RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 IGLV4-60A0A075B6I1 120 aa12.37□□□□□ -0.43
GMDS-208ENST00000530927 SDHAF1A6NFY7 115 aa12.37□□□□□ -0.43
GMDS-208ENST00000530927 AMTP48728 403 aa12.37□□□□□ -0.43
GMDS-208ENST00000530927 COTL1Q14019 142 aa12.37□□□□□ -0.43
GMDS-208ENST00000530927 LINC00269Q8N2A0 174 aa12.37□□□□□ -0.43
GMDS-208ENST00000530927 TNFRSF6BO95407 300 aa12.36□□□□□ -0.43
GMDS-208ENST00000530927 CRPP02741 224 aa12.36□□□□□ -0.43
GMDS-208ENST00000530927 KIAA1644Q3SXP7 199 aa12.36□□□□□ -0.43
GMDS-208ENST00000530927 C20orf203Q8NBC4 194 aa12.36□□□□□ -0.43
GMDS-208ENST00000530927 C20orf78Q9BR46 151 aa12.36□□□□□ -0.43
GMDS-208ENST00000530927 IGLV5-52A0A0A0MRZ9 124 aa12.35□□□□□ -0.43
GMDS-208ENST00000530927 HIST1H2BLQ99880 126 aa12.35□□□□□ -0.43
GMDS-208ENST00000530927 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.34□□□□□ -0.43
GMDS-208ENST00000530927 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.34□□□□□ -0.43
GMDS-208ENST00000530927 IGKV2-29A2NJV5 120 aaPredicted RBP12.34□□□□□ -0.43
GMDS-208ENST00000530927 CDK2AP2O75956 126 aa12.34□□□□□ -0.43
GMDS-208ENST00000530927 NPYP01303 97 aa12.34□□□□□ -0.43
GMDS-208ENST00000530927 SUMO2P61956 95 aaKnown RBP12.34□□□□□ -0.43
GMDS-208ENST00000530927 CDPF1Q6NVV7 123 aa12.34□□□□□ -0.43
GMDS-208ENST00000530927 OR10D4PQ8NGN7 298 aa12.34□□□□□ -0.43
GMDS-208ENST00000530927 RMI2Q96E14 147 aa12.34□□□□□ -0.43
GMDS-208ENST00000530927 KRTAP4-5Q9BYR2 181 aa12.34□□□□□ -0.43
GMDS-208ENST00000530927 PCP4L1A6NKN8 68 aa12.33□□□□□ -0.44
GMDS-208ENST00000530927 Q0VG73 95 aa12.33□□□□□ -0.44
GMDS-208ENST00000530927 PYY3Q5JQD4 70 aa12.33□□□□□ -0.44
GMDS-208ENST00000530927 TMEM18Q96B42 140 aa12.33□□□□□ -0.44
GMDS-208ENST00000530927 PACRGQ96M98 296 aaPredicted RBP12.33□□□□□ -0.44
GMDS-208ENST00000530927 ALKBH7Q9BT30 221 aaPredicted RBP12.33□□□□□ -0.44
GMDS-208ENST00000530927 TMEM70Q9BUB7 260 aa12.33□□□□□ -0.44
GMDS-208ENST00000530927 C1orf43Q9BWL3 253 aa12.33□□□□□ -0.44
GMDS-208ENST00000530927 PRR34Q9NV39 138 aa12.33□□□□□ -0.44
GMDS-208ENST00000530927 VCYO14598 125 aa12.32□□□□□ -0.44
GMDS-208ENST00000530927 POLR2KP53803 58 aaKnown RBP12.32□□□□□ -0.44
GMDS-208ENST00000530927 PKIAP61925 76 aa12.32□□□□□ -0.44
GMDS-208ENST00000530927 IGLV10-54A0A075B6I4 117 aa12.31□□□□□ -0.44
GMDS-208ENST00000530927 TRBV27A0A0K0K1C4 114 aa12.31□□□□□ -0.44
GMDS-208ENST00000530927 PRSS47A8MTI9 375 aa12.31□□□□□ -0.44
GMDS-208ENST00000530927 I3L3M4 83 aa12.31□□□□□ -0.44
GMDS-208ENST00000530927 UBE2L6O14933 153 aa12.31□□□□□ -0.44
GMDS-208ENST00000530927 TSHBP01222 138 aa12.31□□□□□ -0.44
GMDS-208ENST00000530927 ESDP10768 282 aa12.31□□□□□ -0.44
GMDS-208ENST00000530927 FABP4P15090 132 aa12.31□□□□□ -0.44
GMDS-208ENST00000530927 GCSHP23434 173 aa12.31□□□□□ -0.44
GMDS-208ENST00000530927 RPL32P62910 135 aaKnown RBP12.31□□□□□ -0.44
GMDS-208ENST00000530927 HAMPP81172 84 aa12.31□□□□□ -0.44
GMDS-208ENST00000530927 MAP1LC3AQ9H492 121 aa12.31□□□□□ -0.44
GMDS-208ENST00000530927 COX11Q9Y6N1 276 aa12.31□□□□□ -0.44
GMDS-208ENST00000530927 DNAH8Q96JB1 4490 aa12.31□□□□□ -0.44
GMDS-208ENST00000530927 PMCHP20382 165 aa12.3□□□□□ -0.44
GMDS-208ENST00000530927 JOSD1Q15040 202 aaPredicted RBP12.3□□□□□ -0.44
GMDS-208ENST00000530927 LINC01620Q4KN68 170 aa12.3□□□□□ -0.44
GMDS-208ENST00000530927 KRTAP26-1Q6PEX3 210 aa12.3□□□□□ -0.44
GMDS-208ENST00000530927 REG3AQ06141 175 aa12.29□□□□□ -0.44
GMDS-208ENST00000530927 SMIM2Q9BVW6 85 aa12.29□□□□□ -0.44
GMDS-208ENST00000530927 A0A1B0GUV1 79 aa12.28□□□□□ -0.44
GMDS-208ENST00000530927 XGP55808 180 aa12.28□□□□□ -0.44
GMDS-208ENST00000530927 MIAQ16674 131 aa12.28□□□□□ -0.44
GMDS-208ENST00000530927 NTN5Q8WTR8 489 aaPredicted RBP12.28□□□□□ -0.44
GMDS-208ENST00000530927 LOC389332A0A1B0GUA5 103 aa12.28□□□□□ -0.44
GMDS-208ENST00000530927 KIR2DL4Q99706 377 aa12.28□□□□□ -0.44
GMDS-208ENST00000530927 IGKV3OR2-268A0A0C4DH90 116 aa12.27□□□□□ -0.45
GMDS-208ENST00000530927 TCAPO15273 167 aa12.26□□□□□ -0.45
GMDS-208ENST00000530927 CTAG1AP78358 180 aa12.26□□□□□ -0.45
GMDS-208ENST00000530927 PDZD11Q5EBL8 140 aa12.26□□□□□ -0.45
GMDS-208ENST00000530927 RNASEKQ6P5S7 137 aaKnown RBP12.26□□□□□ -0.45
GMDS-208ENST00000530927 Q8N8P6 123 aa12.26□□□□□ -0.45
GMDS-208ENST00000530927 NXT2Q9NPJ8 142 aaKnown RBP12.26□□□□□ -0.45
GMDS-208ENST00000530927 FAM30AQ9NZY2 134 aa12.26□□□□□ -0.45
GMDS-208ENST00000530927 FGF6P10767 208 aa12.25□□□□□ -0.45
GMDS-208ENST00000530927 FAT1Q14517 4588 aa12.25□□□□□ -0.45
GMDS-208ENST00000530927 USP17L23D6RBM5 183 aa12.24□□□□□ -0.45
GMDS-208ENST00000530927 FCER1GP30273 86 aa12.24□□□□□ -0.45
GMDS-208ENST00000530927 AMMECR1LQ6DCA0 310 aa12.24□□□□□ -0.45
GMDS-208ENST00000530927 PRSS3P2Q8NHM4 247 aa12.24□□□□□ -0.45
GMDS-208ENST00000530927 C18orf32Q8TCD1 76 aa12.24□□□□□ -0.45
GMDS-208ENST00000530927 K7EMI3 77 aa12.23□□□□□ -0.45
GMDS-208ENST00000530927 IFI27P40305 119 aaPredicted RBP12.23□□□□□ -0.45
GMDS-208ENST00000530927 ABCA13Q86UQ4 5058 aa12.22□□□□□ -0.45
GMDS-208ENST00000530927 PCLOQ9Y6V0 5065 aa12.22□□□□□ -0.45
GMDS-208ENST00000530927 PRSS1P07477 247 aa12.21□□□□□ -0.45
GMDS-208ENST00000530927 TSTD3H0UI37 97 aa12.2□□□□□ -0.46
GMDS-208ENST00000530927 H7C423 109 aa12.2□□□□□ -0.46
GMDS-208ENST00000530927 FA2HQ7L5A8 372 aa12.2□□□□□ -0.46
GMDS-208ENST00000530927 TRAV8-4A0A0B4J246 113 aa12.19□□□□□ -0.46
GMDS-208ENST00000530927 GAGE12HA6NDE8 117 aa12.19□□□□□ -0.46
GMDS-208ENST00000530927 LINC01546A6NGU7 62 aa12.19□□□□□ -0.46
GMDS-208ENST00000530927 ORMDL2Q53FV1 153 aa12.19□□□□□ -0.46
GMDS-208ENST00000530927 Q8N1X5 172 aa12.19□□□□□ -0.46
GMDS-208ENST00000530927 LINC00587B1AMM8 73 aa12.18□□□□□ -0.46
GMDS-208ENST00000530927 SMR3BP02814 79 aaPredicted RBP12.18□□□□□ -0.46
GMDS-208ENST00000530927 LINC00614P0C842 121 aa12.18□□□□□ -0.46
GMDS-208ENST00000530927 BAGE3Q86Y29 109 aa12.18□□□□□ -0.46
GMDS-208ENST00000530927 RNASE13Q5GAN3 156 aaKnown RBP12.17□□□□□ -0.46
GMDS-208ENST00000530927 AP5S1Q9NUS5 200 aa12.17□□□□□ -0.46
GMDS-208ENST00000530927 ZNF25P17030 456 aaPredicted RBP12.16□□□□□ -0.46
GMDS-208ENST00000530927 G0S2P27469 103 aa12.16□□□□□ -0.46
GMDS-208ENST00000530927 OR5A1Q8NGJ0 315 aa12.16□□□□□ -0.46
GMDS-208ENST00000530927 CHCHD10Q8WYQ3 142 aaPredicted RBP12.16□□□□□ -0.46
GMDS-208ENST00000530927 TMEM101Q96IK0 257 aa12.16□□□□□ -0.46
GMDS-208ENST00000530927 SERF1AO75920 110 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms