RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 APOMO95445 188 aa9.65□□□□□ -0.86
CHMP4A-203ENST00000527154 BCL2P10415 239 aa9.65□□□□□ -0.86
CHMP4A-203ENST00000527154 ISOC2Q96AB3 205 aa9.65□□□□□ -0.86
CHMP4A-203ENST00000527154 CARHSP1Q9Y2V2 147 aaKnown RBP9.65□□□□□ -0.86
CHMP4A-203ENST00000527154 IGLV4-69A0A075B6H9 119 aa9.64□□□□□ -0.87
CHMP4A-203ENST00000527154 CCL20P78556 96 aa9.64□□□□□ -0.87
CHMP4A-203ENST00000527154 AMMECR1LQ6DCA0 310 aa9.64□□□□□ -0.87
CHMP4A-203ENST00000527154 CD164L2Q6UWJ8 174 aa9.64□□□□□ -0.87
CHMP4A-203ENST00000527154 LYZL1Q6UWQ5 148 aa9.64□□□□□ -0.87
CHMP4A-203ENST00000527154 C9orf62Q8N4C0 152 aa9.64□□□□□ -0.87
CHMP4A-203ENST00000527154 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.63□□□□□ -0.87
CHMP4A-203ENST00000527154 IGKV2-29A2NJV5 120 aaPredicted RBP9.63□□□□□ -0.87
CHMP4A-203ENST00000527154 RAB19A4D1S5 217 aa9.63□□□□□ -0.87
CHMP4A-203ENST00000527154 IFNA1P01562 189 aa9.63□□□□□ -0.87
CHMP4A-203ENST00000527154 GNG4P50150 75 aa9.63□□□□□ -0.87
CHMP4A-203ENST00000527154 SMIM12Q96EX1 92 aa9.62□□□□□ -0.87
CHMP4A-203ENST00000527154 TAGLN2P37802 199 aaKnown RBP9.61□□□□□ -0.87
CHMP4A-203ENST00000527154 UBE2D1P51668 147 aa9.61□□□□□ -0.87
CHMP4A-203ENST00000527154 RNASEKQ6P5S7 137 aaKnown RBP9.61□□□□□ -0.87
CHMP4A-203ENST00000527154 GATD1Q8NB37 220 aa9.61□□□□□ -0.87
CHMP4A-203ENST00000527154 TSKUQ8WUA8 353 aa9.61□□□□□ -0.87
CHMP4A-203ENST00000527154 C2orf48Q96LS8 159 aa9.61□□□□□ -0.87
CHMP4A-203ENST00000527154 TWIST1Q15672 202 aa9.6□□□□□ -0.87
CHMP4A-203ENST00000527154 RNF151Q2KHN1 245 aa9.6□□□□□ -0.87
CHMP4A-203ENST00000527154 CNFNQ9BYD5 112 aa9.6□□□□□ -0.87
CHMP4A-203ENST00000527154 RPP21Q9H633 154 aaKnown RBP9.6□□□□□ -0.87
CHMP4A-203ENST00000527154 ESDP10768 282 aa9.59□□□□□ -0.87
CHMP4A-203ENST00000527154 CTRLP40313 264 aa9.59□□□□□ -0.87
CHMP4A-203ENST00000527154 BIN3Q9NQY0 253 aa9.59□□□□□ -0.87
CHMP4A-203ENST00000527154 TRBV20OR9-2A0A075B6H5 130 aa9.58□□□□□ -0.88
CHMP4A-203ENST00000527154 A0A087WZ39 114 aa9.58□□□□□ -0.88
CHMP4A-203ENST00000527154 PDE6DO43924 150 aa9.58□□□□□ -0.88
CHMP4A-203ENST00000527154 APCSP02743 223 aa9.58□□□□□ -0.88
CHMP4A-203ENST00000527154 MRPL52Q86TS9 123 aaKnown RBP9.58□□□□□ -0.88
CHMP4A-203ENST00000527154 CDC42SE2Q9NRR3 84 aa9.58□□□□□ -0.88
CHMP4A-203ENST00000527154 MED9Q9NWA0 146 aa9.58□□□□□ -0.88
CHMP4A-203ENST00000527154 SS18Q15532 418 aa9.57□□□□□ -0.88
CHMP4A-203ENST00000527154 KRTAP7-1Q8IUC3 87 aa9.57□□□□□ -0.88
CHMP4A-203ENST00000527154 NUDT10Q8NFP7 164 aa9.57□□□□□ -0.88
CHMP4A-203ENST00000527154 RPL39LQ96EH5 51 aaKnown RBP9.57□□□□□ -0.88
CHMP4A-203ENST00000527154 NUDT11Q96G61 164 aa9.57□□□□□ -0.88
CHMP4A-203ENST00000527154 CAMK2N2Q96S95 79 aa9.57□□□□□ -0.88
CHMP4A-203ENST00000527154 A0A1B0GVG6 124 aa9.56□□□□□ -0.88
CHMP4A-203ENST00000527154 BLOC1S1P78537 153 aa9.56□□□□□ -0.88
CHMP4A-203ENST00000527154 RPL18AQ02543 176 aaKnown RBP9.56□□□□□ -0.88
CHMP4A-203ENST00000527154 FAM168BA1KXE4 195 aa9.54□□□□□ -0.88
CHMP4A-203ENST00000527154 SDHAF1A6NFY7 115 aa9.54□□□□□ -0.88
CHMP4A-203ENST00000527154 TLX1NBP0CAT3 122 aa9.54□□□□□ -0.88
CHMP4A-203ENST00000527154 TPRXLQ17RH7 258 aa9.54□□□□□ -0.88
CHMP4A-203ENST00000527154 SMIM15Q7Z3B0 74 aa9.54□□□□□ -0.88
CHMP4A-203ENST00000527154 TMEM101Q96IK0 257 aa9.54□□□□□ -0.88
CHMP4A-203ENST00000527154 BTF3L4Q96K17 158 aa9.54□□□□□ -0.88
CHMP4A-203ENST00000527154 FAM210AQ96ND0 272 aa9.54□□□□□ -0.88
CHMP4A-203ENST00000527154 RNASE7Q9H1E1 156 aaKnown RBP9.54□□□□□ -0.88
CHMP4A-203ENST00000527154 TRBV6-5A0A0K0K1A5 114 aa9.53□□□□□ -0.88
CHMP4A-203ENST00000527154 TSPAN13O95857 204 aa9.53□□□□□ -0.88
CHMP4A-203ENST00000527154 OPRPNQ99935 248 aaPredicted RBP9.53□□□□□ -0.88
CHMP4A-203ENST00000527154 MRPL35Q9NZE8 188 aaKnown RBP9.53□□□□□ -0.88
CHMP4A-203ENST00000527154 COX7A2LO14548 114 aa9.52□□□□□ -0.89
CHMP4A-203ENST00000527154 FOXA3P55318 350 aaPredicted RBP9.52□□□□□ -0.89
CHMP4A-203ENST00000527154 TEX261Q6UWH6 196 aa9.52□□□□□ -0.89
CHMP4A-203ENST00000527154 ALKAL2Q6UX46 152 aa9.52□□□□□ -0.89
CHMP4A-203ENST00000527154 C1orf196B1AJZ1 125 aa9.51□□□□□ -0.89
CHMP4A-203ENST00000527154 I3L3M4 83 aa9.51□□□□□ -0.89
CHMP4A-203ENST00000527154 TSHBP01222 138 aa9.51□□□□□ -0.89
CHMP4A-203ENST00000527154 PMCHP20382 165 aa9.51□□□□□ -0.89
CHMP4A-203ENST00000527154 F8WDY8 70 aa9.5□□□□□ -0.89
CHMP4A-203ENST00000527154 K7EN84 100 aa9.5□□□□□ -0.89
CHMP4A-203ENST00000527154 MALP21145 153 aa9.5□□□□□ -0.89
CHMP4A-203ENST00000527154 OCC1Q8TAD7 63 aa9.5□□□□□ -0.89
CHMP4A-203ENST00000527154 A0A087X002 238 aa9.49□□□□□ -0.89
CHMP4A-203ENST00000527154 ZNF861PO60384 105 aa9.49□□□□□ -0.89
CHMP4A-203ENST00000527154 CSDC2Q9Y534 153 aaKnown RBP9.49□□□□□ -0.89
CHMP4A-203ENST00000527154 MRAP2Q96G30 205 aa9.48□□□□□ -0.89
CHMP4A-203ENST00000527154 IMMP2LQ96T52 175 aa9.48□□□□□ -0.89
CHMP4A-203ENST00000527154 TMEM250H0YL14 139 aa9.47□□□□□ -0.89
CHMP4A-203ENST00000527154 SPAG11BQ08648 103 aa9.47□□□□□ -0.89
CHMP4A-203ENST00000527154 OR10D4PQ8NGN7 298 aa9.47□□□□□ -0.89
CHMP4A-203ENST00000527154 TMEM242Q9NWH2 141 aa9.47□□□□□ -0.89
CHMP4A-203ENST00000527154 GATCO43716 136 aaKnown RBP9.46□□□□□ -0.9
CHMP4A-203ENST00000527154 FAM19A5Q7Z5A7 132 aaPredicted RBP9.46□□□□□ -0.9
CHMP4A-203ENST00000527154 ST20Q9HBF5 79 aa9.46□□□□□ -0.9
CHMP4A-203ENST00000527154 A8MWL6 223 aa9.45□□□□□ -0.9
CHMP4A-203ENST00000527154 POLR2KP53803 58 aaKnown RBP9.45□□□□□ -0.9
CHMP4A-203ENST00000527154 CDIP1Q9H305 208 aa9.45□□□□□ -0.9
CHMP4A-203ENST00000527154 SMDT1Q9H4I9 107 aa9.45□□□□□ -0.9
CHMP4A-203ENST00000527154 TRBV27A0A0K0K1C4 114 aa9.44□□□□□ -0.9
CHMP4A-203ENST00000527154 C7orf77A4D0Y5 90 aa9.44□□□□□ -0.9
CHMP4A-203ENST00000527154 M0QXV9 152 aa9.44□□□□□ -0.9
CHMP4A-203ENST00000527154 C10orf25Q5T742 122 aa9.44□□□□□ -0.9
CHMP4A-203ENST00000527154 C5orf38Q86SI9 138 aa9.44□□□□□ -0.9
CHMP4A-203ENST00000527154 BORCS7Q96B45 105 aa9.44□□□□□ -0.9
CHMP4A-203ENST00000527154 TMEM241Q24JQ0 296 aa9.43□□□□□ -0.9
CHMP4A-203ENST00000527154 UBE2BP63146 152 aa9.42□□□□□ -0.9
CHMP4A-203ENST00000527154 FAM231DQ6ZW35 169 aa9.42□□□□□ -0.9
CHMP4A-203ENST00000527154 EIF5A2Q9GZV4 153 aaKnown RBP9.42□□□□□ -0.9
CHMP4A-203ENST00000527154 C6orf48Q9UBA6 75 aa9.42□□□□□ -0.9
CHMP4A-203ENST00000527154 UBE2D4Q9Y2X8 147 aa9.42□□□□□ -0.9
CHMP4A-203ENST00000527154 CRYGAP11844 174 aa9.41□□□□□ -0.9
CHMP4A-203ENST00000527154 CTAG1AP78358 180 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms