RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 LRP1Q07954 4544 aaKnown RBP3.87□□□□□ -1.79
SPIDR-216ENST00000521918 DMBT1Q9UGM3 2413 aaPredicted RBP3.86□□□□□ -1.79
SPIDR-216ENST00000521918 TRBV25-1A0A075B6N4 114 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 IGKV2D-24A0A075B6R9 120 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 IGHV1-24A0A0C4DH33 117 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 FAM231BA6NCW3 169 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 HIGD1CA8MV81 97 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 A8MWL6 223 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 LECT2O14960 151 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 CEBPGP53567 150 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 PKIAP61925 76 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 RPL23P62829 140 aaKnown RBP3.86□□□□□ -1.79
SPIDR-216ENST00000521918 RBX1P62877 108 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 Q0VG73 95 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 ELOBQ15370 118 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 C15orf54Q8N8G6 183 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 Q8N976 141 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 C20orf203Q8NBC4 194 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 TSKUQ8WUA8 353 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 BAALCQ8WXS3 180 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 ISOC2Q96AB3 205 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 RMI2Q96E14 147 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 RPL39LQ96EH5 51 aaKnown RBP3.86□□□□□ -1.79
SPIDR-216ENST00000521918 CHCHD5Q9BSY4 110 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 TMEM70Q9BUB7 260 aa3.86□□□□□ -1.79
SPIDR-216ENST00000521918 FLG2Q5D862 2391 aaPredicted RBP3.86□□□□□ -1.79
SPIDR-216ENST00000521918 TRBV6-5A0A0K0K1A5 114 aa3.85□□□□□ -1.79
SPIDR-216ENST00000521918 A0A1B0GUT8 65 aa3.85□□□□□ -1.79
SPIDR-216ENST00000521918 ZNF727A8MUV8 499 aa3.85□□□□□ -1.79
SPIDR-216ENST00000521918 GAS8-AS1O95177 125 aa3.85□□□□□ -1.79
SPIDR-216ENST00000521918 ANGP03950 147 aaKnown RBP3.85□□□□□ -1.79
SPIDR-216ENST00000521918 GAGE6Q13070 117 aa3.85□□□□□ -1.79
SPIDR-216ENST00000521918 MIAQ16674 131 aa3.85□□□□□ -1.79
SPIDR-216ENST00000521918 FAM74A3Q4VXF1 159 aa3.85□□□□□ -1.79
SPIDR-216ENST00000521918 ERASQ7Z444 233 aa3.85□□□□□ -1.79
SPIDR-216ENST00000521918 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.85□□□□□ -1.79
SPIDR-216ENST00000521918 RNF185Q96GF1 192 aa3.85□□□□□ -1.79
SPIDR-216ENST00000521918 TMEM191AQ9H0A3 160 aa3.85□□□□□ -1.79
SPIDR-216ENST00000521918 IGLV4-60A0A075B6I1 120 aa3.84□□□□□ -1.79
SPIDR-216ENST00000521918 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.84□□□□□ -1.79
SPIDR-216ENST00000521918 SDHAF1A6NFY7 115 aa3.84□□□□□ -1.79
SPIDR-216ENST00000521918 TMEM262E9PQX1 116 aa3.84□□□□□ -1.79
SPIDR-216ENST00000521918 CRPP02741 224 aa3.84□□□□□ -1.79
SPIDR-216ENST00000521918 HAMPP81172 84 aa3.84□□□□□ -1.79
SPIDR-216ENST00000521918 TMEM241Q24JQ0 296 aa3.84□□□□□ -1.79
SPIDR-216ENST00000521918 KCNIP4Q6PIL6 250 aa3.84□□□□□ -1.79
SPIDR-216ENST00000521918 CLPSL2Q6UWE3 100 aa3.84□□□□□ -1.79
SPIDR-216ENST00000521918 CD164L2Q6UWJ8 174 aa3.84□□□□□ -1.79
SPIDR-216ENST00000521918 LINC00269Q8N2A0 174 aa3.84□□□□□ -1.79
SPIDR-216ENST00000521918 NUP35Q8NFH5 326 aa3.84□□□□□ -1.79
SPIDR-216ENST00000521918 DEFB104AQ8WTQ1 72 aa3.84□□□□□ -1.79
SPIDR-216ENST00000521918 TMEM243Q9BU79 118 aa3.84□□□□□ -1.79
SPIDR-216ENST00000521918 SMDT1Q9H4I9 107 aa3.84□□□□□ -1.79
SPIDR-216ENST00000521918 NAT8Q9UHE5 227 aa3.84□□□□□ -1.79
SPIDR-216ENST00000521918 SMIM27A0A1W2PRY6 76 aa3.83□□□□□ -1.8
SPIDR-216ENST00000521918 NCR2O95944 276 aa3.83□□□□□ -1.8
SPIDR-216ENST00000521918 PRSS1P07477 247 aa3.83□□□□□ -1.8
SPIDR-216ENST00000521918 RAB4AP20338 218 aa3.83□□□□□ -1.8
SPIDR-216ENST00000521918 RPS10P46783 165 aaKnown RBP3.83□□□□□ -1.8
SPIDR-216ENST00000521918 POLR2KP53803 58 aaKnown RBP3.83□□□□□ -1.8
SPIDR-216ENST00000521918 REG3AQ06141 175 aa3.83□□□□□ -1.8
SPIDR-216ENST00000521918 COTL1Q14019 142 aa3.83□□□□□ -1.8
SPIDR-216ENST00000521918 ADIRFQ15847 76 aa3.83□□□□□ -1.8
SPIDR-216ENST00000521918 LINC01620Q4KN68 170 aa3.83□□□□□ -1.8
SPIDR-216ENST00000521918 Q5VSD8 79 aa3.83□□□□□ -1.8
SPIDR-216ENST00000521918 SMIM15Q7Z3B0 74 aa3.83□□□□□ -1.8
SPIDR-216ENST00000521918 TNXBP22105 4242 aa3.82□□□□□ -1.8
SPIDR-216ENST00000521918 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.82□□□□□ -1.8
SPIDR-216ENST00000521918 TRBV27A0A0K0K1C4 114 aa3.82□□□□□ -1.8
SPIDR-216ENST00000521918 A0A1B0GXF2 115 aa3.82□□□□□ -1.8
SPIDR-216ENST00000521918 IGKV2-29A2NJV5 120 aaPredicted RBP3.82□□□□□ -1.8
SPIDR-216ENST00000521918 EPM2AB3EWF7 344 aa3.82□□□□□ -1.8
SPIDR-216ENST00000521918 TSHBP01222 138 aa3.82□□□□□ -1.8
SPIDR-216ENST00000521918 ESDP10768 282 aa3.82□□□□□ -1.8
SPIDR-216ENST00000521918 HERV-K104P63124 156 aa3.82□□□□□ -1.8
SPIDR-216ENST00000521918 PEA15Q15121 130 aa3.82□□□□□ -1.8
SPIDR-216ENST00000521918 AMN1Q8IY45 258 aa3.82□□□□□ -1.8
SPIDR-216ENST00000521918 MRAP2Q96G30 205 aa3.82□□□□□ -1.8
SPIDR-216ENST00000521918 ALKBH7Q9BT30 221 aaPredicted RBP3.82□□□□□ -1.8
SPIDR-216ENST00000521918 VCX2Q9H322 139 aa3.82□□□□□ -1.8
SPIDR-216ENST00000521918 NAT8BQ9UHF3 227 aa3.82□□□□□ -1.8
SPIDR-216ENST00000521918 HMCN2Q8NDA2 5059 aa3.81□□□□□ -1.8
SPIDR-216ENST00000521918 IGLV10-54A0A075B6I4 117 aa3.81□□□□□ -1.8
SPIDR-216ENST00000521918 TRAV8-4A0A0B4J246 113 aa3.81□□□□□ -1.8
SPIDR-216ENST00000521918 SMKR1H3BMG3 65 aa3.81□□□□□ -1.8
SPIDR-216ENST00000521918 H7C423 109 aa3.81□□□□□ -1.8
SPIDR-216ENST00000521918 I3L3M4 83 aa3.81□□□□□ -1.8
SPIDR-216ENST00000521918 HLA-DQA1P01909 254 aa3.81□□□□□ -1.8
SPIDR-216ENST00000521918 APCSP02743 223 aa3.81□□□□□ -1.8
SPIDR-216ENST00000521918 SMR3BP02814 79 aaPredicted RBP3.81□□□□□ -1.8
SPIDR-216ENST00000521918 KRTAP10-4P60372 401 aaPredicted RBP3.81□□□□□ -1.8
SPIDR-216ENST00000521918 CNBPP62633 177 aaKnown RBP3.81□□□□□ -1.8
SPIDR-216ENST00000521918 C14orf177Q52M58 125 aa3.81□□□□□ -1.8
SPIDR-216ENST00000521918 FAM104BQ5XKR9 115 aa3.81□□□□□ -1.8
SPIDR-216ENST00000521918 SCXQ7RTU7 201 aa3.81□□□□□ -1.8
SPIDR-216ENST00000521918 MRPL52Q86TS9 123 aaKnown RBP3.81□□□□□ -1.8
SPIDR-216ENST00000521918 BORCS7Q96B45 105 aa3.81□□□□□ -1.8
SPIDR-216ENST00000521918 TMEM242Q9NWH2 141 aa3.81□□□□□ -1.8
SPIDR-216ENST00000521918 A0A1B0GW15 77 aa3.8□□□□□ -1.8
SPIDR-216ENST00000521918 UBE2L6O14933 153 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms