RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 CST9LQ9H4G1 147 aa11□□□□□ -0.65
XRCC1-202ENST00000543982 UBE2D4Q9Y2X8 147 aa11□□□□□ -0.65
XRCC1-202ENST00000543982 DNAH7Q8WXX0 4024 aa11□□□□□ -0.65
XRCC1-202ENST00000543982 H3BNG1 76 aa10.99□□□□□ -0.65
XRCC1-202ENST00000543982 PAPPA-AS1Q5QFB9 102 aa10.99□□□□□ -0.65
XRCC1-202ENST00000543982 OPRPNQ99935 248 aaPredicted RBP10.99□□□□□ -0.65
XRCC1-202ENST00000543982 MIEN1Q9BRT3 115 aa10.99□□□□□ -0.65
XRCC1-202ENST00000543982 SPANXA1Q9NS26 97 aa10.99□□□□□ -0.65
XRCC1-202ENST00000543982 IGLV4-3A0A075B6K6 122 aa10.99□□□□□ -0.65
XRCC1-202ENST00000543982 TRBV6-8A0A0A6YYG3 113 aa10.99□□□□□ -0.65
XRCC1-202ENST00000543982 LINC00587B1AMM8 73 aa10.99□□□□□ -0.65
XRCC1-202ENST00000543982 IGLL5B9A064 214 aa10.99□□□□□ -0.65
XRCC1-202ENST00000543982 STPG4Q8N801 248 aa10.99□□□□□ -0.65
XRCC1-202ENST00000543982 LYPD5Q6UWN5 251 aa10.98□□□□□ -0.65
XRCC1-202ENST00000543982 C14orf144Q96I85 54 aa10.98□□□□□ -0.65
XRCC1-202ENST00000543982 ZC2HC1BQ5TFG8 222 aa10.97□□□□□ -0.65
XRCC1-202ENST00000543982 LINC00469Q8N7U9 141 aa10.97□□□□□ -0.65
XRCC1-202ENST00000543982 TIMM21Q9BVV7 248 aa10.97□□□□□ -0.65
XRCC1-202ENST00000543982 VCX2Q9H322 139 aa10.97□□□□□ -0.65
XRCC1-202ENST00000543982 UQCR10Q9UDW1 63 aa10.97□□□□□ -0.65
XRCC1-202ENST00000543982 ESRGQ1W209 222 aa10.97□□□□□ -0.65
XRCC1-202ENST00000543982 TMEM97Q5BJF2 176 aa10.97□□□□□ -0.65
XRCC1-202ENST00000543982 Q8N3U1 123 aa10.97□□□□□ -0.65
XRCC1-202ENST00000543982 ANKRD39Q53RE8 183 aa10.96□□□□□ -0.65
XRCC1-202ENST00000543982 TRBV25-1A0A075B6N4 114 aa10.96□□□□□ -0.66
XRCC1-202ENST00000543982 AMELXQ99217 191 aa10.96□□□□□ -0.66
XRCC1-202ENST00000543982 TMEM243Q9BU79 118 aa10.96□□□□□ -0.66
XRCC1-202ENST00000543982 STARD9Q9P2P6 4700 aa10.95□□□□□ -0.66
XRCC1-202ENST00000543982 IGLV4-69A0A075B6H9 119 aa10.95□□□□□ -0.66
XRCC1-202ENST00000543982 GAGE6Q13070 117 aa10.95□□□□□ -0.66
XRCC1-202ENST00000543982 MRPL52Q86TS9 123 aaKnown RBP10.95□□□□□ -0.66
XRCC1-202ENST00000543982 CSDC2Q9Y534 153 aaKnown RBP10.95□□□□□ -0.66
XRCC1-202ENST00000543982 PLECQ15149 4684 aaKnown RBP10.95□□□□□ -0.66
XRCC1-202ENST00000543982 MRPS36P82909 103 aaKnown RBP10.94□□□□□ -0.66
XRCC1-202ENST00000543982 SMAGPQ0VAQ4 97 aa10.94□□□□□ -0.66
XRCC1-202ENST00000543982 H7C423 109 aa10.94□□□□□ -0.66
XRCC1-202ENST00000543982 FGF6P10767 208 aa10.94□□□□□ -0.66
XRCC1-202ENST00000543982 RNASE13Q5GAN3 156 aaKnown RBP10.94□□□□□ -0.66
XRCC1-202ENST00000543982 DGAT2L7PQ6IED9 249 aa10.94□□□□□ -0.66
XRCC1-202ENST00000543982 TENM2Q9NT68 2774 aa10.92□□□□□ -0.66
XRCC1-202ENST00000543982 UBE2L6O14933 153 aa10.92□□□□□ -0.66
XRCC1-202ENST00000543982 ZFAND6Q6FIF0 208 aa10.92□□□□□ -0.66
XRCC1-202ENST00000543982 Q6ZUT4 128 aa10.92□□□□□ -0.66
XRCC1-202ENST00000543982 CHCHD5Q9BSY4 110 aa10.92□□□□□ -0.66
XRCC1-202ENST00000543982 C11orf86A6NJI1 115 aa10.92□□□□□ -0.66
XRCC1-202ENST00000543982 COX8AP10176 69 aa10.92□□□□□ -0.66
XRCC1-202ENST00000543982 SLC25A34Q6PIV7 304 aa10.92□□□□□ -0.66
XRCC1-202ENST00000543982 NFE4Q86UQ8 179 aa10.92□□□□□ -0.66
XRCC1-202ENST00000543982 APLNQ9ULZ1 77 aa10.92□□□□□ -0.66
XRCC1-202ENST00000543982 IGLV4-60A0A075B6I1 120 aa10.91□□□□□ -0.66
XRCC1-202ENST00000543982 TCTAP57738 103 aa10.91□□□□□ -0.66
XRCC1-202ENST00000543982 LELP1Q5T871 98 aa10.91□□□□□ -0.66
XRCC1-202ENST00000543982 SH2D6Q7Z4S9 175 aa10.91□□□□□ -0.66
XRCC1-202ENST00000543982 NMUP48645 174 aa10.9□□□□□ -0.66
XRCC1-202ENST00000543982 AMMECR1LQ6DCA0 310 aa10.9□□□□□ -0.66
XRCC1-202ENST00000543982 C15orf53Q8NAA6 179 aa10.9□□□□□ -0.66
XRCC1-202ENST00000543982 C2orf88Q9BSF0 95 aa10.9□□□□□ -0.66
XRCC1-202ENST00000543982 IGKV2D-26A0A0A0MRZ7 120 aa10.89□□□□□ -0.67
XRCC1-202ENST00000543982 ZNF25P17030 456 aaPredicted RBP10.89□□□□□ -0.67
XRCC1-202ENST00000543982 HNRNPA3P51991 378 aaKnown RBP10.89□□□□□ -0.67
XRCC1-202ENST00000543982 MPV17L2Q567V2 206 aa10.89□□□□□ -0.67
XRCC1-202ENST00000543982 WFDC10BQ8IUB3 73 aa10.89□□□□□ -0.67
XRCC1-202ENST00000543982 OR5A1Q8NGJ0 315 aa10.89□□□□□ -0.67
XRCC1-202ENST00000543982 CDC42SE2Q9NRR3 84 aa10.89□□□□□ -0.67
XRCC1-202ENST00000543982 LINC00588Q9Y4M8 146 aa10.89□□□□□ -0.67
XRCC1-202ENST00000543982 A0A0J9YXV3 536 aa10.88□□□□□ -0.67
XRCC1-202ENST00000543982 TIRAPP58753 221 aa10.88□□□□□ -0.67
XRCC1-202ENST00000543982 TMEM101Q96IK0 257 aa10.88□□□□□ -0.67
XRCC1-202ENST00000543982 CHAC1Q9BUX1 264 aa10.88□□□□□ -0.67
XRCC1-202ENST00000543982 TMEM262E9PQX1 116 aa10.88□□□□□ -0.67
XRCC1-202ENST00000543982 BOD1L2Q8IYS8 172 aa10.88□□□□□ -0.67
XRCC1-202ENST00000543982 LYSTQ99698 3801 aa10.88□□□□□ -0.67
XRCC1-202ENST00000543982 RBX1P62877 108 aa10.87□□□□□ -0.67
XRCC1-202ENST00000543982 TMEM170BQ5T4T1 132 aa10.87□□□□□ -0.67
XRCC1-202ENST00000543982 TP73-AS1Q9UF72 201 aa10.87□□□□□ -0.67
XRCC1-202ENST00000543982 E9PLD3 99 aa10.86□□□□□ -0.67
XRCC1-202ENST00000543982 DLEU1O43261 78 aa10.86□□□□□ -0.67
XRCC1-202ENST00000543982 UBE2D1P51668 147 aa10.86□□□□□ -0.67
XRCC1-202ENST00000543982 PCP2Q8IVA1 136 aa10.86□□□□□ -0.67
XRCC1-202ENST00000543982 MRPS16Q9Y3D3 137 aaKnown RBP10.86□□□□□ -0.67
XRCC1-202ENST00000543982 TINCRA0A1B0GVN0 87 aa10.86□□□□□ -0.67
XRCC1-202ENST00000543982 NUPR2A6NF83 97 aa10.85□□□□□ -0.67
XRCC1-202ENST00000543982 ZNF22P17026 224 aaPredicted RBP10.85□□□□□ -0.67
XRCC1-202ENST00000543982 HERVK_113P61574 105 aa10.85□□□□□ -0.67
XRCC1-202ENST00000543982 MUC7Q8TAX7 377 aa10.85□□□□□ -0.67
XRCC1-202ENST00000543982 DNAH1Q9P2D7 4330 aa10.84□□□□□ -0.67
XRCC1-202ENST00000543982 TRAV8-6A0A0B4J262 113 aa10.83□□□□□ -0.68
XRCC1-202ENST00000543982 IGHV3-30P01768 117 aa10.83□□□□□ -0.68
XRCC1-202ENST00000543982 IGHV3-33P01772 117 aa10.83□□□□□ -0.68
XRCC1-202ENST00000543982 IGHV3-30-3P0DP02 117 aa10.83□□□□□ -0.68
XRCC1-202ENST00000543982 IGHV3-30-5P0DP03 117 aa10.83□□□□□ -0.68
XRCC1-202ENST00000543982 FAM19A3Q7Z5A8 133 aa10.83□□□□□ -0.68
XRCC1-202ENST00000543982 A0A1B0GUV1 79 aa10.83□□□□□ -0.68
XRCC1-202ENST00000543982 TMEM223A0PJW6 202 aa10.83□□□□□ -0.68
XRCC1-202ENST00000543982 WWC2-AS2Q96NR7 200 aa10.83□□□□□ -0.68
XRCC1-202ENST00000543982 TTTY13Q9BZ97 58 aa10.83□□□□□ -0.68
XRCC1-202ENST00000543982 SIVA1O15304 175 aa10.82□□□□□ -0.68
XRCC1-202ENST00000543982 SEC11AP67812 179 aa10.82□□□□□ -0.68
XRCC1-202ENST00000543982 CLPSL2Q6UWE3 100 aa10.82□□□□□ -0.68
XRCC1-202ENST00000543982 C2orf91Q6ZV80 131 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms