RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 FOXA3P55318 350 aaPredicted RBP8.94□□□□□ -0.98
CSTF3-204ENST00000524556 NUP35Q8NFH5 326 aa8.94□□□□□ -0.98
CSTF3-204ENST00000524556 CDC42SE2Q9NRR3 84 aa8.94□□□□□ -0.98
CSTF3-204ENST00000524556 TRAV1-1A0A0B4J248 108 aa8.93□□□□□ -0.98
CSTF3-204ENST00000524556 EIF5AP63241 154 aaKnown RBP8.93□□□□□ -0.98
CSTF3-204ENST00000524556 EIF5AL1Q6IS14 154 aaKnown RBP8.93□□□□□ -0.98
CSTF3-204ENST00000524556 SMIM15Q7Z3B0 74 aa8.93□□□□□ -0.98
CSTF3-204ENST00000524556 DIRC1Q969H9 104 aa8.93□□□□□ -0.98
CSTF3-204ENST00000524556 BCL2L11O43521 198 aa8.92□□□□□ -0.98
CSTF3-204ENST00000524556 PDE6DO43924 150 aa8.92□□□□□ -0.98
CSTF3-204ENST00000524556 APOMO95445 188 aa8.92□□□□□ -0.98
CSTF3-204ENST00000524556 TSHBP01222 138 aa8.92□□□□□ -0.98
CSTF3-204ENST00000524556 MEF2BQ02080 365 aaPredicted RBP8.92□□□□□ -0.98
CSTF3-204ENST00000524556 PHF5AQ7RTV0 110 aaKnown RBP8.92□□□□□ -0.98
CSTF3-204ENST00000524556 MRPL52Q86TS9 123 aaKnown RBP8.92□□□□□ -0.98
CSTF3-204ENST00000524556 RPP21Q9H633 154 aaKnown RBP8.92□□□□□ -0.98
CSTF3-204ENST00000524556 MED9Q9NWA0 146 aa8.92□□□□□ -0.98
CSTF3-204ENST00000524556 FAT4Q6V0I7 4981 aa8.91□□□□□ -0.98
CSTF3-204ENST00000524556 TRBV6-5A0A0K0K1A5 114 aa8.91□□□□□ -0.98
CSTF3-204ENST00000524556 KANTRA0A1W2PQU2 76 aa8.91□□□□□ -0.98
CSTF3-204ENST00000524556 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.91□□□□□ -0.98
CSTF3-204ENST00000524556 IGLV7-43P04211 117 aa8.91□□□□□ -0.98
CSTF3-204ENST00000524556 MALP21145 153 aa8.91□□□□□ -0.98
CSTF3-204ENST00000524556 MRAP2Q96G30 205 aa8.91□□□□□ -0.98
CSTF3-204ENST00000524556 FAM210AQ96ND0 272 aa8.91□□□□□ -0.98
CSTF3-204ENST00000524556 CAMK2N2Q96S95 79 aa8.91□□□□□ -0.98
CSTF3-204ENST00000524556 HMSDA8MTL9 139 aa8.9□□□□□ -0.98
CSTF3-204ENST00000524556 COX7A2LO14548 114 aa8.9□□□□□ -0.98
CSTF3-204ENST00000524556 C2orf48Q96LS8 159 aa8.9□□□□□ -0.98
CSTF3-204ENST00000524556 RNASE7Q9H1E1 156 aaKnown RBP8.9□□□□□ -0.98
CSTF3-204ENST00000524556 TMEM242Q9NWH2 141 aa8.9□□□□□ -0.98
CSTF3-204ENST00000524556 A0A0U1RQV1 116 aa8.89□□□□□ -0.99
CSTF3-204ENST00000524556 C1orf196B1AJZ1 125 aa8.89□□□□□ -0.99
CSTF3-204ENST00000524556 H0Y9J4 135 aa8.89□□□□□ -0.99
CSTF3-204ENST00000524556 RPL18AQ02543 176 aaKnown RBP8.89□□□□□ -0.99
CSTF3-204ENST00000524556 ST20Q9HBF5 79 aa8.89□□□□□ -0.99
CSTF3-204ENST00000524556 IGLV1-50A0A075B6I6 118 aa8.88□□□□□ -0.99
CSTF3-204ENST00000524556 TEX46H3BTG2 121 aa8.88□□□□□ -0.99
CSTF3-204ENST00000524556 OPRPNQ99935 248 aaPredicted RBP8.88□□□□□ -0.99
CSTF3-204ENST00000524556 K7EN84 100 aa8.87□□□□□ -0.99
CSTF3-204ENST00000524556 POLR2KP53803 58 aaKnown RBP8.87□□□□□ -0.99
CSTF3-204ENST00000524556 PRR4Q16378 134 aa8.87□□□□□ -0.99
CSTF3-204ENST00000524556 RNF151Q2KHN1 245 aa8.87□□□□□ -0.99
CSTF3-204ENST00000524556 OCC1Q8TAD7 63 aa8.87□□□□□ -0.99
CSTF3-204ENST00000524556 A0A087WZ39 114 aa8.86□□□□□ -0.99
CSTF3-204ENST00000524556 C7orf77A4D0Y5 90 aa8.86□□□□□ -0.99
CSTF3-204ENST00000524556 TRBV27A0A0K0K1C4 114 aa8.85□□□□□ -0.99
CSTF3-204ENST00000524556 KRTAP1-4P0C5Y4 121 aa8.85□□□□□ -0.99
CSTF3-204ENST00000524556 C5orf38Q86SI9 138 aa8.85□□□□□ -0.99
CSTF3-204ENST00000524556 KRTAP11-1Q8IUC1 163 aa8.85□□□□□ -0.99
CSTF3-204ENST00000524556 TSKUQ8WUA8 353 aa8.85□□□□□ -0.99
CSTF3-204ENST00000524556 CSDC2Q9Y534 153 aaKnown RBP8.84□□□□□ -0.99
CSTF3-204ENST00000524556 TRAV13-1A0A0B4J241 112 aa8.83□□□□□ -1
CSTF3-204ENST00000524556 FAM168BA1KXE4 195 aa8.83□□□□□ -1
CSTF3-204ENST00000524556 SPAG11BQ08648 103 aa8.83□□□□□ -1
CSTF3-204ENST00000524556 RNASE13Q5GAN3 156 aaKnown RBP8.83□□□□□ -1
CSTF3-204ENST00000524556 A8MWL6 223 aa8.82□□□□□ -1
CSTF3-204ENST00000524556 GATCO43716 136 aaKnown RBP8.82□□□□□ -1
CSTF3-204ENST00000524556 SMAGPQ0VAQ4 97 aa8.82□□□□□ -1
CSTF3-204ENST00000524556 OR10D4PQ8NGN7 298 aa8.82□□□□□ -1
CSTF3-204ENST00000524556 MRPL35Q9NZE8 188 aaKnown RBP8.82□□□□□ -1
CSTF3-204ENST00000524556 UBE2D4Q9Y2X8 147 aa8.82□□□□□ -1
CSTF3-204ENST00000524556 VCYO14598 125 aa8.81□□□□□ -1
CSTF3-204ENST00000524556 UBE2D1P51668 147 aa8.81□□□□□ -1
CSTF3-204ENST00000524556 IMMP2LQ96T52 175 aa8.81□□□□□ -1
CSTF3-204ENST00000524556 TMEM191AQ9H0A3 160 aa8.81□□□□□ -1
CSTF3-204ENST00000524556 F8WDY8 70 aa8.8□□□□□ -1
CSTF3-204ENST00000524556 RAB4AP20338 218 aa8.8□□□□□ -1
CSTF3-204ENST00000524556 FCER1GP30273 86 aa8.8□□□□□ -1
CSTF3-204ENST00000524556 TAGLN2P37802 199 aaKnown RBP8.8□□□□□ -1
CSTF3-204ENST00000524556 RPL13AP40429 203 aaKnown RBP8.8□□□□□ -1
CSTF3-204ENST00000524556 RGS21Q2M5E4 152 aa8.8□□□□□ -1
CSTF3-204ENST00000524556 LCE2AQ5TA79 106 aaPredicted RBP8.8□□□□□ -1
CSTF3-204ENST00000524556 FAM231DQ6ZW35 169 aa8.8□□□□□ -1
CSTF3-204ENST00000524556 TLX1NBP0CAT3 122 aa8.79□□□□□ -1
CSTF3-204ENST00000524556 FAM19A5Q7Z5A7 132 aaPredicted RBP8.79□□□□□ -1
CSTF3-204ENST00000524556 BORCS7Q96B45 105 aa8.79□□□□□ -1
CSTF3-204ENST00000524556 BATF3Q9NR55 127 aa8.79□□□□□ -1
CSTF3-204ENST00000524556 KRTAP9-6A0A140TA67 174 aa8.78□□□□□ -1
CSTF3-204ENST00000524556 NDUFA1O15239 70 aa8.78□□□□□ -1
CSTF3-204ENST00000524556 TMEM241Q24JQ0 296 aa8.78□□□□□ -1
CSTF3-204ENST00000524556 CT83Q5H943 113 aa8.78□□□□□ -1
CSTF3-204ENST00000524556 C10orf25Q5T742 122 aa8.78□□□□□ -1
CSTF3-204ENST00000524556 Q6ZUT4 128 aa8.78□□□□□ -1
CSTF3-204ENST00000524556 KRTAP7-1Q8IUC3 87 aa8.78□□□□□ -1
CSTF3-204ENST00000524556 ORAOV1Q8WV07 137 aa8.78□□□□□ -1
CSTF3-204ENST00000524556 A0A1B0GUT8 65 aa8.77□□□□□ -1.01
CSTF3-204ENST00000524556 AMN1Q8IY45 258 aa8.77□□□□□ -1.01
CSTF3-204ENST00000524556 TIMM21Q9BVV7 248 aa8.77□□□□□ -1.01
CSTF3-204ENST00000524556 CARHSP1Q9Y2V2 147 aaKnown RBP8.77□□□□□ -1.01
CSTF3-204ENST00000524556 SMKR1H3BMG3 65 aa8.76□□□□□ -1.01
CSTF3-204ENST00000524556 UNQ6190/PRO20217Q6UXQ8 127 aa8.76□□□□□ -1.01
CSTF3-204ENST00000524556 C6orf48Q9UBA6 75 aa8.76□□□□□ -1.01
CSTF3-204ENST00000524556 IGHV3OR16-9A0A0B4J2B5 98 aa8.75□□□□□ -1.01
CSTF3-204ENST00000524556 HIGD1CA8MV81 97 aa8.75□□□□□ -1.01
CSTF3-204ENST00000524556 PPP1R17O96001 155 aa8.75□□□□□ -1.01
CSTF3-204ENST00000524556 SUMO2P61956 95 aaKnown RBP8.75□□□□□ -1.01
CSTF3-204ENST00000524556 UBE2BP63146 152 aa8.75□□□□□ -1.01
CSTF3-204ENST00000524556 GAGE2EQ4V326 116 aa8.75□□□□□ -1.01
CSTF3-204ENST00000524556 NRACQ8N912 160 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms