RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 RBX1P62877 108 aa6.42□□□□□ -1.38
TNFRSF1A-214ENST00000543048 RNF185Q96GF1 192 aa6.42□□□□□ -1.38
TNFRSF1A-214ENST00000543048 C1orf43Q9BWL3 253 aa6.42□□□□□ -1.38
TNFRSF1A-214ENST00000543048 HIST1H2BKO60814 126 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 PPBPP02775 128 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 HIST1H2BJP06899 126 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 RAB4AP20338 218 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 HIST1H2BOP23527 126 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 HIST1H2BBP33778 126 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 HIST1H2BDP58876 126 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 LINC00310P59036 64 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 HIST1H2BCP62807 126 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 MIAQ16674 131 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 HIST2H2BEQ16778 126 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 KIAA1644Q3SXP7 199 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 MRPL51Q4U2R6 128 aaKnown RBP6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 HIST1H2BHQ93079 126 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 MRAP2Q96G30 205 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 HIST1H2BNQ99877 126 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 HIST1H2BMQ99879 126 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 TMEM243Q9BU79 118 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 KRTAP9-9Q9BYP9 154 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 KRTAP9-4Q9BYQ2 154 aa6.41□□□□□ -1.38
TNFRSF1A-214ENST00000543048 TRAV26-2A0A0B4J265 109 aa6.4□□□□□ -1.38
TNFRSF1A-214ENST00000543048 A0A1B0GUV1 79 aa6.4□□□□□ -1.38
TNFRSF1A-214ENST00000543048 D6R8Y8 96 aa6.4□□□□□ -1.38
TNFRSF1A-214ENST00000543048 CKS2P33552 79 aa6.4□□□□□ -1.38
TNFRSF1A-214ENST00000543048 COTL1Q14019 142 aa6.4□□□□□ -1.38
TNFRSF1A-214ENST00000543048 ORMDL3Q8N138 153 aa6.4□□□□□ -1.38
TNFRSF1A-214ENST00000543048 LINC00269Q8N2A0 174 aa6.4□□□□□ -1.38
TNFRSF1A-214ENST00000543048 TMEM70Q9BUB7 260 aa6.4□□□□□ -1.38
TNFRSF1A-214ENST00000543048 PRR34Q9NV39 138 aa6.4□□□□□ -1.38
TNFRSF1A-214ENST00000543048 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.39□□□□□ -1.39
TNFRSF1A-214ENST00000543048 UBE2L6O14933 153 aa6.39□□□□□ -1.39
TNFRSF1A-214ENST00000543048 C14orf177Q52M58 125 aa6.39□□□□□ -1.39
TNFRSF1A-214ENST00000543048 DEFB104AQ8WTQ1 72 aa6.39□□□□□ -1.39
TNFRSF1A-214ENST00000543048 RPL39LQ96EH5 51 aaKnown RBP6.39□□□□□ -1.39
TNFRSF1A-214ENST00000543048 PRELID3AQ96N28 172 aa6.39□□□□□ -1.39
TNFRSF1A-214ENST00000543048 ALKBH7Q9BT30 221 aaPredicted RBP6.39□□□□□ -1.39
TNFRSF1A-214ENST00000543048 LAMTOR2Q9Y2Q5 125 aa6.39□□□□□ -1.39
TNFRSF1A-214ENST00000543048 EPM2AB3EWF7 344 aa6.38□□□□□ -1.39
TNFRSF1A-214ENST00000543048 NCR2O95944 276 aa6.38□□□□□ -1.39
TNFRSF1A-214ENST00000543048 AMTP48728 403 aa6.38□□□□□ -1.39
TNFRSF1A-214ENST00000543048 C20orf203Q8NBC4 194 aa6.38□□□□□ -1.39
TNFRSF1A-214ENST00000543048 IGLV4-60A0A075B6I1 120 aa6.37□□□□□ -1.39
TNFRSF1A-214ENST00000543048 TRAV8-4A0A0B4J246 113 aa6.37□□□□□ -1.39
TNFRSF1A-214ENST00000543048 SDHAF1A6NFY7 115 aa6.37□□□□□ -1.39
TNFRSF1A-214ENST00000543048 SMKR1H3BMG3 65 aa6.37□□□□□ -1.39
TNFRSF1A-214ENST00000543048 I3L3M4 83 aa6.37□□□□□ -1.39
TNFRSF1A-214ENST00000543048 PPP1R17O96001 155 aa6.37□□□□□ -1.39
TNFRSF1A-214ENST00000543048 NPYP01303 97 aa6.37□□□□□ -1.39
TNFRSF1A-214ENST00000543048 S100A6P06703 90 aa6.37□□□□□ -1.39
TNFRSF1A-214ENST00000543048 PMCHP20382 165 aa6.37□□□□□ -1.39
TNFRSF1A-214ENST00000543048 REG3AQ06141 175 aa6.37□□□□□ -1.39
TNFRSF1A-214ENST00000543048 CLPSL2Q6UWE3 100 aa6.37□□□□□ -1.39
TNFRSF1A-214ENST00000543048 C18orf32Q8TCD1 76 aa6.37□□□□□ -1.39
TNFRSF1A-214ENST00000543048 ST20Q9HBF5 79 aa6.37□□□□□ -1.39
TNFRSF1A-214ENST00000543048 FAM30AQ9NZY2 134 aa6.37□□□□□ -1.39
TNFRSF1A-214ENST00000543048 SRRM2Q9UQ35 2752 aaKnown RBP6.36□□□□□ -1.39
TNFRSF1A-214ENST00000543048 TRBV6-5A0A0K0K1A5 114 aa6.36□□□□□ -1.39
TNFRSF1A-214ENST00000543048 H7C423 109 aa6.36□□□□□ -1.39
TNFRSF1A-214ENST00000543048 TNFRSF6BO95407 300 aa6.36□□□□□ -1.39
TNFRSF1A-214ENST00000543048 SMR3BP02814 79 aaPredicted RBP6.36□□□□□ -1.39
TNFRSF1A-214ENST00000543048 NDUFA6P56556 154 aa6.36□□□□□ -1.39
TNFRSF1A-214ENST00000543048 COA6Q5JTJ3 125 aaKnown RBP6.36□□□□□ -1.39
TNFRSF1A-214ENST00000543048 KRTAP26-1Q6PEX3 210 aa6.36□□□□□ -1.39
TNFRSF1A-214ENST00000543048 NRACQ8N912 160 aa6.36□□□□□ -1.39
TNFRSF1A-214ENST00000543048 MAP1LC3AQ9H492 121 aa6.36□□□□□ -1.39
TNFRSF1A-214ENST00000543048 IGLV10-54A0A075B6I4 117 aa6.35□□□□□ -1.39
TNFRSF1A-214ENST00000543048 USP17L23D6RBM5 183 aa6.35□□□□□ -1.39
TNFRSF1A-214ENST00000543048 GAS8-AS1O95177 125 aa6.35□□□□□ -1.39
TNFRSF1A-214ENST00000543048 AMMECR1LQ6DCA0 310 aa6.35□□□□□ -1.39
TNFRSF1A-214ENST00000543048 DGAT2L7PQ6IED9 249 aa6.35□□□□□ -1.39
TNFRSF1A-214ENST00000543048 BAGE3Q86Y29 109 aa6.35□□□□□ -1.39
TNFRSF1A-214ENST00000543048 FAT1Q14517 4588 aa6.35□□□□□ -1.39
TNFRSF1A-214ENST00000543048 SERF1AO75920 110 aa6.34□□□□□ -1.39
TNFRSF1A-214ENST00000543048 POLR2KP53803 58 aaKnown RBP6.34□□□□□ -1.39
TNFRSF1A-214ENST00000543048 SUMO2P61956 95 aaKnown RBP6.34□□□□□ -1.39
TNFRSF1A-214ENST00000543048 HAMPP81172 84 aa6.34□□□□□ -1.39
TNFRSF1A-214ENST00000543048 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.39
TNFRSF1A-214ENST00000543048 LINC01620Q4KN68 170 aa6.34□□□□□ -1.39
TNFRSF1A-214ENST00000543048 Q5VSD8 79 aa6.34□□□□□ -1.39
TNFRSF1A-214ENST00000543048 RNASEKQ6P5S7 137 aaKnown RBP6.34□□□□□ -1.39
TNFRSF1A-214ENST00000543048 Q6ZSA8 131 aa6.34□□□□□ -1.39
TNFRSF1A-214ENST00000543048 C20orf78Q9BR46 151 aa6.34□□□□□ -1.39
TNFRSF1A-214ENST00000543048 NXT2Q9NPJ8 142 aaKnown RBP6.34□□□□□ -1.39
TNFRSF1A-214ENST00000543048 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.33□□□□□ -1.4
TNFRSF1A-214ENST00000543048 IGKV2-29A2NJV5 120 aaPredicted RBP6.33□□□□□ -1.4
TNFRSF1A-214ENST00000543048 PRSS47A8MTI9 375 aa6.33□□□□□ -1.4
TNFRSF1A-214ENST00000543048 VCYO14598 125 aa6.33□□□□□ -1.4
TNFRSF1A-214ENST00000543048 PRSS1P07477 247 aa6.33□□□□□ -1.4
TNFRSF1A-214ENST00000543048 INAFM2P0DMQ5 153 aa6.33□□□□□ -1.4
TNFRSF1A-214ENST00000543048 FGF6P10767 208 aa6.33□□□□□ -1.4
TNFRSF1A-214ENST00000543048 ESDP10768 282 aa6.33□□□□□ -1.4
TNFRSF1A-214ENST00000543048 RPL32P62910 135 aaKnown RBP6.33□□□□□ -1.4
TNFRSF1A-214ENST00000543048 FA2HQ7L5A8 372 aa6.33□□□□□ -1.4
TNFRSF1A-214ENST00000543048 PRSS3P2Q8NHM4 247 aa6.33□□□□□ -1.4
TNFRSF1A-214ENST00000543048 CHCHD1Q96BP2 118 aaKnown RBP6.33□□□□□ -1.4
TNFRSF1A-214ENST00000543048 SMIM2Q9BVW6 85 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 262 ms