RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 UBE2L6O14933 153 aa11.47□□□□□ -0.57
ATP2C1-224ENST00000533801 ETDBQ3ZM63 59 aa11.47□□□□□ -0.57
ATP2C1-224ENST00000533801 K7ERU9 68 aa11.46□□□□□ -0.57
ATP2C1-224ENST00000533801 IGHV3-30-3P0DP02 117 aa11.46□□□□□ -0.57
ATP2C1-224ENST00000533801 HILS1P60008 231 aa11.46□□□□□ -0.57
ATP2C1-224ENST00000533801 RPL32P62910 135 aaKnown RBP11.46□□□□□ -0.57
ATP2C1-224ENST00000533801 CHCHD7Q9BUK0 85 aa11.46□□□□□ -0.58
ATP2C1-224ENST00000533801 TOMM7Q9P0U1 55 aa11.45□□□□□ -0.58
ATP2C1-224ENST00000533801 GAGE6Q13070 117 aa11.45□□□□□ -0.58
ATP2C1-224ENST00000533801 CDKN2A-AS1Q9UH64 79 aa11.45□□□□□ -0.58
ATP2C1-224ENST00000533801 TMEM223A0PJW6 202 aa11.45□□□□□ -0.58
ATP2C1-224ENST00000533801 A4D1N5 150 aa11.45□□□□□ -0.58
ATP2C1-224ENST00000533801 NOTCH1P46531 2555 aa11.44□□□□□ -0.58
ATP2C1-224ENST00000533801 ANK3Q12955 4377 aaKnown RBP11.44□□□□□ -0.58
ATP2C1-224ENST00000533801 NDUFA12Q9UI09 145 aa11.44□□□□□ -0.58
ATP2C1-224ENST00000533801 CRLF1O75462 422 aa11.44□□□□□ -0.58
ATP2C1-224ENST00000533801 RBX1P62877 108 aa11.44□□□□□ -0.58
ATP2C1-224ENST00000533801 MUSTN1Q8IVN3 82 aa11.44□□□□□ -0.58
ATP2C1-224ENST00000533801 TRAV25A0A0B4J276 109 aa11.44□□□□□ -0.58
ATP2C1-224ENST00000533801 HTN3P15516 51 aa11.44□□□□□ -0.58
ATP2C1-224ENST00000533801 UFSP1Q6NVU6 142 aa11.44□□□□□ -0.58
ATP2C1-224ENST00000533801 TMEM263Q8WUH6 116 aaKnown RBP11.44□□□□□ -0.58
ATP2C1-224ENST00000533801 UBE2D4Q9Y2X8 147 aa11.44□□□□□ -0.58
ATP2C1-224ENST00000533801 A0A1B0GWB2 263 aa11.43□□□□□ -0.58
ATP2C1-224ENST00000533801 K7EQD1 137 aa11.43□□□□□ -0.58
ATP2C1-224ENST00000533801 KRTAP10-3P60369 221 aa11.43□□□□□ -0.58
ATP2C1-224ENST00000533801 TEX48A0A1B0GUV7 120 aa11.43□□□□□ -0.58
ATP2C1-224ENST00000533801 CLPSL2Q6UWE3 100 aa11.43□□□□□ -0.58
ATP2C1-224ENST00000533801 OR5A1Q8NGJ0 315 aa11.43□□□□□ -0.58
ATP2C1-224ENST00000533801 CHCHD5Q9BSY4 110 aa11.43□□□□□ -0.58
ATP2C1-224ENST00000533801 C11orf68Q9H3H3 251 aaKnown RBP11.43□□□□□ -0.58
ATP2C1-224ENST00000533801 TRRAPQ9Y4A5 3859 aa11.43□□□□□ -0.58
ATP2C1-224ENST00000533801 RS1O15537 224 aa11.42□□□□□ -0.58
ATP2C1-224ENST00000533801 TAL2Q16559 108 aa11.42□□□□□ -0.58
ATP2C1-224ENST00000533801 TMEM262E9PQX1 116 aa11.42□□□□□ -0.58
ATP2C1-224ENST00000533801 LEPROTO15243 131 aa11.42□□□□□ -0.58
ATP2C1-224ENST00000533801 IGLV1-51P01701 117 aa11.41□□□□□ -0.58
ATP2C1-224ENST00000533801 C10orf126Q8N4M7 172 aa11.41□□□□□ -0.58
ATP2C1-224ENST00000533801 TSPAN13O95857 204 aa11.4□□□□□ -0.58
ATP2C1-224ENST00000533801 GIG44P09565 113 aaPredicted RBP11.4□□□□□ -0.58
ATP2C1-224ENST00000533801 COX6A2Q02221 97 aa11.4□□□□□ -0.58
ATP2C1-224ENST00000533801 PTH2Q96A98 100 aa11.4□□□□□ -0.58
ATP2C1-224ENST00000533801 DEFB135Q30KP9 77 aa11.4□□□□□ -0.58
ATP2C1-224ENST00000533801 MEIG1Q5JSS6 88 aa11.39□□□□□ -0.59
ATP2C1-224ENST00000533801 NFE4Q86UQ8 179 aa11.39□□□□□ -0.59
ATP2C1-224ENST00000533801 A0A0J9YXY3 114 aa11.39□□□□□ -0.59
ATP2C1-224ENST00000533801 CFC1BP0CG36 223 aa11.39□□□□□ -0.59
ATP2C1-224ENST00000533801 CFC1P0CG37 223 aa11.39□□□□□ -0.59
ATP2C1-224ENST00000533801 IGHV3-30P01768 117 aa11.38□□□□□ -0.59
ATP2C1-224ENST00000533801 IGHV3-30-5P0DP03 117 aa11.38□□□□□ -0.59
ATP2C1-224ENST00000533801 NDUFA11Q86Y39 141 aa11.38□□□□□ -0.59
ATP2C1-224ENST00000533801 NTM-AS1Q6ZSK4 140 aa11.38□□□□□ -0.59
ATP2C1-224ENST00000533801 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.37□□□□□ -0.59
ATP2C1-224ENST00000533801 SPANXA1Q9NS26 97 aa11.37□□□□□ -0.59
ATP2C1-224ENST00000533801 A8MTW9 85 aa11.37□□□□□ -0.59
ATP2C1-224ENST00000533801 BEAN1Q3B7T3 259 aa11.37□□□□□ -0.59
ATP2C1-224ENST00000533801 FAM104AQ969W3 186 aa11.37□□□□□ -0.59
ATP2C1-224ENST00000533801 TMEM238C9JI98 176 aa11.37□□□□□ -0.59
ATP2C1-224ENST00000533801 C1QTNF4Q9BXJ3 329 aa11.37□□□□□ -0.59
ATP2C1-224ENST00000533801 ADAMTSL4-AS1Q5T5F5 129 aa11.36□□□□□ -0.59
ATP2C1-224ENST00000533801 Q9H8V8 135 aa11.36□□□□□ -0.59
ATP2C1-224ENST00000533801 C16orf74Q96GX8 76 aa11.36□□□□□ -0.59
ATP2C1-224ENST00000533801 TMEM101Q96IK0 257 aa11.36□□□□□ -0.59
ATP2C1-224ENST00000533801 PRO1854Q9UHT4 67 aa11.36□□□□□ -0.59
ATP2C1-224ENST00000533801 TRAV4A0A0B4J268 109 aa11.35□□□□□ -0.59
ATP2C1-224ENST00000533801 IGHV1-58A0A0C4DH39 117 aa11.35□□□□□ -0.59
ATP2C1-224ENST00000533801 INSL3P51460 131 aa11.35□□□□□ -0.59
ATP2C1-224ENST00000533801 AMELXQ99217 191 aa11.35□□□□□ -0.59
ATP2C1-224ENST00000533801 TMEM243Q9BU79 118 aa11.35□□□□□ -0.59
ATP2C1-224ENST00000533801 C16orf95Q9H693 158 aa11.35□□□□□ -0.59
ATP2C1-224ENST00000533801 MRPS36P82909 103 aaKnown RBP11.34□□□□□ -0.59
ATP2C1-224ENST00000533801 DNAJC30Q96LL9 226 aa11.34□□□□□ -0.59
ATP2C1-224ENST00000533801 ERG28Q9UKR5 140 aa11.34□□□□□ -0.59
ATP2C1-224ENST00000533801 PRIMA1Q86XR5 153 aa11.34□□□□□ -0.59
ATP2C1-224ENST00000533801 PYGO1Q9Y3Y4 419 aa11.34□□□□□ -0.59
ATP2C1-224ENST00000533801 COL6A5A8TX70 2615 aa11.34□□□□□ -0.59
ATP2C1-224ENST00000533801 VSIG2Q96IQ7 327 aa11.33□□□□□ -0.6
ATP2C1-224ENST00000533801 C19orf73Q9NVV2 129 aa11.33□□□□□ -0.6
ATP2C1-224ENST00000533801 C5orf38Q86SI9 138 aa11.32□□□□□ -0.6
ATP2C1-224ENST00000533801 CIDEAO60543 219 aa11.32□□□□□ -0.6
ATP2C1-224ENST00000533801 GYPEP15421 78 aa11.32□□□□□ -0.6
ATP2C1-224ENST00000533801 UBE2D1P51668 147 aa11.32□□□□□ -0.6
ATP2C1-224ENST00000533801 EIF4EBP3O60516 100 aaPredicted RBP11.32□□□□□ -0.6
ATP2C1-224ENST00000533801 TCL1BO95988 128 aa11.32□□□□□ -0.6
ATP2C1-224ENST00000533801 TINCRA0A1B0GVN0 87 aa11.31□□□□□ -0.6
ATP2C1-224ENST00000533801 LINC00242Q5T6M2 205 aa11.31□□□□□ -0.6
ATP2C1-224ENST00000533801 UBE2D3P61077 147 aa11.31□□□□□ -0.6
ATP2C1-224ENST00000533801 UBE2D2P62837 147 aa11.31□□□□□ -0.6
ATP2C1-224ENST00000533801 C9JAW5 83 aa11.3□□□□□ -0.6
ATP2C1-224ENST00000533801 DAZ2Q13117 558 aaKnown RBP11.3□□□□□ -0.6
ATP2C1-224ENST00000533801 DAZ4Q86SG3 579 aaKnown RBP11.3□□□□□ -0.6
ATP2C1-224ENST00000533801 GTSF1LQ9H1H1 148 aa11.3□□□□□ -0.6
ATP2C1-224ENST00000533801 DAZ3Q9NR90 486 aaKnown RBP11.3□□□□□ -0.6
ATP2C1-224ENST00000533801 NBEAL1Q6ZS30 2694 aa11.3□□□□□ -0.6
ATP2C1-224ENST00000533801 CMC4P56277 68 aaPredicted RBP11.3□□□□□ -0.6
ATP2C1-224ENST00000533801 PLAC8L1A1L4L8 177 aa11.29□□□□□ -0.6
ATP2C1-224ENST00000533801 IGLV4-60A0A075B6I1 120 aa11.29□□□□□ -0.6
ATP2C1-224ENST00000533801 FAM222AQ5U5X8 452 aa11.29□□□□□ -0.6
ATP2C1-224ENST00000533801 IGLV10-54A0A075B6I4 117 aa11.28□□□□□ -0.6
ATP2C1-224ENST00000533801 XCL1P47992 114 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms