RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 TMEM101Q96IK0 257 aa6.86□□□□□ -1.31
AMBRA1-207ENST00000529553 BTF3L4Q96K17 158 aa6.86□□□□□ -1.31
AMBRA1-207ENST00000529553 CAMK2N2Q96S95 79 aa6.86□□□□□ -1.31
AMBRA1-207ENST00000529553 MAP1LC3BQ9GZQ8 125 aa6.86□□□□□ -1.31
AMBRA1-207ENST00000529553 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.85□□□□□ -1.31
AMBRA1-207ENST00000529553 IGKV2-29A2NJV5 120 aaPredicted RBP6.85□□□□□ -1.31
AMBRA1-207ENST00000529553 F2Z2F3 143 aa6.85□□□□□ -1.31
AMBRA1-207ENST00000529553 TRGC1P0CF51 173 aa6.85□□□□□ -1.31
AMBRA1-207ENST00000529553 IGLC6P0CF74 106 aa6.85□□□□□ -1.31
AMBRA1-207ENST00000529553 ESDP10768 282 aa6.85□□□□□ -1.31
AMBRA1-207ENST00000529553 RPP21Q9H633 154 aaKnown RBP6.85□□□□□ -1.31
AMBRA1-207ENST00000529553 MALP21145 153 aa6.84□□□□□ -1.31
AMBRA1-207ENST00000529553 CCL20P78556 96 aa6.84□□□□□ -1.31
AMBRA1-207ENST00000529553 CST9LP1Q5W188 147 aa6.84□□□□□ -1.31
AMBRA1-207ENST00000529553 ALKAL2Q6UX46 152 aa6.84□□□□□ -1.31
AMBRA1-207ENST00000529553 C19orf71A6NCJ1 209 aa6.83□□□□□ -1.32
AMBRA1-207ENST00000529553 APCSP02743 223 aa6.83□□□□□ -1.32
AMBRA1-207ENST00000529553 H2AFB1P0C5Y9 115 aa6.83□□□□□ -1.32
AMBRA1-207ENST00000529553 RPS20P60866 119 aaKnown RBP6.83□□□□□ -1.32
AMBRA1-207ENST00000529553 OR2D3Q8NGH3 330 aa6.83□□□□□ -1.32
AMBRA1-207ENST00000529553 SFT2D1Q8WV19 159 aa6.83□□□□□ -1.32
AMBRA1-207ENST00000529553 FAM210AQ96ND0 272 aa6.83□□□□□ -1.32
AMBRA1-207ENST00000529553 TPPP3Q9BW30 176 aa6.83□□□□□ -1.32
AMBRA1-207ENST00000529553 A0A1B0GV50 99 aa6.82□□□□□ -1.32
AMBRA1-207ENST00000529553 F8WDY8 70 aa6.82□□□□□ -1.32
AMBRA1-207ENST00000529553 COX7A2LO14548 114 aa6.82□□□□□ -1.32
AMBRA1-207ENST00000529553 ZNF861PO60384 105 aa6.82□□□□□ -1.32
AMBRA1-207ENST00000529553 IMMP2LQ96T52 175 aa6.82□□□□□ -1.32
AMBRA1-207ENST00000529553 CDC42SE2Q9NRR3 84 aa6.82□□□□□ -1.32
AMBRA1-207ENST00000529553 C1orf196B1AJZ1 125 aa6.81□□□□□ -1.32
AMBRA1-207ENST00000529553 GATD1Q8NB37 220 aa6.81□□□□□ -1.32
AMBRA1-207ENST00000529553 OPRPNQ99935 248 aaPredicted RBP6.81□□□□□ -1.32
AMBRA1-207ENST00000529553 PAGE4O60829 102 aa6.8□□□□□ -1.32
AMBRA1-207ENST00000529553 CTAG1AP78358 180 aa6.8□□□□□ -1.32
AMBRA1-207ENST00000529553 MRPL52Q86TS9 123 aaKnown RBP6.8□□□□□ -1.32
AMBRA1-207ENST00000529553 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
AMBRA1-207ENST00000529553 MRPL35Q9NZE8 188 aaKnown RBP6.8□□□□□ -1.32
AMBRA1-207ENST00000529553 FAM168BA1KXE4 195 aa6.79□□□□□ -1.32
AMBRA1-207ENST00000529553 XKRY2A2RUG3 117 aa6.79□□□□□ -1.32
AMBRA1-207ENST00000529553 TLX1NBP0CAT3 122 aa6.79□□□□□ -1.32
AMBRA1-207ENST00000529553 CRYGAP11844 174 aa6.79□□□□□ -1.32
AMBRA1-207ENST00000529553 UBE2BP63146 152 aa6.79□□□□□ -1.32
AMBRA1-207ENST00000529553 SRSF3P84103 164 aaKnown RBP6.79□□□□□ -1.32
AMBRA1-207ENST00000529553 TEX261Q6UWH6 196 aa6.79□□□□□ -1.32
AMBRA1-207ENST00000529553 IGLV7-46A0A075B6I9 117 aa6.78□□□□□ -1.32
AMBRA1-207ENST00000529553 I3L3M4 83 aa6.78□□□□□ -1.32
AMBRA1-207ENST00000529553 TMEM241Q24JQ0 296 aa6.78□□□□□ -1.32
AMBRA1-207ENST00000529553 LYZL1Q6UWQ5 148 aa6.78□□□□□ -1.32
AMBRA1-207ENST00000529553 A0A087X002 238 aa6.77□□□□□ -1.33
AMBRA1-207ENST00000529553 SCO2A0A1W2PP80 73 aa6.77□□□□□ -1.33
AMBRA1-207ENST00000529553 SDHAF1A6NFY7 115 aa6.77□□□□□ -1.33
AMBRA1-207ENST00000529553 PMCHP20382 165 aa6.77□□□□□ -1.33
AMBRA1-207ENST00000529553 BLOC1S1P78537 153 aa6.77□□□□□ -1.33
AMBRA1-207ENST00000529553 IFITM2Q01629 132 aa6.77□□□□□ -1.33
AMBRA1-207ENST00000529553 FAM19A5Q7Z5A7 132 aaPredicted RBP6.77□□□□□ -1.33
AMBRA1-207ENST00000529553 OR10D4PQ8NGN7 298 aa6.77□□□□□ -1.33
AMBRA1-207ENST00000529553 MANBALQ9NQG1 85 aa6.77□□□□□ -1.33
AMBRA1-207ENST00000529553 GNG13Q9P2W3 67 aa6.77□□□□□ -1.33
AMBRA1-207ENST00000529553 M0QXV9 152 aa6.76□□□□□ -1.33
AMBRA1-207ENST00000529553 KRTAP7-1Q8IUC3 87 aa6.76□□□□□ -1.33
AMBRA1-207ENST00000529553 C11orf52Q96A22 123 aa6.76□□□□□ -1.33
AMBRA1-207ENST00000529553 RPL39LQ96EH5 51 aaKnown RBP6.76□□□□□ -1.33
AMBRA1-207ENST00000529553 MRAP2Q96G30 205 aa6.76□□□□□ -1.33
AMBRA1-207ENST00000529553 RETNLBQ9BQ08 111 aa6.76□□□□□ -1.33
AMBRA1-207ENST00000529553 TRBV6-5A0A0K0K1A5 114 aa6.75□□□□□ -1.33
AMBRA1-207ENST00000529553 NUPR1O60356 82 aa6.75□□□□□ -1.33
AMBRA1-207ENST00000529553 IFNA1P01562 189 aa6.75□□□□□ -1.33
AMBRA1-207ENST00000529553 SPAG11BQ08648 103 aa6.75□□□□□ -1.33
AMBRA1-207ENST00000529553 TWIST1Q15672 202 aa6.75□□□□□ -1.33
AMBRA1-207ENST00000529553 CNFNQ9BYD5 112 aa6.75□□□□□ -1.33
AMBRA1-207ENST00000529553 TEX46H3BTG2 121 aa6.74□□□□□ -1.33
AMBRA1-207ENST00000529553 RPL35P42766 123 aaKnown RBP6.74□□□□□ -1.33
AMBRA1-207ENST00000529553 LINC00173Q6ZV60 143 aa6.74□□□□□ -1.33
AMBRA1-207ENST00000529553 C5orf38Q86SI9 138 aa6.74□□□□□ -1.33
AMBRA1-207ENST00000529553 CSDC2Q9Y534 153 aaKnown RBP6.74□□□□□ -1.33
AMBRA1-207ENST00000529553 NDUFA1O15239 70 aa6.73□□□□□ -1.33
AMBRA1-207ENST00000529553 TSHBP01222 138 aa6.73□□□□□ -1.33
AMBRA1-207ENST00000529553 ASB16-AS1Q495Z4 193 aa6.73□□□□□ -1.33
AMBRA1-207ENST00000529553 SMIM12Q96EX1 92 aa6.73□□□□□ -1.33
AMBRA1-207ENST00000529553 SMDT1Q9H4I9 107 aa6.73□□□□□ -1.33
AMBRA1-207ENST00000529553 CTRLP40313 264 aa6.72□□□□□ -1.33
AMBRA1-207ENST00000529553 SMAGPQ0VAQ4 97 aa6.72□□□□□ -1.33
AMBRA1-207ENST00000529553 GAGE2EQ4V326 116 aa6.72□□□□□ -1.33
AMBRA1-207ENST00000529553 SMIM15Q7Z3B0 74 aa6.72□□□□□ -1.33
AMBRA1-207ENST00000529553 GAGE2DQ9UEU5 116 aa6.72□□□□□ -1.33
AMBRA1-207ENST00000529553 TRBV20OR9-2A0A075B6H5 130 aa6.71□□□□□ -1.34
AMBRA1-207ENST00000529553 RAB19A4D1S5 217 aa6.71□□□□□ -1.34
AMBRA1-207ENST00000529553 PDE6DO43924 150 aa6.71□□□□□ -1.34
AMBRA1-207ENST00000529553 TAGLN2P37802 199 aaKnown RBP6.71□□□□□ -1.34
AMBRA1-207ENST00000529553 RPL28P46779 137 aaKnown RBP6.71□□□□□ -1.34
AMBRA1-207ENST00000529553 LINC00304Q8N9R0 145 aa6.71□□□□□ -1.34
AMBRA1-207ENST00000529553 PPDPFQ9H3Y8 114 aa6.71□□□□□ -1.34
AMBRA1-207ENST00000529553 BIN3Q9NQY0 253 aa6.71□□□□□ -1.34
AMBRA1-207ENST00000529553 TRAV13-1A0A0B4J241 112 aa6.7□□□□□ -1.34
AMBRA1-207ENST00000529553 C7orf77A4D0Y5 90 aa6.7□□□□□ -1.34
AMBRA1-207ENST00000529553 C9JQL5 133 aa6.7□□□□□ -1.34
AMBRA1-207ENST00000529553 SRP19P09132 144 aaKnown RBP6.7□□□□□ -1.34
AMBRA1-207ENST00000529553 C10orf25Q5T742 122 aa6.7□□□□□ -1.34
AMBRA1-207ENST00000529553 UNQ6190/PRO20217Q6UXQ8 127 aa6.7□□□□□ -1.34
AMBRA1-207ENST00000529553 ST20Q9HBF5 79 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms