RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 LINC00474Q9P2X8 69 aa6.74□□□□□ -1.33
CDCA3-208ENST00000540683 C7orf77A4D0Y5 90 aa6.73□□□□□ -1.33
CDCA3-208ENST00000540683 ADIRFQ15847 76 aa6.73□□□□□ -1.33
CDCA3-208ENST00000540683 LINC01620Q4KN68 170 aa6.73□□□□□ -1.33
CDCA3-208ENST00000540683 KRTAP26-1Q6PEX3 210 aa6.73□□□□□ -1.33
CDCA3-208ENST00000540683 MRPL52Q86TS9 123 aaKnown RBP6.73□□□□□ -1.33
CDCA3-208ENST00000540683 RPL39LQ96EH5 51 aaKnown RBP6.73□□□□□ -1.33
CDCA3-208ENST00000540683 IGKV3OR2-268A0A0C4DH90 116 aa6.72□□□□□ -1.33
CDCA3-208ENST00000540683 GAGE12HA6NDE8 117 aa6.72□□□□□ -1.33
CDCA3-208ENST00000540683 RAB4AP20338 218 aa6.72□□□□□ -1.33
CDCA3-208ENST00000540683 RPS10P46783 165 aaKnown RBP6.72□□□□□ -1.33
CDCA3-208ENST00000540683 RPL37AP61513 92 aaKnown RBP6.72□□□□□ -1.33
CDCA3-208ENST00000540683 CHCHD10Q8WYQ3 142 aaPredicted RBP6.72□□□□□ -1.33
CDCA3-208ENST00000540683 ISOC2Q96AB3 205 aa6.72□□□□□ -1.33
CDCA3-208ENST00000540683 PLA2G2DQ9UNK4 145 aa6.72□□□□□ -1.33
CDCA3-208ENST00000540683 CSDC2Q9Y534 153 aaKnown RBP6.72□□□□□ -1.33
CDCA3-208ENST00000540683 OXTP01178 125 aa6.71□□□□□ -1.34
CDCA3-208ENST00000540683 PPBPP02775 128 aa6.71□□□□□ -1.34
CDCA3-208ENST00000540683 RAB14P61106 215 aa6.71□□□□□ -1.34
CDCA3-208ENST00000540683 SUMO2P61956 95 aaKnown RBP6.71□□□□□ -1.34
CDCA3-208ENST00000540683 NUP35Q8NFH5 326 aa6.71□□□□□ -1.34
CDCA3-208ENST00000540683 C7orf33Q8WU49 177 aa6.71□□□□□ -1.34
CDCA3-208ENST00000540683 C20orf78Q9BR46 151 aa6.71□□□□□ -1.34
CDCA3-208ENST00000540683 V9GYV3 84 aa6.71□□□□□ -1.34
CDCA3-208ENST00000540683 VPS13BQ7Z7G8 4022 aa6.71□□□□□ -1.34
CDCA3-208ENST00000540683 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.7□□□□□ -1.34
CDCA3-208ENST00000540683 IGHV1-58A0A0C4DH39 117 aa6.7□□□□□ -1.34
CDCA3-208ENST00000540683 SMIM27A0A1W2PRY6 76 aa6.7□□□□□ -1.34
CDCA3-208ENST00000540683 IGKV2-29A2NJV5 120 aaPredicted RBP6.7□□□□□ -1.34
CDCA3-208ENST00000540683 KRTAP29-1A8MX34 341 aaPredicted RBP6.7□□□□□ -1.34
CDCA3-208ENST00000540683 C1orf196B1AJZ1 125 aa6.7□□□□□ -1.34
CDCA3-208ENST00000540683 ESDP10768 282 aa6.7□□□□□ -1.34
CDCA3-208ENST00000540683 POLR2KP53803 58 aaKnown RBP6.7□□□□□ -1.34
CDCA3-208ENST00000540683 RPL23P62829 140 aaKnown RBP6.7□□□□□ -1.34
CDCA3-208ENST00000540683 SDIM1Q6ZPB5 146 aa6.7□□□□□ -1.34
CDCA3-208ENST00000540683 AMN1Q8IY45 258 aa6.7□□□□□ -1.34
CDCA3-208ENST00000540683 GVQW2A0A096LPI5 108 aaPredicted RBP6.69□□□□□ -1.34
CDCA3-208ENST00000540683 LINC00959A0A1B0GUT2 108 aa6.69□□□□□ -1.34
CDCA3-208ENST00000540683 PHOX2AO14813 284 aa6.69□□□□□ -1.34
CDCA3-208ENST00000540683 TSHBP01222 138 aa6.69□□□□□ -1.34
CDCA3-208ENST00000540683 CKS2P33552 79 aa6.69□□□□□ -1.34
CDCA3-208ENST00000540683 RPL32P62910 135 aaKnown RBP6.69□□□□□ -1.34
CDCA3-208ENST00000540683 CIRBPQ14011 172 aaKnown RBP6.69□□□□□ -1.34
CDCA3-208ENST00000540683 FAM104BQ5XKR9 115 aa6.69□□□□□ -1.34
CDCA3-208ENST00000540683 CD164L2Q6UWJ8 174 aa6.69□□□□□ -1.34
CDCA3-208ENST00000540683 ATP5L2Q7Z4Y8 100 aa6.69□□□□□ -1.34
CDCA3-208ENST00000540683 ZNF664Q8N3J9 261 aa6.69□□□□□ -1.34
CDCA3-208ENST00000540683 TMEM242Q9NWH2 141 aa6.69□□□□□ -1.34
CDCA3-208ENST00000540683 FLG2Q5D862 2391 aaPredicted RBP6.68□□□□□ -1.34
CDCA3-208ENST00000540683 TRBV24-1A0A075B6N3 115 aa6.68□□□□□ -1.34
CDCA3-208ENST00000540683 APOMO95445 188 aa6.68□□□□□ -1.34
CDCA3-208ENST00000540683 XCL1P47992 114 aa6.68□□□□□ -1.34
CDCA3-208ENST00000540683 HBBP68871 147 aa6.68□□□□□ -1.34
CDCA3-208ENST00000540683 PNRC1Q12796 327 aaPredicted RBP6.68□□□□□ -1.34
CDCA3-208ENST00000540683 TIMM21Q9BVV7 248 aa6.68□□□□□ -1.34
CDCA3-208ENST00000540683 CDC42SE2Q9NRR3 84 aa6.68□□□□□ -1.34
CDCA3-208ENST00000540683 PRSS47A8MTI9 375 aa6.67□□□□□ -1.34
CDCA3-208ENST00000540683 CAMPP49913 170 aa6.67□□□□□ -1.34
CDCA3-208ENST00000540683 FAT1Q14517 4588 aa6.66□□□□□ -1.34
CDCA3-208ENST00000540683 COX7A2LO14548 114 aa6.66□□□□□ -1.34
CDCA3-208ENST00000540683 RAB5AP20339 215 aa6.66□□□□□ -1.34
CDCA3-208ENST00000540683 FOXI1Q12951 378 aa6.66□□□□□ -1.34
CDCA3-208ENST00000540683 SERTAD4-AS1Q5TG53 156 aa6.66□□□□□ -1.34
CDCA3-208ENST00000540683 C15orf56Q8N910 161 aa6.66□□□□□ -1.34
CDCA3-208ENST00000540683 SPACA4Q8TDM5 124 aa6.66□□□□□ -1.34
CDCA3-208ENST00000540683 LAMTOR2Q9Y2Q5 125 aa6.66□□□□□ -1.34
CDCA3-208ENST00000540683 F8WDY8 70 aa6.65□□□□□ -1.34
CDCA3-208ENST00000540683 MT-ND4LP03901 98 aa6.65□□□□□ -1.34
CDCA3-208ENST00000540683 G0S2P27469 103 aa6.65□□□□□ -1.34
CDCA3-208ENST00000540683 MRPL51Q4U2R6 128 aaKnown RBP6.65□□□□□ -1.34
CDCA3-208ENST00000540683 HIGD2BQ4VC39 106 aa6.65□□□□□ -1.34
CDCA3-208ENST00000540683 CARD19Q96LW7 228 aa6.65□□□□□ -1.34
CDCA3-208ENST00000540683 SPANXA1Q9NS26 97 aa6.65□□□□□ -1.34
CDCA3-208ENST00000540683 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.65□□□□□ -1.34
CDCA3-208ENST00000540683 TNFRSF6BO95407 300 aa6.64□□□□□ -1.35
CDCA3-208ENST00000540683 COX6A2Q02221 97 aa6.64□□□□□ -1.35
CDCA3-208ENST00000540683 Q6ZRU5 148 aa6.64□□□□□ -1.35
CDCA3-208ENST00000540683 ORMDL3Q8N138 153 aa6.64□□□□□ -1.35
CDCA3-208ENST00000540683 NRACQ8N912 160 aa6.64□□□□□ -1.35
CDCA3-208ENST00000540683 PLAC8Q9NZF1 115 aa6.64□□□□□ -1.35
CDCA3-208ENST00000540683 UBE2D4Q9Y2X8 147 aa6.64□□□□□ -1.35
CDCA3-208ENST00000540683 MYCBP2O75592 4640 aa6.64□□□□□ -1.35
CDCA3-208ENST00000540683 A0A087WYN8 130 aa6.63□□□□□ -1.35
CDCA3-208ENST00000540683 A0A1B0GVG6 124 aa6.63□□□□□ -1.35
CDCA3-208ENST00000540683 SYCNQ0VAF6 134 aa6.63□□□□□ -1.35
CDCA3-208ENST00000540683 MAJINQ3KP22 176 aa6.63□□□□□ -1.35
CDCA3-208ENST00000540683 SMIM2Q9BVW6 85 aa6.63□□□□□ -1.35
CDCA3-208ENST00000540683 IGLV4-69A0A075B6H9 119 aa6.62□□□□□ -1.35
CDCA3-208ENST00000540683 D6R8Y8 96 aa6.62□□□□□ -1.35
CDCA3-208ENST00000540683 SMKR1H3BMG3 65 aa6.62□□□□□ -1.35
CDCA3-208ENST00000540683 K7EMI3 77 aa6.62□□□□□ -1.35
CDCA3-208ENST00000540683 IFI27P40305 119 aaPredicted RBP6.62□□□□□ -1.35
CDCA3-208ENST00000540683 MRPS36P82909 103 aaKnown RBP6.62□□□□□ -1.35
CDCA3-208ENST00000540683 MRPL54Q6P161 138 aaKnown RBP6.62□□□□□ -1.35
CDCA3-208ENST00000540683 OR10D4PQ8NGN7 298 aa6.62□□□□□ -1.35
CDCA3-208ENST00000540683 C2orf48Q96LS8 159 aa6.62□□□□□ -1.35
CDCA3-208ENST00000540683 DNAH8Q96JB1 4490 aa6.61□□□□□ -1.35
CDCA3-208ENST00000540683 TRAV13-1A0A0B4J241 112 aa6.61□□□□□ -1.35
CDCA3-208ENST00000540683 IGKV2-24A0A0C4DH68 120 aa6.61□□□□□ -1.35
CDCA3-208ENST00000540683 LOC107984640A0A0U1RRK4 108 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms