 CAMPP49913 170 aa12.04□□□□□ -0.48
LINC01238-205ENST00000567549 HIST1H2BDP58876 126 aa12.04□□□□□ -0.48
LINC01238-205ENST00000567549 HIST1H2BCP62807 126 aa12.04□□□□□ -0.48
LINC01238-205ENST00000567549 HIST2H2BEQ16778 126 aa12.04□□□□□ -0.48
LINC01238-205ENST00000567549 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.04□□□□□ -0.48
LINC01238-205ENST00000567549 HIST1H2BHQ93079 126 aa12.04□□□□□ -0.48
LINC01238-205ENST00000567549 HIST1H2BNQ99877 126 aa12.04□□□□□ -0.48
LINC01238-205ENST00000567549 HIST1H2BMQ99879 126 aa12.04□□□□□ -0.48
LINC01238-205ENST00000567549 CNBPP62633 177 aaKnown RBP12.03□□□□□ -0.48
LINC01238-205ENST00000567549 CFAP161Q6P656 301 aa12.03□□□□□ -0.48
LINC01238-205ENST00000567549 GATD1Q8NB37 220 aa12.03□□□□□ -0.48
LINC01238-205ENST00000567549 CNFNQ9BYD5 112 aa12.03□□□□□ -0.48
LINC01238-205ENST00000567549 DNAH8Q96JB1 4490 aa12.03□□□□□ -0.48
LINC01238-205ENST00000567549 hDV102S1A0JD36 115 aa12.02□□□□□ -0.49
LINC01238-205ENST00000567549 NTF3P20783 257 aa12.02□□□□□ -0.49
LINC01238-205ENST00000567549 AMTP48728 403 aa12.02□□□□□ -0.49
LINC01238-205ENST00000567549 IGHV3-64A0A075B6Q5 118 aa12.01□□□□□ -0.49
LINC01238-205ENST00000567549 RNF185Q96GF1 192 aa12.01□□□□□ -0.49
LINC01238-205ENST00000567549 IGLV10-54A0A075B6I4 117 aa12□□□□□ -0.49
LINC01238-205ENST00000567549 NDUFA6P56556 154 aa12□□□□□ -0.49
LINC01238-205ENST00000567549 TWIST1Q15672 202 aa12□□□□□ -0.49
LINC01238-205ENST00000567549 DPH3Q96FX2 82 aa12□□□□□ -0.49
LINC01238-205ENST00000567549 C5orf52A6NGY3 159 aa11.99□□□□□ -0.49
LINC01238-205ENST00000567549 KRTAP10-4P60372 401 aaPredicted RBP11.99□□□□□ -0.49
LINC01238-205ENST00000567549 C20orf203Q8NBC4 194 aa11.99□□□□□ -0.49
LINC01238-205ENST00000567549 LOC105371267A0A1B0GV96 52 aa11.98□□□□□ -0.49
LINC01238-205ENST00000567549 NCR2O95944 276 aa11.98□□□□□ -0.49
LINC01238-205ENST00000567549 AMMECR1LQ6DCA0 310 aa11.98□□□□□ -0.49
LINC01238-205ENST00000567549 KRTAP26-1Q6PEX3 210 aa11.98□□□□□ -0.49
LINC01238-205ENST00000567549 SDIM1Q6ZPB5 146 aa11.98□□□□□ -0.49
LINC01238-205ENST00000567549 PKIGQ9Y2B9 76 aa11.98□□□□□ -0.49
LINC01238-205ENST00000567549 H7C423 109 aa11.97□□□□□ -0.49
LINC01238-205ENST00000567549 SNRPEP62304 92 aaKnown RBP11.97□□□□□ -0.49
LINC01238-205ENST00000567549 COA6Q5JTJ3 125 aaKnown RBP11.97□□□□□ -0.49
LINC01238-205ENST00000567549 TMEM191AQ9H0A3 160 aa11.97□□□□□ -0.49
LINC01238-205ENST00000567549 IGLV4-60A0A075B6I1 120 aa11.95□□□□□ -0.5
LINC01238-205ENST00000567549 FAM104BQ5XKR9 115 aa11.95□□□□□ -0.5
LINC01238-205ENST00000567549 CIRBPQ14011 172 aaKnown RBP11.94□□□□□ -0.5
LINC01238-205ENST00000567549 KIAA1644Q3SXP7 199 aa11.94□□□□□ -0.5
LINC01238-205ENST00000567549 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.94□□□□□ -0.5
LINC01238-205ENST00000567549 Q6ZRU5 148 aa11.93□□□□□ -0.5
LINC01238-205ENST00000567549 C7orf33Q8WU49 177 aa11.93□□□□□ -0.5
LINC01238-205ENST00000567549 ALKBH7Q9BT30 221 aaPredicted RBP11.93□□□□□ -0.5
LINC01238-205ENST00000567549 ZNF25P17030 456 aaPredicted RBP11.92□□□□□ -0.5
LINC01238-205ENST00000567549 BAGE3Q86Y29 109 aa11.92□□□□□ -0.5
LINC01238-205ENST00000567549 PPBPP02775 128 aa11.91□□□□□ -0.5
LINC01238-205ENST00000567549 RNASEKQ6P5S7 137 aaKnown RBP11.91□□□□□ -0.5
LINC01238-205ENST00000567549 TMEM101Q96IK0 257 aa11.91□□□□□ -0.5
LINC01238-205ENST00000567549 PLA2G2DQ9UNK4 145 aa11.91□□□□□ -0.5
LINC01238-205ENST00000567549 GAGE12HA6NDE8 117 aa11.9□□□□□ -0.5
LINC01238-205ENST00000567549 IGKV3OR2-268A0A0C4DH90 116 aa11.89□□□□□ -0.51
LINC01238-205ENST00000567549 RAB4AP20338 218 aa11.89□□□□□ -0.51
LINC01238-205ENST00000567549 S100A2P29034 98 aa11.89□□□□□ -0.51
LINC01238-205ENST00000567549 MRPL51Q4U2R6 128 aaKnown RBP11.89□□□□□ -0.51
LINC01238-205ENST00000567549 AMN1Q8IY45 258 aa11.89□□□□□ -0.51
LINC01238-205ENST00000567549 ORMDL3Q8N138 153 aa11.89□□□□□ -0.51
LINC01238-205ENST00000567549 PMCHP20382 165 aa11.88□□□□□ -0.51
LINC01238-205ENST00000567549 HIST3H2BBQ8N257 126 aa11.88□□□□□ -0.51
LINC01238-205ENST00000567549 C18orf32Q8TCD1 76 aa11.88□□□□□ -0.51
LINC01238-205ENST00000567549 SPACA4Q8TDM5 124 aa11.88□□□□□ -0.51
LINC01238-205ENST00000567549 LINC00474Q9P2X8 69 aa11.88□□□□□ -0.51
LINC01238-205ENST00000567549 LAMTOR2Q9Y2Q5 125 aa11.88□□□□□ -0.51
LINC01238-205ENST00000567549 A0A087WYN8 130 aa11.87□□□□□ -0.51
LINC01238-205ENST00000567549 SDHAF1A6NFY7 115 aa11.87□□□□□ -0.51
LINC01238-205ENST00000567549 I3L3M4 83 aa11.87□□□□□ -0.51
LINC01238-205ENST00000567549 ESDP10768 282 aa11.87□□□□□ -0.51
LINC01238-205ENST00000567549 CKS2P33552 79 aa11.87□□□□□ -0.51
LINC01238-205ENST00000567549 SMAGPQ0VAQ4 97 aa11.87□□□□□ -0.51
LINC01238-205ENST00000567549 CHCHD10Q8WYQ3 142 aaPredicted RBP11.87□□□□□ -0.51
LINC01238-205ENST00000567549 TRAV26-2A0A0B4J265 109 aa11.86□□□□□ -0.51
LINC01238-205ENST00000567549 FGF6P10767 208 aa11.86□□□□□ -0.51
LINC01238-205ENST00000567549 MRAP2Q96G30 205 aa11.86□□□□□ -0.51
LINC01238-205ENST00000567549 PRELID3AQ96N28 172 aa11.86□□□□□ -0.51
LINC01238-205ENST00000567549 PANO1I0J062 215 aa11.85□□□□□ -0.51
LINC01238-205ENST00000567549 C15orf56Q8N910 161 aa11.85□□□□□ -0.51
LINC01238-205ENST00000567549 OR5A1Q8NGJ0 315 aa11.85□□□□□ -0.51
LINC01238-205ENST00000567549 TMEM18Q96B42 140 aa11.85□□□□□ -0.51
LINC01238-205ENST00000567549 PLAC8Q9NZF1 115 aa11.85□□□□□ -0.51
LINC01238-205ENST00000567549 GVQW2A0A096LPI5 108 aaPredicted RBP11.84□□□□□ -0.51
LINC01238-205ENST00000567549 TRBV6-5A0A0K0K1A5 114 aa11.84□□□□□ -0.51
LINC01238-205ENST00000567549 D6R8Y8 96 aa11.84□□□□□ -0.51
LINC01238-205ENST00000567549 RPL39LQ96EH5 51 aaKnown RBP11.84□□□□□ -0.51
LINC01238-205ENST00000567549 PACRGQ96M98 296 aaPredicted RBP11.84□□□□□ -0.51
LINC01238-205ENST00000567549 ST20Q9HBF5 79 aa11.84□□□□□ -0.51
LINC01238-205ENST00000567549 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms