RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 OR2T8A6NH00 312 aa0.36□□□□□ -2.35
SKP1-205ENST00000519054 IQCF6A8MYZ5 107 aa0.36□□□□□ -2.35
SKP1-205ENST00000519054 MT-ND6P03923 174 aa0.36□□□□□ -2.35
SKP1-205ENST00000519054 ANP32AP39687 249 aaKnown RBP0.36□□□□□ -2.35
SKP1-205ENST00000519054 RHOBP62745 196 aa0.36□□□□□ -2.35
SKP1-205ENST00000519054 LINC01556Q5JQF7 62 aa0.36□□□□□ -2.35
SKP1-205ENST00000519054 LYRM7Q5U5X0 104 aa0.36□□□□□ -2.35
SKP1-205ENST00000519054 PATE2Q6UY27 113 aa0.36□□□□□ -2.35
SKP1-205ENST00000519054 TMEM35BQ8NCS4 154 aa0.36□□□□□ -2.35
SKP1-205ENST00000519054 MCEEQ96PE7 176 aa0.36□□□□□ -2.35
SKP1-205ENST00000519054 ENY2Q9NPA8 101 aa0.36□□□□□ -2.35
SKP1-205ENST00000519054 UBE2D4Q9Y2X8 147 aa0.36□□□□□ -2.35
SKP1-205ENST00000519054 FAM32AQ9Y421 112 aaKnown RBP0.36□□□□□ -2.35
SKP1-205ENST00000519054 TRGV10A0A0A0MS01 117 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 A8MWV9 139 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 OOSP1A8MZH6 123 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 K7EP13 123 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 TMEM256-PLSCR3K7ERE1 68 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 HMGB3O15347 200 aaKnown RBP0.35□□□□□ -2.35
SKP1-205ENST00000519054 PRH1P02810 166 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 EDDM3BP56851 147 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 POU6F1Q14863 301 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 SPA17Q15506 151 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 KRTAP19-8Q3LI54 63 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 DHRS4L2Q6PKH6 230 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 ZNF833PQ6ZTB9 187 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 ZNF714Q96N38 554 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 GPER1Q99527 375 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 OR2H1Q9GZK4 316 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 ARL2BPQ9Y2Y0 163 aa0.35□□□□□ -2.35
SKP1-205ENST00000519054 A0A087WSZ3 146 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 IGHV1-58A0A0C4DH39 117 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 E7EUB6 86 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 NUPR1O60356 82 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 GGCTO75223 188 aaKnown RBP0.34□□□□□ -2.36
SKP1-205ENST00000519054 IFNA7P01567 189 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 RBP4P02753 201 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 NFYBP25208 207 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 NCALDP61601 193 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 UBE2BP63146 152 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 PSPHP78330 225 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 PSG9Q00887 426 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 COX6A2Q02221 97 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 PXT1Q8NFP0 134 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 OR2T35Q8NGX2 323 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 ATP6V0E2Q8NHE4 81 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 VSTM2AQ8TAG5 236 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 TMEM254Q8TBM7 123 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 TSKUQ8WUA8 353 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 CHMP6Q96FZ7 201 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 LINC00052Q96N35 136 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 YPEL2Q96QA6 119 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 SLC25A21Q9BQT8 299 aaPredicted RBP0.34□□□□□ -2.36
SKP1-205ENST00000519054 TAS2R7Q9NYW3 318 aa0.34□□□□□ -2.36
SKP1-205ENST00000519054 H0YAA0 97 aa0.33□□□□□ -2.36
SKP1-205ENST00000519054 H3BNG1 76 aa0.33□□□□□ -2.36
SKP1-205ENST00000519054 ATP5HO75947 161 aa0.33□□□□□ -2.36
SKP1-205ENST00000519054 MPC1LP0DKB6 136 aa0.33□□□□□ -2.36
SKP1-205ENST00000519054 GNG10P50151 68 aa0.33□□□□□ -2.36
SKP1-205ENST00000519054 DEFB1P60022 68 aa0.33□□□□□ -2.36
SKP1-205ENST00000519054 SLC48A1Q6P1K1 146 aa0.33□□□□□ -2.36
SKP1-205ENST00000519054 DCUN1D2Q6PH85 259 aa0.33□□□□□ -2.36
SKP1-205ENST00000519054 MT1MQ8N339 61 aa0.33□□□□□ -2.36
SKP1-205ENST00000519054 GRPEL2Q8TAA5 225 aa0.33□□□□□ -2.36
SKP1-205ENST00000519054 CANT1Q8WVQ1 401 aa0.33□□□□□ -2.36
SKP1-205ENST00000519054 CST11Q9H112 138 aa0.33□□□□□ -2.36
SKP1-205ENST00000519054 NOP10Q9NPE3 64 aaKnown RBP0.33□□□□□ -2.36
SKP1-205ENST00000519054 COA4Q9NYJ1 87 aa0.33□□□□□ -2.36
SKP1-205ENST00000519054 PCTPQ9UKL6 214 aa0.33□□□□□ -2.36
SKP1-205ENST00000519054 PRNDQ9UKY0 176 aa0.33□□□□□ -2.36
SKP1-205ENST00000519054 TMEM14DPA8MWL7 114 aa0.32□□□□□ -2.36
SKP1-205ENST00000519054 E5RI56 91 aa0.32□□□□□ -2.36
SKP1-205ENST00000519054 GNG5P63218 68 aa0.32□□□□□ -2.36
SKP1-205ENST00000519054 MT1XP80297 61 aa0.32□□□□□ -2.36
SKP1-205ENST00000519054 RPL19P84098 196 aaKnown RBP0.32□□□□□ -2.36
SKP1-205ENST00000519054 LTC4SQ16873 150 aa0.32□□□□□ -2.36
SKP1-205ENST00000519054 BCL2L15Q5TBC7 163 aa0.32□□□□□ -2.36
SKP1-205ENST00000519054 C1orf140Q5VVS0 124 aa0.32□□□□□ -2.36
SKP1-205ENST00000519054 BORCS5Q969J3 196 aa0.32□□□□□ -2.36
SKP1-205ENST00000519054 USMG5Q96IX5 58 aa0.32□□□□□ -2.36
SKP1-205ENST00000519054 TP53RKQ96S44 253 aa0.32□□□□□ -2.36
SKP1-205ENST00000519054 NPCDR1Q9BY65 106 aa0.32□□□□□ -2.36
SKP1-205ENST00000519054 PBOV1Q9GZY1 135 aa0.32□□□□□ -2.36
SKP1-205ENST00000519054 ORMDL1Q9P0S3 153 aa0.32□□□□□ -2.36
SKP1-205ENST00000519054 A0A096LNI7 61 aa0.31□□□□□ -2.36
SKP1-205ENST00000519054 H3BUA1 57 aa0.31□□□□□ -2.36
SKP1-205ENST00000519054 CST8O60676 142 aa0.31□□□□□ -2.36
SKP1-205ENST00000519054 DNAL4O96015 105 aa0.31□□□□□ -2.36
SKP1-205ENST00000519054 MT1EP04732 61 aa0.31□□□□□ -2.36
SKP1-205ENST00000519054 CD2P06729 351 aa0.31□□□□□ -2.36
SKP1-205ENST00000519054 MT1GP13640 62 aa0.31□□□□□ -2.36
SKP1-205ENST00000519054 PHBP35232 272 aa0.31□□□□□ -2.36
SKP1-205ENST00000519054 POLR2HP52434 150 aaKnown RBP0.31□□□□□ -2.36
SKP1-205ENST00000519054 MRPS25P82663 173 aaKnown RBP0.31□□□□□ -2.36
SKP1-205ENST00000519054 MRPS15P82914 257 aaKnown RBP0.31□□□□□ -2.36
SKP1-205ENST00000519054 KRTAP6-2Q3LI66 62 aa0.31□□□□□ -2.36
SKP1-205ENST00000519054 FAM74A1Q5RGS3 127 aa0.31□□□□□ -2.36
SKP1-205ENST00000519054 HACD4Q5VWC8 232 aa0.31□□□□□ -2.36
SKP1-205ENST00000519054 C4orf22Q6V702 233 aa0.31□□□□□ -2.36
SKP1-205ENST00000519054 HEPN1Q6WQI6 88 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms