RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.76□□□□□ -1.01
SMAD3-204ENST00000540846 IGKV2-29A2NJV5 120 aaPredicted RBP8.76□□□□□ -1.01
SMAD3-204ENST00000540846 C11orf86A6NJI1 115 aa8.76□□□□□ -1.01
SMAD3-204ENST00000540846 NHLRC4P0CG21 123 aaPredicted RBP8.76□□□□□ -1.01
SMAD3-204ENST00000540846 NFE4Q86UQ8 179 aa8.76□□□□□ -1.01
SMAD3-204ENST00000540846 PCP2Q8IVA1 136 aa8.76□□□□□ -1.01
SMAD3-204ENST00000540846 AMELXQ99217 191 aa8.76□□□□□ -1.01
SMAD3-204ENST00000540846 PRADC1Q9BSG0 188 aa8.76□□□□□ -1.01
SMAD3-204ENST00000540846 TIMM21Q9BVV7 248 aa8.76□□□□□ -1.01
SMAD3-204ENST00000540846 GTSF1LQ9H1H1 148 aa8.75□□□□□ -1.01
SMAD3-204ENST00000540846 VCX2Q9H322 139 aa8.75□□□□□ -1.01
SMAD3-204ENST00000540846 LOC100131303A0A0U1RQF7 123 aa8.74□□□□□ -1.01
SMAD3-204ENST00000540846 SIVA1O15304 175 aa8.74□□□□□ -1.01
SMAD3-204ENST00000540846 MRPS36P82909 103 aaKnown RBP8.74□□□□□ -1.01
SMAD3-204ENST00000540846 NTM-AS1Q6ZSK4 140 aa8.74□□□□□ -1.01
SMAD3-204ENST00000540846 TGP01266 2768 aa8.74□□□□□ -1.01
SMAD3-204ENST00000540846 E9PLD3 99 aa8.73□□□□□ -1.01
SMAD3-204ENST00000540846 SPART-AS1P0CW21 52 aa8.73□□□□□ -1.01
SMAD3-204ENST00000540846 CEMP1Q6PRD7 247 aaPredicted RBP8.73□□□□□ -1.01
SMAD3-204ENST00000540846 CHAC1Q9BUX1 264 aa8.73□□□□□ -1.01
SMAD3-204ENST00000540846 C12orf74Q32Q52 190 aa8.73□□□□□ -1.01
SMAD3-204ENST00000540846 TMEM97Q5BJF2 176 aa8.73□□□□□ -1.01
SMAD3-204ENST00000540846 Q6ZUT4 128 aa8.73□□□□□ -1.01
SMAD3-204ENST00000540846 TEX48A0A1B0GUV7 120 aa8.72□□□□□ -1.01
SMAD3-204ENST00000540846 HINT1P49773 126 aaPredicted RBP8.72□□□□□ -1.01
SMAD3-204ENST00000540846 HERVK_113P61574 105 aa8.72□□□□□ -1.01
SMAD3-204ENST00000540846 BATFQ16520 125 aa8.72□□□□□ -1.01
SMAD3-204ENST00000540846 TTTY13Q9BZ97 58 aa8.72□□□□□ -1.01
SMAD3-204ENST00000540846 HIGD1BQ9P298 99 aa8.72□□□□□ -1.01
SMAD3-204ENST00000540846 CSDC2Q9Y534 153 aaKnown RBP8.72□□□□□ -1.01
SMAD3-204ENST00000540846 SMAGPQ0VAQ4 97 aa8.71□□□□□ -1.02
SMAD3-204ENST00000540846 MPV17L2Q567V2 206 aa8.71□□□□□ -1.02
SMAD3-204ENST00000540846 TMEM243Q9BU79 118 aa8.71□□□□□ -1.02
SMAD3-204ENST00000540846 PRO0255Q9UI72 69 aa8.71□□□□□ -1.02
SMAD3-204ENST00000540846 TRAV8-6A0A0B4J262 113 aa8.7□□□□□ -1.02
SMAD3-204ENST00000540846 A0A0J9YXV3 536 aa8.7□□□□□ -1.02
SMAD3-204ENST00000540846 ZNF22P17026 224 aaPredicted RBP8.7□□□□□ -1.02
SMAD3-204ENST00000540846 DAD1P61803 113 aa8.7□□□□□ -1.02
SMAD3-204ENST00000540846 COL5A1-AS1Q5SY13 56 aa8.7□□□□□ -1.02
SMAD3-204ENST00000540846 BVES-AS1Q5T3Y7 98 aa8.7□□□□□ -1.02
SMAD3-204ENST00000540846 TMEM170BQ5T4T1 132 aa8.7□□□□□ -1.02
SMAD3-204ENST00000540846 TRBV25-1A0A075B6N4 114 aa8.69□□□□□ -1.02
SMAD3-204ENST00000540846 H7C423 109 aa8.69□□□□□ -1.02
SMAD3-204ENST00000540846 HSD52Q0P140 79 aa8.69□□□□□ -1.02
SMAD3-204ENST00000540846 RNASE13Q5GAN3 156 aaKnown RBP8.69□□□□□ -1.02
SMAD3-204ENST00000540846 MAPKAPK5-AS1Q8N8E1 139 aa8.69□□□□□ -1.02
SMAD3-204ENST00000540846 GYPEP15421 78 aa8.69□□□□□ -1.02
SMAD3-204ENST00000540846 NANOS2P60321 138 aaKnown RBP8.69□□□□□ -1.02
SMAD3-204ENST00000540846 DGAT2L7PQ6IED9 249 aa8.69□□□□□ -1.02
SMAD3-204ENST00000540846 Q6ZTC4 211 aa8.69□□□□□ -1.02
SMAD3-204ENST00000540846 C11orf45Q8TAV5 145 aa8.69□□□□□ -1.02
SMAD3-204ENST00000540846 TRBV6-8A0A0A6YYG3 113 aa8.68□□□□□ -1.02
SMAD3-204ENST00000540846 MYMXA0A1B0GTQ4 84 aa8.68□□□□□ -1.02
SMAD3-204ENST00000540846 A0A1B0GV90 55 aa8.68□□□□□ -1.02
SMAD3-204ENST00000540846 TINCRA0A1B0GVN0 87 aa8.68□□□□□ -1.02
SMAD3-204ENST00000540846 TMEM223A0PJW6 202 aa8.68□□□□□ -1.02
SMAD3-204ENST00000540846 ATP5G1P05496 136 aa8.68□□□□□ -1.02
SMAD3-204ENST00000540846 UBE2D1P51668 147 aa8.68□□□□□ -1.02
SMAD3-204ENST00000540846 UBE2L6O14933 153 aa8.67□□□□□ -1.02
SMAD3-204ENST00000540846 PAX4O43316 350 aa8.67□□□□□ -1.02
SMAD3-204ENST00000540846 ZNF25P17030 456 aaPredicted RBP8.67□□□□□ -1.02
SMAD3-204ENST00000540846 OR5A1Q8NGJ0 315 aa8.67□□□□□ -1.02
SMAD3-204ENST00000540846 ATP6V0E2Q8NHE4 81 aa8.67□□□□□ -1.02
SMAD3-204ENST00000540846 FAM19A3Q7Z5A8 133 aa8.66□□□□□ -1.02
SMAD3-204ENST00000540846 VSIG2Q96IQ7 327 aa8.66□□□□□ -1.02
SMAD3-204ENST00000540846 IGLV5-45A0A087WSX0 123 aa8.65□□□□□ -1.02
SMAD3-204ENST00000540846 LEPROTO15243 131 aa8.65□□□□□ -1.02
SMAD3-204ENST00000540846 TSPEAR-AS2P59090 65 aa8.65□□□□□ -1.02
SMAD3-204ENST00000540846 AMMECR1LQ6DCA0 310 aa8.65□□□□□ -1.02
SMAD3-204ENST00000540846 CDC42SE2Q9NRR3 84 aa8.65□□□□□ -1.02
SMAD3-204ENST00000540846 ZNF815PA8K554 130 aa8.65□□□□□ -1.03
SMAD3-204ENST00000540846 J3QQQ9 107 aa8.65□□□□□ -1.03
SMAD3-204ENST00000540846 TIRAPP58753 221 aa8.65□□□□□ -1.03
SMAD3-204ENST00000540846 SEC11AP67812 179 aa8.65□□□□□ -1.03
SMAD3-204ENST00000540846 TMEM101Q96IK0 257 aa8.65□□□□□ -1.03
SMAD3-204ENST00000540846 CSMD3Q7Z407 3707 aa8.64□□□□□ -1.03
SMAD3-204ENST00000540846 PLEKHB2Q96CS7 222 aa8.64□□□□□ -1.03
SMAD3-204ENST00000540846 DNAH7Q8WXX0 4024 aa8.64□□□□□ -1.03
SMAD3-204ENST00000540846 TRAV26-1A0A087WT03 109 aa8.63□□□□□ -1.03
SMAD3-204ENST00000540846 GAGE6Q13070 117 aa8.63□□□□□ -1.03
SMAD3-204ENST00000540846 TAL2Q16559 108 aa8.63□□□□□ -1.03
SMAD3-204ENST00000540846 ORAOV1Q8WV07 137 aa8.63□□□□□ -1.03
SMAD3-204ENST00000540846 CHCHD5Q9BSY4 110 aa8.63□□□□□ -1.03
SMAD3-204ENST00000540846 GEMIN7Q9H840 131 aaKnown RBP8.63□□□□□ -1.03
SMAD3-204ENST00000540846 F5H768 121 aa8.62□□□□□ -1.03
SMAD3-204ENST00000540846 HTN3P15516 51 aa8.62□□□□□ -1.03
SMAD3-204ENST00000540846 LGALS3P17931 250 aaKnown RBP8.62□□□□□ -1.03
SMAD3-204ENST00000540846 LINC00242Q5T6M2 205 aa8.62□□□□□ -1.03
SMAD3-204ENST00000540846 DEFB131BA0A096LNP1 70 aa8.61□□□□□ -1.03
SMAD3-204ENST00000540846 A0A0J9YY99 117 aa8.61□□□□□ -1.03
SMAD3-204ENST00000540846 HERVK_113P63121 156 aa8.61□□□□□ -1.03
SMAD3-204ENST00000540846 TM2D2Q9BX73 214 aa8.61□□□□□ -1.03
SMAD3-204ENST00000540846 TRAV10A0A0B4J240 114 aa8.61□□□□□ -1.03
SMAD3-204ENST00000540846 IGHV1-58A0A0C4DH39 117 aa8.61□□□□□ -1.03
SMAD3-204ENST00000540846 H3BRM9 83 aa8.61□□□□□ -1.03
SMAD3-204ENST00000540846 IGHV3-30-3P0DP02 117 aa8.61□□□□□ -1.03
SMAD3-204ENST00000540846 SCGB1D4Q6XE38 83 aa8.61□□□□□ -1.03
SMAD3-204ENST00000540846 SH2D6Q7Z4S9 175 aa8.61□□□□□ -1.03
SMAD3-204ENST00000540846 IGLV4-60A0A075B6I1 120 aa8.6□□□□□ -1.03
SMAD3-204ENST00000540846 IGHV3-64A0A075B6Q5 118 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms