RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 RETNQ9HD89 108 aa9.68□□□□□ -0.86
TPM1-215ENST00000558868 CMYA5Q8N3K9 4069 aa9.67□□□□□ -0.86
TPM1-215ENST00000558868 TRBV6-8A0A0A6YYG3 113 aa9.67□□□□□ -0.86
TPM1-215ENST00000558868 F5H768 121 aa9.67□□□□□ -0.86
TPM1-215ENST00000558868 K7EIL1 84 aa9.67□□□□□ -0.86
TPM1-215ENST00000558868 HNRNPA3P51991 378 aaKnown RBP9.67□□□□□ -0.86
TPM1-215ENST00000558868 HERVK_113P61574 105 aa9.67□□□□□ -0.86
TPM1-215ENST00000558868 ANKRD39Q53RE8 183 aa9.67□□□□□ -0.86
TPM1-215ENST00000558868 SBSPONQ8IVN8 264 aa9.67□□□□□ -0.86
TPM1-215ENST00000558868 TMEM101Q96IK0 257 aa9.67□□□□□ -0.86
TPM1-215ENST00000558868 TRAV26-1A0A087WT03 109 aa9.66□□□□□ -0.86
TPM1-215ENST00000558868 FGF6P10767 208 aa9.66□□□□□ -0.86
TPM1-215ENST00000558868 ZNF25P17030 456 aaPredicted RBP9.66□□□□□ -0.86
TPM1-215ENST00000558868 DEFB121Q5J5C9 76 aa9.66□□□□□ -0.86
TPM1-215ENST00000558868 AMMECR1LQ6DCA0 310 aa9.66□□□□□ -0.86
TPM1-215ENST00000558868 NFE4Q86UQ8 179 aa9.66□□□□□ -0.86
TPM1-215ENST00000558868 OPRPNQ99935 248 aaPredicted RBP9.66□□□□□ -0.86
TPM1-215ENST00000558868 IGLV4-69A0A075B6H9 119 aa9.65□□□□□ -0.86
TPM1-215ENST00000558868 DLEU1O43261 78 aa9.65□□□□□ -0.86
TPM1-215ENST00000558868 C12orf74Q32Q52 190 aa9.65□□□□□ -0.86
TPM1-215ENST00000558868 OR5A1Q8NGJ0 315 aa9.65□□□□□ -0.86
TPM1-215ENST00000558868 MRPS16Q9Y3D3 137 aaKnown RBP9.65□□□□□ -0.86
TPM1-215ENST00000558868 C11orf86A6NJI1 115 aa9.64□□□□□ -0.87
TPM1-215ENST00000558868 HTN3P15516 51 aa9.64□□□□□ -0.87
TPM1-215ENST00000558868 NMUP48645 174 aa9.64□□□□□ -0.87
TPM1-215ENST00000558868 MRPL23Q16540 153 aaKnown RBP9.64□□□□□ -0.87
TPM1-215ENST00000558868 CEMP1Q6PRD7 247 aaPredicted RBP9.64□□□□□ -0.87
TPM1-215ENST00000558868 VSIG2Q96IQ7 327 aa9.64□□□□□ -0.87
TPM1-215ENST00000558868 ICOSQ9Y6W8 199 aa9.64□□□□□ -0.87
TPM1-215ENST00000558868 EPPK1P58107 5090 aaKnown RBP9.63□□□□□ -0.87
TPM1-215ENST00000558868 A0A0J9YY99 117 aa9.63□□□□□ -0.87
TPM1-215ENST00000558868 H3BNG1 76 aa9.63□□□□□ -0.87
TPM1-215ENST00000558868 Q6ZUT4 128 aa9.63□□□□□ -0.87
TPM1-215ENST00000558868 TM2D3Q9BRN9 247 aa9.63□□□□□ -0.87
TPM1-215ENST00000558868 CHCHD5Q9BSY4 110 aa9.63□□□□□ -0.87
TPM1-215ENST00000558868 CHAC1Q9BUX1 264 aa9.63□□□□□ -0.87
TPM1-215ENST00000558868 DNAH3Q8TD57 4116 aa9.62□□□□□ -0.87
TPM1-215ENST00000558868 A0A0J9YWU9 116 aa9.62□□□□□ -0.87
TPM1-215ENST00000558868 E9PLD3 99 aa9.62□□□□□ -0.87
TPM1-215ENST00000558868 SIVA1O15304 175 aa9.62□□□□□ -0.87
TPM1-215ENST00000558868 PRB2P02812 416 aaPredicted RBP9.62□□□□□ -0.87
TPM1-215ENST00000558868 SEC11AP67812 179 aa9.62□□□□□ -0.87
TPM1-215ENST00000558868 TMEM170BQ5T4T1 132 aa9.62□□□□□ -0.87
TPM1-215ENST00000558868 BOD1L2Q8IYS8 172 aa9.62□□□□□ -0.87
TPM1-215ENST00000558868 FAM104AQ969W3 186 aa9.62□□□□□ -0.87
TPM1-215ENST00000558868 A0A0J9YXV3 536 aa9.61□□□□□ -0.87
TPM1-215ENST00000558868 TINCRA0A1B0GVN0 87 aa9.61□□□□□ -0.87
TPM1-215ENST00000558868 M0R143 59 aa9.61□□□□□ -0.87
TPM1-215ENST00000558868 CTAG1AP78358 180 aa9.61□□□□□ -0.87
TPM1-215ENST00000558868 C11orf45Q8TAV5 145 aa9.61□□□□□ -0.87
TPM1-215ENST00000558868 CDC42SE2Q9NRR3 84 aa9.61□□□□□ -0.87
TPM1-215ENST00000558868 GAGE6Q13070 117 aa9.6□□□□□ -0.87
TPM1-215ENST00000558868 GEMIN7Q9H840 131 aaKnown RBP9.6□□□□□ -0.87
TPM1-215ENST00000558868 UBE2D1P51668 147 aa9.59□□□□□ -0.87
TPM1-215ENST00000558868 TCTAP57738 103 aa9.59□□□□□ -0.87
TPM1-215ENST00000558868 TIRAPP58753 221 aa9.59□□□□□ -0.87
TPM1-215ENST00000558868 LBHQ53QV2 105 aaPredicted RBP9.59□□□□□ -0.87
TPM1-215ENST00000558868 RNASE13Q5GAN3 156 aaKnown RBP9.59□□□□□ -0.87
TPM1-215ENST00000558868 FAM19A3Q7Z5A8 133 aa9.59□□□□□ -0.87
TPM1-215ENST00000558868 IGKV2D-26A0A0A0MRZ7 120 aa9.58□□□□□ -0.88
TPM1-215ENST00000558868 H3BRM9 83 aa9.58□□□□□ -0.88
TPM1-215ENST00000558868 ZNF22P17026 224 aaPredicted RBP9.58□□□□□ -0.88
TPM1-215ENST00000558868 HERVK_113P63121 156 aa9.58□□□□□ -0.88
TPM1-215ENST00000558868 PCP2Q8IVA1 136 aa9.58□□□□□ -0.88
TPM1-215ENST00000558868 MRAPQ8TCY5 172 aa9.58□□□□□ -0.88
TPM1-215ENST00000558868 TRAV8-6A0A0B4J262 113 aa9.57□□□□□ -0.88
TPM1-215ENST00000558868 A0A1B0GUV1 79 aa9.57□□□□□ -0.88
TPM1-215ENST00000558868 TMEM223A0PJW6 202 aa9.57□□□□□ -0.88
TPM1-215ENST00000558868 Q6ZTC4 211 aa9.57□□□□□ -0.88
TPM1-215ENST00000558868 PLEKHB2Q96CS7 222 aa9.57□□□□□ -0.88
TPM1-215ENST00000558868 A0A096LPF7 62 aa9.56□□□□□ -0.88
TPM1-215ENST00000558868 TMEM262E9PQX1 116 aa9.56□□□□□ -0.88
TPM1-215ENST00000558868 LEPROTO15243 131 aa9.56□□□□□ -0.88
TPM1-215ENST00000558868 LELP1Q5T871 98 aa9.56□□□□□ -0.88
TPM1-215ENST00000558868 HIGD1BQ9P298 99 aa9.56□□□□□ -0.88
TPM1-215ENST00000558868 DEFB131BA0A096LNP1 70 aa9.55□□□□□ -0.88
TPM1-215ENST00000558868 MYMXA0A1B0GTQ4 84 aa9.55□□□□□ -0.88
TPM1-215ENST00000558868 NANOS2P60321 138 aaKnown RBP9.55□□□□□ -0.88
TPM1-215ENST00000558868 C2orf91Q6ZV80 131 aa9.55□□□□□ -0.88
TPM1-215ENST00000558868 LINC00469Q8N7U9 141 aa9.55□□□□□ -0.88
TPM1-215ENST00000558868 IGLV5-45A0A087WSX0 123 aa9.54□□□□□ -0.88
TPM1-215ENST00000558868 TRAV10A0A0B4J240 114 aa9.54□□□□□ -0.88
TPM1-215ENST00000558868 TRAV13-1A0A0B4J241 112 aa9.54□□□□□ -0.88
TPM1-215ENST00000558868 LGALS3P17931 250 aaKnown RBP9.54□□□□□ -0.88
TPM1-215ENST00000558868 SNHG12Q9BXW3 62 aa9.54□□□□□ -0.88
TPM1-215ENST00000558868 J3QQQ9 107 aa9.53□□□□□ -0.88
TPM1-215ENST00000558868 CCL25O15444 150 aa9.53□□□□□ -0.88
TPM1-215ENST00000558868 RBX1P62877 108 aa9.53□□□□□ -0.88
TPM1-215ENST00000558868 HSD52Q0P140 79 aa9.53□□□□□ -0.88
TPM1-215ENST00000558868 LINC00242Q5T6M2 205 aa9.53□□□□□ -0.88
TPM1-215ENST00000558868 B9D2Q9BPU9 175 aa9.53□□□□□ -0.88
TPM1-215ENST00000558868 IGLV4-60A0A075B6I1 120 aa9.52□□□□□ -0.89
TPM1-215ENST00000558868 IGHV1-58A0A0C4DH39 117 aa9.52□□□□□ -0.89
TPM1-215ENST00000558868 ZNF815PA8K554 130 aa9.52□□□□□ -0.89
TPM1-215ENST00000558868 MAPKAPK5-AS1Q8N8E1 139 aa9.52□□□□□ -0.89
TPM1-215ENST00000558868 TP73-AS1Q9UF72 201 aa9.52□□□□□ -0.89
TPM1-215ENST00000558868 EREGO14944 169 aa9.51□□□□□ -0.89
TPM1-215ENST00000558868 LYPD5Q6UWN5 251 aa9.51□□□□□ -0.89
TPM1-215ENST00000558868 TTTY13Q9BZ97 58 aa9.51□□□□□ -0.89
TPM1-215ENST00000558868 HINT1P49773 126 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 527 ms