RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 C16orf74Q96GX8 76 aa2.11□□□□□ -2.07
COPB1-205ENST00000526527 PLXNA2O75051 1894 aa2.11□□□□□ -2.07
COPB1-205ENST00000526527 TDRD6O60522 2096 aaKnown RBP2.1□□□□□ -2.07
COPB1-205ENST00000526527 IGKV1D-17A0A075B6S4 117 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 TMEM223A0PJW6 202 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 TMEM14DPA8MWL7 114 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 D6R8Y8 96 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 F8WEM9 126 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 H3BPC8 53 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 INSP01308 110 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 CMC4P56277 68 aaPredicted RBP2.1□□□□□ -2.07
COPB1-205ENST00000526527 DEFB133Q30KQ1 61 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 C9orf129Q5T035 196 aaKnown RBP2.1□□□□□ -2.07
COPB1-205ENST00000526527 LYZL1Q6UWQ5 148 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 IGFL3Q6UXB1 125 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 SDIM1Q6ZPB5 146 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 MUSTN1Q8IVN3 82 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 FAM223AQ8IWN6 122 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 FAM19A2Q8N3H0 131 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 PATE1Q8WXA2 126 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 CDC42SE1Q9NRR8 79 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 ICOSQ9Y6W8 199 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 CHD8Q9HCK8 2581 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 SHROOM3Q8TF72 1996 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 PCDH15Q96QU1 1955 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 CACNA1AO00555 2505 aa2.1□□□□□ -2.07
COPB1-205ENST00000526527 THADAQ6YHU6 1953 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 EML6Q6ZMW3 1958 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 ZNF292O60281 2723 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 IGLV3-9A0A075B6K5 115 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 C19orf71A6NCJ1 209 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 C11orf94C9JXX5 98 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 H7C2G1 150 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 PPP1R17O96001 155 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 IGLV2-23P01705 113 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 IGLV3-19P01714 112 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 BAALC-AS2P0C853 105 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 MIFP14174 115 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 C2orf83Q53S99 150 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 SFTA2Q6UW10 78 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 DYNAPQ8N1N2 210 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 Q8N814 137 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 TMEM14AQ9Y6G1 99 aa2.09□□□□□ -2.07
COPB1-205ENST00000526527 TNRC6BQ9UPQ9 1833 aaKnown RBP2.09□□□□□ -2.08
COPB1-205ENST00000526527 TPRP12270 2363 aaKnown RBP2.09□□□□□ -2.08
COPB1-205ENST00000526527 ASCC3Q8N3C0 2202 aaKnown RBP2.09□□□□□ -2.08
COPB1-205ENST00000526527 WDFY4Q6ZS81 3184 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 IGKV2D-26A0A0A0MRZ7 120 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 IGLV3-32A0A0A0MS00 114 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 SDHAF1A6NFY7 115 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 LINC01549A6NIU2 74 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 C10orf142B7Z368 130 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 DNAL4O96015 105 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 IGKV1D-33P01593 117 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 IGKV1-33P01594 117 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 TRGV3P03979 118 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 SAA2P0DJI9 122 aaPredicted RBP2.08□□□□□ -2.08
COPB1-205ENST00000526527 SPINT3P49223 89 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 C1orf134Q5TEV5 83 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 LYPD5Q6UWN5 251 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 ZCCHC23Q6ZST2 131 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 RPP21Q9H633 154 aaKnown RBP2.08□□□□□ -2.08
COPB1-205ENST00000526527 ZNRD1Q9P1U0 126 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 U3KQA8 63 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 ANKRD36A6QL64 1941 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 APC2O95996 2303 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 DOCK9Q9BZ29 2069 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 ACACBO00763 2458 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 MAP1BP46821 2468 aaKnown RBP2.08□□□□□ -2.08
COPB1-205ENST00000526527 ZFYVE26Q68DK2 2539 aa2.08□□□□□ -2.08
COPB1-205ENST00000526527 EPG5Q9HCE0 2579 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 CABIN1Q9Y6J0 2220 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 WDR87Q6ZQQ6 2873 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 IGHV3-15A0A0B4J1V0 119 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 TRAV22A0A0B4J277 110 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 SPTY2D1-AS1A0A0U1RR47 76 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 TEX49A0A1B0GTD5 131 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 FAM223BA6NKX1 122 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 A8MWP4 228 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 C16orf90A8MZG2 172 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 KRTAP4-16G5E9R7 235 aaPredicted RBP2.07□□□□□ -2.08
COPB1-205ENST00000526527 LECT2O14960 151 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 STATHP02808 62 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 PRB4P10163 310 aaPredicted RBP2.07□□□□□ -2.08
COPB1-205ENST00000526527 CAV3P56539 151 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 NDPQ00604 133 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 DEFB110Q30KQ9 67 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 FAM74A4Q5TZK3 123 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 CLECL1Q8IZS7 167 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 C20orf203Q8NBC4 194 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 ZNF563Q8TA94 476 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 COX14Q96I36 57 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 TMEM14BQ9NUH8 114 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 U3KQK5 164 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 ASXL3Q9C0F0 2248 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 VPS13AQ96RL7 3174 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 RAI1Q7Z5J4 1906 aaPredicted RBP2.07□□□□□ -2.08
COPB1-205ENST00000526527 TRPM6Q9BX84 2022 aa2.07□□□□□ -2.08
COPB1-205ENST00000526527 ANKRD12Q6UB98 2062 aa2.06□□□□□ -2.08
COPB1-205ENST00000526527 USP24Q9UPU5 2620 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 366 ms