RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 KRTDAPP60985 99 aa4.61□□□□□ -1.67
CLTCL1-206ENST00000540896 SMAGPQ0VAQ4 97 aa4.61□□□□□ -1.67
CLTCL1-206ENST00000540896 AMMECR1LQ6DCA0 310 aa4.61□□□□□ -1.67
CLTCL1-206ENST00000540896 DGAT2L7PQ6IED9 249 aa4.61□□□□□ -1.67
CLTCL1-206ENST00000540896 C20orf203Q8NBC4 194 aa4.61□□□□□ -1.67
CLTCL1-206ENST00000540896 OR10D4PQ8NGN7 298 aa4.61□□□□□ -1.67
CLTCL1-206ENST00000540896 TOMM6Q96B49 74 aa4.61□□□□□ -1.67
CLTCL1-206ENST00000540896 PACRGQ96M98 296 aaPredicted RBP4.61□□□□□ -1.67
CLTCL1-206ENST00000540896 TMEM243Q9BU79 118 aa4.61□□□□□ -1.67
CLTCL1-206ENST00000540896 MAP1LC3CQ9BXW4 147 aa4.61□□□□□ -1.67
CLTCL1-206ENST00000540896 A0A096LNJ9 63 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 IFITM10A6NMD0 228 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 H0Y8G0 127 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 ATP5LO75964 103 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 PRSS1P07477 247 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 LINC00694P0DN24 101 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 RPL39P62891 51 aaKnown RBP4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 GAGE6Q13070 117 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 Q6ZN92 141 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 NTM-AS1Q6ZSK4 140 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 ERASQ7Z444 233 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 C15orf53Q8NAA6 179 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 IFI27L1Q96BM0 104 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 TMEM101Q96IK0 257 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 CHCHD7Q9BUK0 85 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 KLK5Q9Y337 293 aaPredicted RBP4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 CSMD3Q7Z407 3707 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 NACAE9PAV3 2078 aa4.6□□□□□ -1.67
CLTCL1-206ENST00000540896 TRAV8-6A0A0B4J262 113 aa4.59□□□□□ -1.67
CLTCL1-206ENST00000540896 H7C423 109 aa4.59□□□□□ -1.67
CLTCL1-206ENST00000540896 FGF6P10767 208 aa4.59□□□□□ -1.67
CLTCL1-206ENST00000540896 CCL18P55774 89 aa4.59□□□□□ -1.67
CLTCL1-206ENST00000540896 PAPPA-AS1Q5QFB9 102 aa4.59□□□□□ -1.67
CLTCL1-206ENST00000540896 LELP1Q5T871 98 aa4.59□□□□□ -1.67
CLTCL1-206ENST00000540896 CEMP1Q6PRD7 247 aaPredicted RBP4.59□□□□□ -1.67
CLTCL1-206ENST00000540896 LYPD5Q6UWN5 251 aa4.59□□□□□ -1.67
CLTCL1-206ENST00000540896 LINC00173Q6ZV60 143 aa4.59□□□□□ -1.67
CLTCL1-206ENST00000540896 OR5A1Q8NGJ0 315 aa4.59□□□□□ -1.67
CLTCL1-206ENST00000540896 MUC7Q8TAX7 377 aa4.59□□□□□ -1.67
CLTCL1-206ENST00000540896 TMEM141Q96I45 108 aa4.59□□□□□ -1.67
CLTCL1-206ENST00000540896 SPANXA1Q9NS26 97 aa4.59□□□□□ -1.67
CLTCL1-206ENST00000540896 A0A087WX48 190 aa4.58□□□□□ -1.68
CLTCL1-206ENST00000540896 LOC105371267A0A1B0GV96 52 aa4.58□□□□□ -1.68
CLTCL1-206ENST00000540896 NUPR2A6NF83 97 aa4.58□□□□□ -1.68
CLTCL1-206ENST00000540896 C3orf84H3BNL1 204 aa4.58□□□□□ -1.68
CLTCL1-206ENST00000540896 SCGB1D1O95968 90 aa4.58□□□□□ -1.68
CLTCL1-206ENST00000540896 PKIAP61925 76 aa4.58□□□□□ -1.68
CLTCL1-206ENST00000540896 ESRGQ1W209 222 aa4.58□□□□□ -1.68
CLTCL1-206ENST00000540896 ZFAND6Q6FIF0 208 aa4.58□□□□□ -1.68
CLTCL1-206ENST00000540896 VCX2Q9H322 139 aa4.58□□□□□ -1.68
CLTCL1-206ENST00000540896 C20orf202A1L168 122 aa4.57□□□□□ -1.68
CLTCL1-206ENST00000540896 IGIPA6NJ69 53 aa4.57□□□□□ -1.68
CLTCL1-206ENST00000540896 SYS1-DBNDD2H3BUS1 97 aa4.57□□□□□ -1.68
CLTCL1-206ENST00000540896 C3orf79P0CE67 100 aa4.57□□□□□ -1.68
CLTCL1-206ENST00000540896 TIRAPP58753 221 aa4.57□□□□□ -1.68
CLTCL1-206ENST00000540896 PET117Q6UWS5 81 aa4.57□□□□□ -1.68
CLTCL1-206ENST00000540896 UBE2DNLQ8IWF7 75 aa4.57□□□□□ -1.68
CLTCL1-206ENST00000540896 TIMM17AQ99595 171 aa4.57□□□□□ -1.68
CLTCL1-206ENST00000540896 OPRPNQ99935 248 aaPredicted RBP4.57□□□□□ -1.68
CLTCL1-206ENST00000540896 TIMM21Q9BVV7 248 aa4.57□□□□□ -1.68
CLTCL1-206ENST00000540896 UBE2D4Q9Y2X8 147 aa4.57□□□□□ -1.68
CLTCL1-206ENST00000540896 PYGO1Q9Y3Y4 419 aa4.57□□□□□ -1.68
CLTCL1-206ENST00000540896 TENM2Q9NT68 2774 aa4.57□□□□□ -1.68
CLTCL1-206ENST00000540896 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
CLTCL1-206ENST00000540896 NPSP0C0P6 89 aa4.56□□□□□ -1.68
CLTCL1-206ENST00000540896 ZNF25P17030 456 aaPredicted RBP4.56□□□□□ -1.68
CLTCL1-206ENST00000540896 MALP21145 153 aa4.56□□□□□ -1.68
CLTCL1-206ENST00000540896 PMVKQ15126 192 aa4.56□□□□□ -1.68
CLTCL1-206ENST00000540896 RNASE13Q5GAN3 156 aaKnown RBP4.56□□□□□ -1.68
CLTCL1-206ENST00000540896 CASC10Q5T4H9 136 aa4.56□□□□□ -1.68
CLTCL1-206ENST00000540896 TEX43Q6ZNM6 134 aa4.56□□□□□ -1.68
CLTCL1-206ENST00000540896 ZNF664Q8N3J9 261 aa4.56□□□□□ -1.68
CLTCL1-206ENST00000540896 BAALCQ8WXS3 180 aa4.56□□□□□ -1.68
CLTCL1-206ENST00000540896 C2orf88Q9BSF0 95 aa4.56□□□□□ -1.68
CLTCL1-206ENST00000540896 IGLV4-3A0A075B6K6 122 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 IGKV3OR2-268A0A0C4DH90 116 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 PRSS29PA6NIE9 313 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 IGHV3-30P01768 117 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 IGHV3-33P01772 117 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 ANGP03950 147 aaKnown RBP4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 IGHV3-30-3P0DP02 117 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 IGHV3-30-5P0DP03 117 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 TCTAP57738 103 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 RBX1P62877 108 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 MRPS36P82909 103 aaKnown RBP4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 ZC2HC1BQ5TFG8 222 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 Q6ZUT4 128 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 MRPL52Q86TS9 123 aaKnown RBP4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 Q8N976 141 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 PMCHL2Q9BQD1 86 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 CST9LQ9H4G1 147 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 CDC42SE2Q9NRR3 84 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 APLNQ9ULZ1 77 aa4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 CHTOPQ9Y3Y2 248 aaKnown RBP4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 CSDC2Q9Y534 153 aaKnown RBP4.55□□□□□ -1.68
CLTCL1-206ENST00000540896 IGLV4-60A0A075B6I1 120 aa4.54□□□□□ -1.68
CLTCL1-206ENST00000540896 TRAV12-1A0A0B4J245 112 aa4.54□□□□□ -1.68
CLTCL1-206ENST00000540896 A0A1B0GUV1 79 aa4.54□□□□□ -1.68
CLTCL1-206ENST00000540896 JOSD1Q15040 202 aaPredicted RBP4.54□□□□□ -1.68
CLTCL1-206ENST00000540896 MPV17L2Q567V2 206 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms