RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-229ENST00000565580 FOXA3P55318 350 aaPredicted RBP4.07□□□□□ -1.76
TCF4-229ENST00000565580 RPL37AP61513 92 aaKnown RBP4.07□□□□□ -1.76
TCF4-229ENST00000565580 GATD1Q8NB37 220 aa4.07□□□□□ -1.76
TCF4-229ENST00000565580 OCC1Q8TAD7 63 aa4.07□□□□□ -1.76
TCF4-229ENST00000565580 PGLYRP4Q96LB8 373 aa4.07□□□□□ -1.76
TCF4-229ENST00000565580 RPP21Q9H633 154 aaKnown RBP4.07□□□□□ -1.76
TCF4-229ENST00000565580 TRAV8-4A0A0B4J246 113 aa4.06□□□□□ -1.76
TCF4-229ENST00000565580 hDV102S1A0JD36 115 aa4.06□□□□□ -1.76
TCF4-229ENST00000565580 OXTP01178 125 aa4.06□□□□□ -1.76
TCF4-229ENST00000565580 CHTF8P0CG12 524 aa4.06□□□□□ -1.76
TCF4-229ENST00000565580 AMTP48728 403 aa4.06□□□□□ -1.76
TCF4-229ENST00000565580 CNBPP62633 177 aaKnown RBP4.06□□□□□ -1.76
TCF4-229ENST00000565580 CIRBPQ14011 172 aaKnown RBP4.06□□□□□ -1.76
TCF4-229ENST00000565580 COTL1Q14019 142 aa4.06□□□□□ -1.76
TCF4-229ENST00000565580 TWIST1Q15672 202 aa4.06□□□□□ -1.76
TCF4-229ENST00000565580 WDR73Q6P4I2 378 aa4.06□□□□□ -1.76
TCF4-229ENST00000565580 GTSF1Q8WW33 167 aa4.06□□□□□ -1.76
TCF4-229ENST00000565580 RPL39LQ96EH5 51 aaKnown RBP4.06□□□□□ -1.76
TCF4-229ENST00000565580 CNFNQ9BYD5 112 aa4.06□□□□□ -1.76
TCF4-229ENST00000565580 BIN3Q9NQY0 253 aa4.06□□□□□ -1.76
TCF4-229ENST00000565580 IGKV3OR2-268A0A0C4DH90 116 aa4.05□□□□□ -1.76
TCF4-229ENST00000565580 UBE2L6O14933 153 aa4.05□□□□□ -1.76
TCF4-229ENST00000565580 APOC3P02656 99 aa4.05□□□□□ -1.76
TCF4-229ENST00000565580 C15orf56Q8N910 161 aa4.05□□□□□ -1.76
TCF4-229ENST00000565580 IGHV3-64A0A075B6Q5 118 aa4.04□□□□□ -1.76
TCF4-229ENST00000565580 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.04□□□□□ -1.76
TCF4-229ENST00000565580 IGKV2-29A2NJV5 120 aaPredicted RBP4.04□□□□□ -1.76
TCF4-229ENST00000565580 F8W036 122 aa4.04□□□□□ -1.76
TCF4-229ENST00000565580 GAS8-AS1O95177 125 aa4.04□□□□□ -1.76
TCF4-229ENST00000565580 RHEBQ15382 184 aa4.04□□□□□ -1.76
TCF4-229ENST00000565580 HIGD2BQ4VC39 106 aa4.04□□□□□ -1.76
TCF4-229ENST00000565580 FAM74A3Q4VXF1 159 aa4.04□□□□□ -1.76
TCF4-229ENST00000565580 SPACA4Q8TDM5 124 aa4.04□□□□□ -1.76
TCF4-229ENST00000565580 A0A087WYN8 130 aa4.03□□□□□ -1.76
TCF4-229ENST00000565580 FAM231BA6NCW3 169 aa4.03□□□□□ -1.76
TCF4-229ENST00000565580 SDHAF1A6NFY7 115 aa4.03□□□□□ -1.76
TCF4-229ENST00000565580 TMEM250H0YL14 139 aa4.03□□□□□ -1.76
TCF4-229ENST00000565580 GATCO43716 136 aaKnown RBP4.03□□□□□ -1.76
TCF4-229ENST00000565580 MT1HL1P0DM35 61 aa4.03□□□□□ -1.76
TCF4-229ENST00000565580 FGF6P10767 208 aa4.03□□□□□ -1.76
TCF4-229ENST00000565580 PNRC1Q12796 327 aaPredicted RBP4.03□□□□□ -1.76
TCF4-229ENST00000565580 SERTAD4-AS1Q5TG53 156 aa4.03□□□□□ -1.76
TCF4-229ENST00000565580 AMMECR1LQ6DCA0 310 aa4.03□□□□□ -1.76
TCF4-229ENST00000565580 RNASEKQ6P5S7 137 aaKnown RBP4.03□□□□□ -1.76
TCF4-229ENST00000565580 FAM231DQ6ZW35 169 aa4.03□□□□□ -1.76
TCF4-229ENST00000565580 CHCHD10Q8WYQ3 142 aaPredicted RBP4.03□□□□□ -1.76
TCF4-229ENST00000565580 SMCO4Q9NRQ5 59 aa4.03□□□□□ -1.76
TCF4-229ENST00000565580 TMEM242Q9NWH2 141 aa4.03□□□□□ -1.76
TCF4-229ENST00000565580 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.02□□□□□ -1.77
TCF4-229ENST00000565580 NCR2O95944 276 aa4.02□□□□□ -1.77
TCF4-229ENST00000565580 APCSP02743 223 aa4.02□□□□□ -1.77
TCF4-229ENST00000565580 CEBPGP53567 150 aa4.02□□□□□ -1.77
TCF4-229ENST00000565580 COX6A2Q02221 97 aa4.02□□□□□ -1.77
TCF4-229ENST00000565580 FOXI1Q12951 378 aa4.02□□□□□ -1.77
TCF4-229ENST00000565580 SMIM15Q7Z3B0 74 aa4.02□□□□□ -1.77
TCF4-229ENST00000565580 PRSS3P2Q8NHM4 247 aa4.02□□□□□ -1.77
TCF4-229ENST00000565580 DPH3Q96FX2 82 aa4.02□□□□□ -1.77
TCF4-229ENST00000565580 RNF185Q96GF1 192 aa4.02□□□□□ -1.77
TCF4-229ENST00000565580 EIF5A2Q9GZV4 153 aaKnown RBP4.02□□□□□ -1.77
TCF4-229ENST00000565580 PLAC8Q9NZF1 115 aa4.02□□□□□ -1.77
TCF4-229ENST00000565580 TNXBP22105 4242 aa4.01□□□□□ -1.77
TCF4-229ENST00000565580 GVQW2A0A096LPI5 108 aaPredicted RBP4.01□□□□□ -1.77
TCF4-229ENST00000565580 IGKV2-24A0A0C4DH68 120 aa4.01□□□□□ -1.77
TCF4-229ENST00000565580 TRBV6-5A0A0K0K1A5 114 aa4.01□□□□□ -1.77
TCF4-229ENST00000565580 A8MWL6 223 aa4.01□□□□□ -1.77
TCF4-229ENST00000565580 H7C423 109 aa4.01□□□□□ -1.77
TCF4-229ENST00000565580 I3L3M4 83 aa4.01□□□□□ -1.77
TCF4-229ENST00000565580 PHOX2AO14813 284 aa4.01□□□□□ -1.77
TCF4-229ENST00000565580 TSHBP01222 138 aa4.01□□□□□ -1.77
TCF4-229ENST00000565580 SRP19P09132 144 aaKnown RBP4.01□□□□□ -1.77
TCF4-229ENST00000565580 ESDP10768 282 aa4.01□□□□□ -1.77
TCF4-229ENST00000565580 ADCYAP1P18509 176 aa4.01□□□□□ -1.77
TCF4-229ENST00000565580 PMCHP20382 165 aa4.01□□□□□ -1.77
TCF4-229ENST00000565580 RPS10P46783 165 aaKnown RBP4.01□□□□□ -1.77
TCF4-229ENST00000565580 CFAP161Q6P656 301 aa4.01□□□□□ -1.77
TCF4-229ENST00000565580 LINC01551Q86U37 167 aa4.01□□□□□ -1.77
TCF4-229ENST00000565580 LINC00526Q96FQ7 95 aa4.01□□□□□ -1.77
TCF4-229ENST00000565580 A0A096LNI7 61 aa4□□□□□ -1.77
TCF4-229ENST00000565580 LINC00959A0A1B0GUT2 108 aa4□□□□□ -1.77
TCF4-229ENST00000565580 HIGD1CA8MV81 97 aa4□□□□□ -1.77
TCF4-229ENST00000565580 SMKR1H3BMG3 65 aa4□□□□□ -1.77
TCF4-229ENST00000565580 CCL25O15444 150 aa4□□□□□ -1.77
TCF4-229ENST00000565580 MT-ND4LP03901 98 aa4□□□□□ -1.77
TCF4-229ENST00000565580 XCL1P47992 114 aa4□□□□□ -1.77
TCF4-229ENST00000565580 POLR2KP53803 58 aaKnown RBP4□□□□□ -1.77
TCF4-229ENST00000565580 MAJINQ3KP22 176 aa4□□□□□ -1.77
TCF4-229ENST00000565580 Q6ZRU5 148 aa4□□□□□ -1.77
TCF4-229ENST00000565580 AMN1Q8IY45 258 aa4□□□□□ -1.77
TCF4-229ENST00000565580 OR5A1Q8NGJ0 315 aa4□□□□□ -1.77
TCF4-229ENST00000565580 TSKUQ8WUA8 353 aa4□□□□□ -1.77
TCF4-229ENST00000565580 BTF3L4Q96K17 158 aa4□□□□□ -1.77
TCF4-229ENST00000565580 SMIM7Q9BQ49 75 aa4□□□□□ -1.77
TCF4-229ENST00000565580 CTDSP1Q9GZU7 261 aa4□□□□□ -1.77
TCF4-229ENST00000565580 TMEM191AQ9H0A3 160 aa4□□□□□ -1.77
TCF4-229ENST00000565580 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
TCF4-229ENST00000565580 A0A1B0GUT8 65 aa3.99□□□□□ -1.77
TCF4-229ENST00000565580 C7orf77A4D0Y5 90 aa3.99□□□□□ -1.77
TCF4-229ENST00000565580 PRSS47A8MTI9 375 aa3.99□□□□□ -1.77
TCF4-229ENST00000565580 C9JQL5 133 aa3.99□□□□□ -1.77
TCF4-229ENST00000565580 ZNF25P17030 456 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms