RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 GOSR2O14653 212 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 CASQ2O14958 399 aaPredicted RBP0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 AGPAT2O15120 278 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 ZNF25P17030 456 aaPredicted RBP0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 FGF7P21781 194 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 RPL12P30050 165 aaKnown RBP0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 FOXA3P55318 350 aaPredicted RBP0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 RND3P61587 244 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 COTL1Q14019 142 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 CNPY1Q3B7I2 92 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 Q5XG85 94 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 C2orf66Q6UXQ4 117 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 TMEM136Q6ZRR5 245 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 PCP2Q8IVA1 136 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 ZFP82Q8N141 532 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 SMCR5Q8TEV8 140 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 C11orf52Q96A22 123 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 Q96NJ1 140 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 NMES1Q9C002 83 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 ATG5Q9H1Y0 275 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 EFCAB1Q9HAE3 211 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 LYRM2Q9NU23 88 aaPredicted RBP0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 NKIRAS1Q9NYS0 192 aa0.75□□□□□ -2.29
TRAV1-1-201ENST00000542354 SMCO3A2RU48 225 aa0.74□□□□□ -2.29
TRAV1-1-201ENST00000542354 M0R378 163 aa0.74□□□□□ -2.29
TRAV1-1-201ENST00000542354 B3GALNT1O75752 331 aa0.74□□□□□ -2.29
TRAV1-1-201ENST00000542354 MT1EP04732 61 aa0.74□□□□□ -2.29
TRAV1-1-201ENST00000542354 ARMS2P0C7Q2 107 aa0.74□□□□□ -2.29
TRAV1-1-201ENST00000542354 TPT1P13693 172 aaKnown RBP0.74□□□□□ -2.29
TRAV1-1-201ENST00000542354 NCS1P62166 190 aa0.74□□□□□ -2.29
TRAV1-1-201ENST00000542354 AKAP14Q86UN6 197 aa0.74□□□□□ -2.29
TRAV1-1-201ENST00000542354 IFT20Q8IY31 132 aa0.74□□□□□ -2.29
TRAV1-1-201ENST00000542354 MT1MQ8N339 61 aa0.74□□□□□ -2.29
TRAV1-1-201ENST00000542354 OR51S1Q8NGJ8 323 aa0.74□□□□□ -2.29
TRAV1-1-201ENST00000542354 PLAC4Q8WY50 150 aa0.74□□□□□ -2.29
TRAV1-1-201ENST00000542354 NDFIP1Q9BT67 221 aa0.74□□□□□ -2.29
TRAV1-1-201ENST00000542354 TMEM14CQ9P0S9 112 aa0.74□□□□□ -2.29
TRAV1-1-201ENST00000542354 AP4S1Q9Y587 144 aa0.74□□□□□ -2.29
TRAV1-1-201ENST00000542354 C3orf85A0A1B0GTC6 90 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 C9orf170A2RU37 121 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 A8MUU9 505 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 FAM25EA8MYX2 175 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 H3BVH4 76 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 ARL6IP5O75915 188 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 NBEAP1P0C6P0 100 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 LIMS3P0CW19 117 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 LIMS4P0CW20 117 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 AKR1C4P17516 323 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 DAPP51397 102 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 TAS2R19P59542 299 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 CD164Q04900 197 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 IGFL1Q6UW32 110 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 Q6ZRG5 221 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 NRARPQ7Z6K4 114 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 SELENOHQ8IZQ5 122 aaKnown RBP0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 OR5C1Q8NGR4 320 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 DYNC2LI1Q8TCX1 351 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 CCDC124Q96CT7 223 aaKnown RBP0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 TP53RKQ96S44 253 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 FUNDC2Q9BWH2 189 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 RBKSQ9H477 322 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 FGFR1OP2Q9NVK5 253 aa0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 AK6Q9Y3D8 172 aaKnown RBP0.73□□□□□ -2.29
TRAV1-1-201ENST00000542354 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 IGKV2-29A2NJV5 120 aaPredicted RBP0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 A8MWL6 223 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 H7C2G1 150 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 RGS16O15492 202 aaPredicted RBP0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 FKBP6O75344 327 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 SCGNO76038 276 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 SCGB1D1O95968 90 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 GCGP01275 180 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 SMIM17P0DL12 118 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 SULT1A3P0DMM9 295 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 SULT1A4P0DMN0 295 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 PYYP10082 97 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 PRDX6P30041 224 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 DNLZQ5SXM8 178 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 C2orf82Q6UX34 121 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 OR1L4Q8NGR5 311 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 PFDN5Q99471 154 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 FXYD6Q9H0Q3 95 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 CDC42SE2Q9NRR3 84 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 MED9Q9NWA0 146 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 RSL24D1Q9UHA3 163 aaKnown RBP0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 V9GY05 133 aa0.72□□□□□ -2.29
TRAV1-1-201ENST00000542354 A0A087WSZ3 146 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 TRAV13-1A0A0B4J241 112 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 FABP5P3A8MUU1 101 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 B4DEV8 164 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 M0QY20 66 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 CTDSP2O14595 271 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 NCR2O95944 276 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 TCL1BO95988 128 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 PMP2P02689 132 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 OR5AL1P0C617 328 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 MYL12AP19105 171 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 CASQ1P31415 396 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 RANP62826 216 aaKnown RBP0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 BAXQ07812 192 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms