RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 APOMO95445 188 aa3.99□□□□□ -1.77
ATXN3-224ENST00000554040 CRYGAP11844 174 aa3.99□□□□□ -1.77
ATXN3-224ENST00000554040 DEFA3P59666 94 aa3.99□□□□□ -1.77
ATXN3-224ENST00000554040 NUP35Q8NFH5 326 aa3.99□□□□□ -1.77
ATXN3-224ENST00000554040 AP1S3Q96PC3 154 aa3.99□□□□□ -1.77
ATXN3-224ENST00000554040 NUDT15Q9NV35 164 aa3.99□□□□□ -1.77
ATXN3-224ENST00000554040 IGLV7-46A0A075B6I9 117 aa3.98□□□□□ -1.77
ATXN3-224ENST00000554040 CCL25O15444 150 aa3.98□□□□□ -1.77
ATXN3-224ENST00000554040 LYRM1O43325 122 aa3.98□□□□□ -1.77
ATXN3-224ENST00000554040 LTAP01374 205 aa3.98□□□□□ -1.77
ATXN3-224ENST00000554040 IL7P13232 177 aa3.98□□□□□ -1.77
ATXN3-224ENST00000554040 AMMECR1LQ6DCA0 310 aa3.98□□□□□ -1.77
ATXN3-224ENST00000554040 RNASEKQ6P5S7 137 aaKnown RBP3.98□□□□□ -1.77
ATXN3-224ENST00000554040 RASL11AQ6T310 242 aa3.98□□□□□ -1.77
ATXN3-224ENST00000554040 OR5A1Q8NGJ0 315 aa3.98□□□□□ -1.77
ATXN3-224ENST00000554040 FMC1Q96HJ9 113 aa3.98□□□□□ -1.77
ATXN3-224ENST00000554040 RETNLBQ9BQ08 111 aa3.98□□□□□ -1.77
ATXN3-224ENST00000554040 NKX6-2Q9C056 277 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-224ENST00000554040 NIT2Q9NQR4 276 aa3.98□□□□□ -1.77
ATXN3-224ENST00000554040 LINC00959A0A1B0GUT2 108 aa3.97□□□□□ -1.77
ATXN3-224ENST00000554040 FAM74A7A6NL05 159 aa3.97□□□□□ -1.77
ATXN3-224ENST00000554040 H7C423 109 aa3.97□□□□□ -1.77
ATXN3-224ENST00000554040 MBP02144 154 aa3.97□□□□□ -1.77
ATXN3-224ENST00000554040 MGPP08493 103 aa3.97□□□□□ -1.77
ATXN3-224ENST00000554040 ATP6V0CP27449 155 aa3.97□□□□□ -1.77
ATXN3-224ENST00000554040 UBE2G2P60604 165 aa3.97□□□□□ -1.77
ATXN3-224ENST00000554040 UBE2G1P62253 170 aa3.97□□□□□ -1.77
ATXN3-224ENST00000554040 RPL18AQ02543 176 aaKnown RBP3.97□□□□□ -1.77
ATXN3-224ENST00000554040 EIF5AL1Q6IS14 154 aaKnown RBP3.97□□□□□ -1.77
ATXN3-224ENST00000554040 CD164L2Q6UWJ8 174 aa3.97□□□□□ -1.77
ATXN3-224ENST00000554040 PET117Q6UWS5 81 aa3.97□□□□□ -1.77
ATXN3-224ENST00000554040 PPP1R1CQ8WVI7 109 aa3.97□□□□□ -1.77
ATXN3-224ENST00000554040 CAMK2N2Q96S95 79 aa3.97□□□□□ -1.77
ATXN3-224ENST00000554040 ACTR3CQ9C0K3 210 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-224ENST00000554040 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-224ENST00000554040 A0A087X002 238 aa3.96□□□□□ -1.78
ATXN3-224ENST00000554040 FAM168BA1KXE4 195 aa3.96□□□□□ -1.78
ATXN3-224ENST00000554040 IGKV2-29A2NJV5 120 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-224ENST00000554040 ZNF861PO60384 105 aa3.96□□□□□ -1.78
ATXN3-224ENST00000554040 MPC2O95563 127 aa3.96□□□□□ -1.78
ATXN3-224ENST00000554040 SERF2P84101 59 aa3.96□□□□□ -1.78
ATXN3-224ENST00000554040 TYMSOSQ8TAI1 123 aa3.96□□□□□ -1.78
ATXN3-224ENST00000554040 C2orf48Q96LS8 159 aa3.96□□□□□ -1.78
ATXN3-224ENST00000554040 OPRPNQ99935 248 aaPredicted RBP3.96□□□□□ -1.78
ATXN3-224ENST00000554040 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
ATXN3-224ENST00000554040 C19orf71A6NCJ1 209 aa3.95□□□□□ -1.78
ATXN3-224ENST00000554040 BCL2L11O43521 198 aa3.95□□□□□ -1.78
ATXN3-224ENST00000554040 ESDP10768 282 aa3.95□□□□□ -1.78
ATXN3-224ENST00000554040 NTF3P20783 257 aa3.95□□□□□ -1.78
ATXN3-224ENST00000554040 SS18Q15532 418 aa3.95□□□□□ -1.78
ATXN3-224ENST00000554040 PSMG3Q9BT73 122 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-224ENST00000554040 KRTAP4-1Q9BYQ7 146 aa3.95□□□□□ -1.78
ATXN3-224ENST00000554040 TNFSF18Q9UNG2 199 aa3.95□□□□□ -1.78
ATXN3-224ENST00000554040 NCR2O95944 276 aa3.94□□□□□ -1.78
ATXN3-224ENST00000554040 PET100P0DJ07 73 aa3.94□□□□□ -1.78
ATXN3-224ENST00000554040 ZNF25P17030 456 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-224ENST00000554040 H2BFSP57053 126 aa3.94□□□□□ -1.78
ATXN3-224ENST00000554040 UBE2BP63146 152 aa3.94□□□□□ -1.78
ATXN3-224ENST00000554040 ASB16-AS1Q495Z4 193 aa3.94□□□□□ -1.78
ATXN3-224ENST00000554040 LINC00173Q6ZV60 143 aa3.94□□□□□ -1.78
ATXN3-224ENST00000554040 KRTAP7-1Q8IUC3 87 aa3.94□□□□□ -1.78
ATXN3-224ENST00000554040 TMEM101Q96IK0 257 aa3.94□□□□□ -1.78
ATXN3-224ENST00000554040 BTF3L4Q96K17 158 aa3.94□□□□□ -1.78
ATXN3-224ENST00000554040 FAM240BA0A1B0GVZ2 78 aa3.93□□□□□ -1.78
ATXN3-224ENST00000554040 CCDC160A6NGH7 325 aa3.93□□□□□ -1.78
ATXN3-224ENST00000554040 ZNF726P1Q15940 193 aa3.93□□□□□ -1.78
ATXN3-224ENST00000554040 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
ATXN3-224ENST00000554040 FAM19A5Q7Z5A7 132 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-224ENST00000554040 OCC1Q8TAD7 63 aa3.93□□□□□ -1.78
ATXN3-224ENST00000554040 IMMP2LQ96T52 175 aa3.93□□□□□ -1.78
ATXN3-224ENST00000554040 TCEAL7Q9BRU2 100 aa3.93□□□□□ -1.78
ATXN3-224ENST00000554040 TPPP3Q9BW30 176 aa3.93□□□□□ -1.78
ATXN3-224ENST00000554040 PPDPFQ9H3Y8 114 aa3.93□□□□□ -1.78
ATXN3-224ENST00000554040 CDC42SE2Q9NRR3 84 aa3.93□□□□□ -1.78
ATXN3-224ENST00000554040 USH2AO75445 5202 aa3.93□□□□□ -1.78
ATXN3-224ENST00000554040 CTXND1A0A1B0GTU2 59 aa3.92□□□□□ -1.78
ATXN3-224ENST00000554040 G3V3Q6 166 aa3.92□□□□□ -1.78
ATXN3-224ENST00000554040 COX7A2LO14548 114 aa3.92□□□□□ -1.78
ATXN3-224ENST00000554040 TSHBP01222 138 aa3.92□□□□□ -1.78
ATXN3-224ENST00000554040 APCSP02743 223 aa3.92□□□□□ -1.78
ATXN3-224ENST00000554040 S100A9P06702 114 aaKnown RBP3.92□□□□□ -1.78
ATXN3-224ENST00000554040 CFC1BP0CG36 223 aa3.92□□□□□ -1.78
ATXN3-224ENST00000554040 AKR1C3P42330 323 aa3.92□□□□□ -1.78
ATXN3-224ENST00000554040 FHITP49789 147 aa3.92□□□□□ -1.78
ATXN3-224ENST00000554040 BAGE2Q86Y30 109 aa3.92□□□□□ -1.78
ATXN3-224ENST00000554040 GATD1Q8NB37 220 aa3.92□□□□□ -1.78
ATXN3-224ENST00000554040 OR2D3Q8NGH3 330 aa3.92□□□□□ -1.78
ATXN3-224ENST00000554040 CCDC32Q9BV29 185 aa3.92□□□□□ -1.78
ATXN3-224ENST00000554040 MRPL35Q9NZE8 188 aaKnown RBP3.92□□□□□ -1.78
ATXN3-224ENST00000554040 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
ATXN3-224ENST00000554040 C1orf196B1AJZ1 125 aa3.91□□□□□ -1.78
ATXN3-224ENST00000554040 INMT-MINDY4F8WBC2 141 aa3.91□□□□□ -1.78
ATXN3-224ENST00000554040 M0QXV9 152 aa3.91□□□□□ -1.78
ATXN3-224ENST00000554040 TLX1NBP0CAT3 122 aa3.91□□□□□ -1.78
ATXN3-224ENST00000554040 TRGC1P0CF51 173 aa3.91□□□□□ -1.78
ATXN3-224ENST00000554040 IGLC6P0CF74 106 aa3.91□□□□□ -1.78
ATXN3-224ENST00000554040 CTAG1AP78358 180 aa3.91□□□□□ -1.78
ATXN3-224ENST00000554040 GAGE2EQ4V326 116 aa3.91□□□□□ -1.78
ATXN3-224ENST00000554040 KRTAP13-2Q52LG2 175 aa3.91□□□□□ -1.78
ATXN3-224ENST00000554040 LINC00337Q8N6G1 96 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms