RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 NTM-AS1Q6ZSK4 140 aa5.44□□□□□ -1.54
CTNND1-229ENST00000531014 C5orf56Q8N8D9 126 aa5.44□□□□□ -1.54
CTNND1-229ENST00000531014 DCANP1Q8TF63 244 aa5.44□□□□□ -1.54
CTNND1-229ENST00000531014 AJUBAQ96IF1 538 aa5.44□□□□□ -1.54
CTNND1-229ENST00000531014 I3L2K1 104 aa5.44□□□□□ -1.54
CTNND1-229ENST00000531014 M0R378 163 aa5.44□□□□□ -1.54
CTNND1-229ENST00000531014 SLURP1P55000 103 aa5.44□□□□□ -1.54
CTNND1-229ENST00000531014 PRAC2D3DTV9 90 aa5.44□□□□□ -1.54
CTNND1-229ENST00000531014 NHLRC4P0CG21 123 aaPredicted RBP5.44□□□□□ -1.54
CTNND1-229ENST00000531014 PATE2Q6UY27 113 aa5.44□□□□□ -1.54
CTNND1-229ENST00000531014 HEATR5AQ86XA9 2040 aa5.44□□□□□ -1.54
CTNND1-229ENST00000531014 IGHV7-81A0A0B4J1V7 117 aa5.44□□□□□ -1.54
CTNND1-229ENST00000531014 DEFB136Q30KP8 78 aa5.44□□□□□ -1.54
CTNND1-229ENST00000531014 LINC00322Q6ZN03 302 aaPredicted RBP5.43□□□□□ -1.54
CTNND1-229ENST00000531014 NOTCH4Q99466 2003 aa5.43□□□□□ -1.54
CTNND1-229ENST00000531014 K7EIM0 57 aa5.43□□□□□ -1.54
CTNND1-229ENST00000531014 K7EMT4 169 aa5.43□□□□□ -1.54
CTNND1-229ENST00000531014 A0A087WVE0 104 aa5.43□□□□□ -1.54
CTNND1-229ENST00000531014 SYCNQ0VAF6 134 aa5.43□□□□□ -1.54
CTNND1-229ENST00000531014 ZGRF1Q86YA3 2104 aa5.43□□□□□ -1.54
CTNND1-229ENST00000531014 IGLV11-55A0A075B6I3 123 aa5.43□□□□□ -1.54
CTNND1-229ENST00000531014 A0A1B0GU69 56 aa5.43□□□□□ -1.54
CTNND1-229ENST00000531014 C19orf71A6NCJ1 209 aa5.43□□□□□ -1.54
CTNND1-229ENST00000531014 MAPKAPK5-AS1Q8N8E1 139 aa5.43□□□□□ -1.54
CTNND1-229ENST00000531014 FAM167A-AS1Q96KT0 104 aa5.43□□□□□ -1.54
CTNND1-229ENST00000531014 ANAPC1Q9H1A4 1944 aa5.42□□□□□ -1.54
CTNND1-229ENST00000531014 LINC01547P58512 204 aaPredicted RBP5.42□□□□□ -1.54
CTNND1-229ENST00000531014 Q8N3U1 123 aa5.42□□□□□ -1.54
CTNND1-229ENST00000531014 H0Y9P7 68 aa5.42□□□□□ -1.54
CTNND1-229ENST00000531014 ZFP36P26651 326 aaKnown RBP5.42□□□□□ -1.54
CTNND1-229ENST00000531014 COL4A3Q01955 1670 aa5.42□□□□□ -1.54
CTNND1-229ENST00000531014 FREM3P0C091 2139 aa5.42□□□□□ -1.54
CTNND1-229ENST00000531014 DEFB135Q30KP9 77 aa5.42□□□□□ -1.54
CTNND1-229ENST00000531014 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.42□□□□□ -1.54
CTNND1-229ENST00000531014 IGLV4-3A0A075B6K6 122 aa5.42□□□□□ -1.54
CTNND1-229ENST00000531014 IGKV2-28A0A075B6P5 120 aa5.41□□□□□ -1.54
CTNND1-229ENST00000531014 TRBV10-3A0A0K0K1G6 114 aa5.41□□□□□ -1.54
CTNND1-229ENST00000531014 IGKV2D-28P01615 120 aa5.41□□□□□ -1.54
CTNND1-229ENST00000531014 ZNF295-AS1Q8N0V1 137 aa5.41□□□□□ -1.54
CTNND1-229ENST00000531014 PCDH15Q96QU1 1955 aa5.41□□□□□ -1.54
CTNND1-229ENST00000531014 FRMD6-AS1P0C7T7 363 aa5.41□□□□□ -1.54
CTNND1-229ENST00000531014 SMIM11BQ8TCY0 68 aa5.41□□□□□ -1.54
CTNND1-229ENST00000531014 LINC00467Q9BRT7 94 aa5.41□□□□□ -1.54
CTNND1-229ENST00000531014 PLAC8L1A1L4L8 177 aa5.41□□□□□ -1.54
CTNND1-229ENST00000531014 PKD1L2Q7Z442 2459 aa5.41□□□□□ -1.54
CTNND1-229ENST00000531014 A6NDX4 124 aa5.41□□□□□ -1.54
CTNND1-229ENST00000531014 DEFB4AO15263 64 aa5.4□□□□□ -1.54
CTNND1-229ENST00000531014 IGLV1-44P01699 117 aa5.4□□□□□ -1.54
CTNND1-229ENST00000531014 C10orf25Q5T742 122 aa5.4□□□□□ -1.54
CTNND1-229ENST00000531014 RETNLBQ9BQ08 111 aa5.4□□□□□ -1.54
CTNND1-229ENST00000531014 ROS1P08922 2347 aa5.4□□□□□ -1.54
CTNND1-229ENST00000531014 IGLV9-49A0A0B4J1Y8 123 aa5.4□□□□□ -1.55
CTNND1-229ENST00000531014 TNFRSF13BO14836 293 aaPredicted RBP5.4□□□□□ -1.55
CTNND1-229ENST00000531014 TNCP24821 2201 aa5.39□□□□□ -1.55
CTNND1-229ENST00000531014 A0A0J9YX75 114 aa5.39□□□□□ -1.55
CTNND1-229ENST00000531014 ATP11AUNQ6ZP68 121 aa5.39□□□□□ -1.55
CTNND1-229ENST00000531014 FER1L5A0AVI2 2057 aa5.39□□□□□ -1.55
CTNND1-229ENST00000531014 PTPRDP23468 1912 aa5.39□□□□□ -1.55
CTNND1-229ENST00000531014 MUC7Q8TAX7 377 aa5.39□□□□□ -1.55
CTNND1-229ENST00000531014 TNRC6BQ9UPQ9 1833 aaKnown RBP5.39□□□□□ -1.55
CTNND1-229ENST00000531014 PRM2P04554 102 aa5.39□□□□□ -1.55
CTNND1-229ENST00000531014 DYSFO75923 2080 aa5.38□□□□□ -1.55
CTNND1-229ENST00000531014 IGHV6-1A0A0B4J1U7 121 aa5.38□□□□□ -1.55
CTNND1-229ENST00000531014 C1orf137Q5JT78 98 aa5.38□□□□□ -1.55
CTNND1-229ENST00000531014 GTF3C1Q12789 2109 aa5.38□□□□□ -1.55
CTNND1-229ENST00000531014 PLXNA2O75051 1894 aa5.38□□□□□ -1.55
CTNND1-229ENST00000531014 CCDC140Q96MF4 163 aa5.38□□□□□ -1.55
CTNND1-229ENST00000531014 TMEM131Q92545 1883 aa5.38□□□□□ -1.55
CTNND1-229ENST00000531014 KIAA1549LQ6ZVL6 1849 aa5.38□□□□□ -1.55
CTNND1-229ENST00000531014 PLXND1Q9Y4D7 1925 aa5.38□□□□□ -1.55
CTNND1-229ENST00000531014 C11orf45Q8TAV5 145 aa5.38□□□□□ -1.55
CTNND1-229ENST00000531014 KRTAP21-3Q3LHN1 58 aa5.37□□□□□ -1.55
CTNND1-229ENST00000531014 MYLKQ15746 1914 aa5.37□□□□□ -1.55
CTNND1-229ENST00000531014 TRAV10A0A0B4J240 114 aa5.37□□□□□ -1.55
CTNND1-229ENST00000531014 LOC100131303A0A0U1RQF7 123 aa5.37□□□□□ -1.55
CTNND1-229ENST00000531014 C10orf142B7Z368 130 aa5.37□□□□□ -1.55
CTNND1-229ENST00000531014 RPS28P62857 69 aaKnown RBP5.37□□□□□ -1.55
CTNND1-229ENST00000531014 EIF4EBP1Q13541 118 aaPredicted RBP5.37□□□□□ -1.55
CTNND1-229ENST00000531014 PROK2Q9HC23 129 aa5.37□□□□□ -1.55
CTNND1-229ENST00000531014 OBSL1O75147 1896 aa5.37□□□□□ -1.55
CTNND1-229ENST00000531014 CEP192Q8TEP8 1941 aa5.37□□□□□ -1.55
CTNND1-229ENST00000531014 TMEM89A2RUT3 159 aa5.37□□□□□ -1.55
CTNND1-229ENST00000531014 PRLHP81277 87 aa5.37□□□□□ -1.55
CTNND1-229ENST00000531014 PLA2G2EQ9NZK7 142 aa5.37□□□□□ -1.55
CTNND1-229ENST00000531014 RPL28P46779 137 aaKnown RBP5.37□□□□□ -1.55
CTNND1-229ENST00000531014 C2orf91Q6ZV80 131 aa5.37□□□□□ -1.55
CTNND1-229ENST00000531014 IGLV4-69A0A075B6H9 119 aa5.36□□□□□ -1.55
CTNND1-229ENST00000531014 COX17Q14061 63 aa5.36□□□□□ -1.55
CTNND1-229ENST00000531014 Q6ZTI0 123 aa5.36□□□□□ -1.55
CTNND1-229ENST00000531014 C11orf53Q8IXP5 236 aa5.36□□□□□ -1.55
CTNND1-229ENST00000531014 ODF3Q96PU9 254 aa5.36□□□□□ -1.55
CTNND1-229ENST00000531014 C4orf26Q17RF5 130 aa5.36□□□□□ -1.55
CTNND1-229ENST00000531014 MDFIQ99750 246 aa5.36□□□□□ -1.55
CTNND1-229ENST00000531014 ZNF702PQ9H963 129 aa5.36□□□□□ -1.55
CTNND1-229ENST00000531014 TRBV6-8A0A0A6YYG3 113 aa5.36□□□□□ -1.55
CTNND1-229ENST00000531014 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.36□□□□□ -1.55
CTNND1-229ENST00000531014 KRTAP10-9P60411 292 aa5.36□□□□□ -1.55
CTNND1-229ENST00000531014 CD164L2Q6UWJ8 174 aa5.36□□□□□ -1.55
CTNND1-229ENST00000531014 CTSZQ9UBR2 303 aa5.35□□□□□ -1.55
CTNND1-229ENST00000531014 GDF5OSQ5U4N7 250 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms