RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 UBE2D3P61077 147 aa3.54□□□□□ -1.84
AC078880.2-201ENST00000547948 HERVK_113P61574 105 aa3.54□□□□□ -1.84
AC078880.2-201ENST00000547948 UBE2D2P62837 147 aa3.54□□□□□ -1.84
AC078880.2-201ENST00000547948 GAGE1Q13065 139 aa3.54□□□□□ -1.84
AC078880.2-201ENST00000547948 GAGE4Q13068 117 aa3.54□□□□□ -1.84
AC078880.2-201ENST00000547948 GAGE5Q13069 117 aa3.54□□□□□ -1.84
AC078880.2-201ENST00000547948 NEGR1Q7Z3B1 354 aa3.54□□□□□ -1.84
AC078880.2-201ENST00000547948 C20orf203Q8NBC4 194 aa3.54□□□□□ -1.84
AC078880.2-201ENST00000547948 TMEM101Q96IK0 257 aa3.54□□□□□ -1.84
AC078880.2-201ENST00000547948 HHLA3Q9XRX5 114 aa3.54□□□□□ -1.84
AC078880.2-201ENST00000547948 PYGO1Q9Y3Y4 419 aa3.54□□□□□ -1.84
AC078880.2-201ENST00000547948 WNK1Q9H4A3 2382 aa3.54□□□□□ -1.84
AC078880.2-201ENST00000547948 VWFP04275 2813 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 TRAV26-1A0A087WT03 109 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 A0A087WX48 190 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 F8VRH5 84 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 IGKCP01834 107 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 P0DMU3 169 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 FAM231AP0DMU4 169 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 FAM231CP0DMU5 169 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 ZNF25P17030 456 aaPredicted RBP3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 SEC11AP67812 179 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 PMVKQ15126 192 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 KRTAP21-3Q3LHN1 58 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 SPATA45Q537H7 98 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 AMMECR1LQ6DCA0 310 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 PHLDA1Q8WV24 401 aaPredicted RBP3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 PMCHL2Q9BQD1 86 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 TMEM243Q9BU79 118 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 TIMM21Q9BVV7 248 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 PAM16Q9Y3D7 125 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 CHTOPQ9Y3Y2 248 aaKnown RBP3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 ICOSQ9Y6W8 199 aa3.53□□□□□ -1.84
AC078880.2-201ENST00000547948 IGHV3-38A0A0C4DH36 116 aa3.52□□□□□ -1.85
AC078880.2-201ENST00000547948 F5H768 121 aa3.52□□□□□ -1.85
AC078880.2-201ENST00000547948 H3BNG1 76 aa3.52□□□□□ -1.85
AC078880.2-201ENST00000547948 MRPL23Q16540 153 aaKnown RBP3.52□□□□□ -1.85
AC078880.2-201ENST00000547948 DEFB121Q5J5C9 76 aa3.52□□□□□ -1.85
AC078880.2-201ENST00000547948 LINC00173Q6ZV60 143 aa3.52□□□□□ -1.85
AC078880.2-201ENST00000547948 MRPL52Q86TS9 123 aaKnown RBP3.52□□□□□ -1.85
AC078880.2-201ENST00000547948 Q8N976 141 aa3.52□□□□□ -1.85
AC078880.2-201ENST00000547948 OR5A1Q8NGJ0 315 aa3.52□□□□□ -1.85
AC078880.2-201ENST00000547948 ATP6V0E2Q8NHE4 81 aa3.52□□□□□ -1.85
AC078880.2-201ENST00000547948 C11orf45Q8TAV5 145 aa3.52□□□□□ -1.85
AC078880.2-201ENST00000547948 BAALCQ8WXS3 180 aa3.52□□□□□ -1.85
AC078880.2-201ENST00000547948 VCX2Q9H322 139 aa3.52□□□□□ -1.85
AC078880.2-201ENST00000547948 UQCR10Q9UDW1 63 aa3.52□□□□□ -1.85
AC078880.2-201ENST00000547948 DNAH3Q8TD57 4116 aa3.52□□□□□ -1.85
AC078880.2-201ENST00000547948 TRRAPQ9Y4A5 3859 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 CMYA5Q8N3K9 4069 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 IGLV4-3A0A075B6K6 122 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 TRBV6-8A0A0A6YYG3 113 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 IGIPA6NJ69 53 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 PCP4L1A6NKN8 68 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 K7EIL1 84 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 DEFB4AO15263 64 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 LINC00694P0DN24 101 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 HTN3P15516 51 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 RPL39P62891 51 aaKnown RBP3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 MRPS36P82909 103 aaKnown RBP3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 ATOH7Q8N100 152 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 MRAPQ8TCY5 172 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 TM2D3Q9BRN9 247 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 CHCHD5Q9BSY4 110 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 CHCHD7Q9BUK0 85 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 RETNQ9HD89 108 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 MRPL35Q9NZE8 188 aaKnown RBP3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 CELA1Q9UNI1 258 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 UBE2D4Q9Y2X8 147 aa3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 CSDC2Q9Y534 153 aaKnown RBP3.51□□□□□ -1.85
AC078880.2-201ENST00000547948 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 TRAV10A0A0B4J240 114 aa3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 A0A0J9YWU9 116 aa3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 IGKV2-29A2NJV5 120 aaPredicted RBP3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 H3BRM9 83 aa3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 FGF6P10767 208 aa3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 DDTP30046 118 aa3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 NMUP48645 174 aa3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 HNRNPA3P51991 378 aaKnown RBP3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 DEFA6Q01524 100 aa3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 ZC2HC1BQ5TFG8 222 aa3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 SLC25A34Q6PIV7 304 aa3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 SBSPONQ8IVN8 264 aa3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 ZNF664Q8N3J9 261 aa3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 B9D2Q9BPU9 175 aa3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 MIEN1Q9BRT3 115 aa3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 CHAC1Q9BUX1 264 aa3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 CST9LQ9H4G1 147 aa3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 GEMIN7Q9H840 131 aaKnown RBP3.5□□□□□ -1.85
AC078880.2-201ENST00000547948 TRAV8-6A0A0B4J262 113 aa3.49□□□□□ -1.85
AC078880.2-201ENST00000547948 A0A0J9YY99 117 aa3.49□□□□□ -1.85
AC078880.2-201ENST00000547948 LOC100131303A0A0U1RQF7 123 aa3.49□□□□□ -1.85
AC078880.2-201ENST00000547948 hDV102S1A0JD36 115 aa3.49□□□□□ -1.85
AC078880.2-201ENST00000547948 C11orf86A6NJI1 115 aa3.49□□□□□ -1.85
AC078880.2-201ENST00000547948 IGLC3P0DOY3 106 aa3.49□□□□□ -1.85
AC078880.2-201ENST00000547948 HERVK_113P63121 156 aa3.49□□□□□ -1.85
AC078880.2-201ENST00000547948 C12orf74Q32Q52 190 aa3.49□□□□□ -1.85
AC078880.2-201ENST00000547948 TMEM170BQ5T4T1 132 aa3.49□□□□□ -1.85
AC078880.2-201ENST00000547948 Q6ZTC4 211 aa3.49□□□□□ -1.85
AC078880.2-201ENST00000547948 Q6ZUT4 128 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms