RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 K7EQD1 137 aa5.12□□□□□ -1.59
CLCN3-206ENST00000507875 ZC2HC1BQ5TFG8 222 aa5.12□□□□□ -1.59
CLCN3-206ENST00000507875 AGPAT4-IT1Q9H0P7 198 aa5.12□□□□□ -1.59
CLCN3-206ENST00000507875 IGHV1-24A0A0C4DH33 117 aa5.11□□□□□ -1.59
CLCN3-206ENST00000507875 A0A0J9YX75 114 aa5.11□□□□□ -1.59
CLCN3-206ENST00000507875 NFE4Q86UQ8 179 aa5.11□□□□□ -1.59
CLCN3-206ENST00000507875 PCP2Q8IVA1 136 aa5.11□□□□□ -1.59
CLCN3-206ENST00000507875 WFDC9Q8NEX5 89 aa5.11□□□□□ -1.59
CLCN3-206ENST00000507875 UQCR10Q9UDW1 63 aa5.11□□□□□ -1.59
CLCN3-206ENST00000507875 PMCHL1Q16048 86 aa5.11□□□□□ -1.59
CLCN3-206ENST00000507875 LINC00242Q5T6M2 205 aa5.11□□□□□ -1.59
CLCN3-206ENST00000507875 FAM104BQ5XKR9 115 aa5.11□□□□□ -1.59
CLCN3-206ENST00000507875 MRPS16Q9Y3D3 137 aaKnown RBP5.11□□□□□ -1.59
CLCN3-206ENST00000507875 NBEAL1Q6ZS30 2694 aa5.1□□□□□ -1.59
CLCN3-206ENST00000507875 TRAV4A0A0B4J268 109 aa5.1□□□□□ -1.59
CLCN3-206ENST00000507875 TWIST1Q15672 202 aa5.1□□□□□ -1.59
CLCN3-206ENST00000507875 MUC21Q5SSG8 566 aa5.1□□□□□ -1.59
CLCN3-206ENST00000507875 TMEM61Q8N0U2 210 aa5.1□□□□□ -1.59
CLCN3-206ENST00000507875 C10orf126Q8N4M7 172 aa5.1□□□□□ -1.59
CLCN3-206ENST00000507875 CNFNQ9BYD5 112 aa5.1□□□□□ -1.59
CLCN3-206ENST00000507875 IGHV4-4A0A075B6R2 117 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 TRAV21A0A0B4J279 112 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 MUC21A0A140T8X8 626 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 D6R8Y8 96 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 LEPROTL1O95214 131 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 HLA-DRB4P13762 266 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 KRTAP10-2P60368 255 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 SPATA45Q537H7 98 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 AMN1Q8IY45 258 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 NTN5Q8WTR8 489 aaPredicted RBP5.09□□□□□ -1.59
CLCN3-206ENST00000507875 C20orf78Q9BR46 151 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 TMEM70Q9BUB7 260 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 U3KQK5 164 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 HLA-DRB4X5D2U9 266 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 IGKV3D-20A0A0C4DH25 116 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 K7EP34 96 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 PSMG4Q5JS54 123 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 ORMDL3Q8N138 153 aa5.09□□□□□ -1.59
CLCN3-206ENST00000507875 KLLNB2CW77 178 aa5.08□□□□□ -1.6
CLCN3-206ENST00000507875 MRPL51Q4U2R6 128 aaKnown RBP5.08□□□□□ -1.6
CLCN3-206ENST00000507875 GTSCR1Q86UQ5 136 aa5.08□□□□□ -1.6
CLCN3-206ENST00000507875 LINC00467Q9BRT7 94 aa5.08□□□□□ -1.6
CLCN3-206ENST00000507875 TMEM191AQ9H0A3 160 aa5.08□□□□□ -1.6
CLCN3-206ENST00000507875 SYS1-DBNDD2H3BUS1 97 aa5.08□□□□□ -1.6
CLCN3-206ENST00000507875 ZNF688P0C7X2 276 aa5.08□□□□□ -1.6
CLCN3-206ENST00000507875 IFI27P40305 119 aaPredicted RBP5.08□□□□□ -1.6
CLCN3-206ENST00000507875 C9orf153Q5TBE3 101 aa5.08□□□□□ -1.6
CLCN3-206ENST00000507875 MORN3Q6PF18 240 aaPredicted RBP5.08□□□□□ -1.6
CLCN3-206ENST00000507875 LINC00173Q6ZV60 143 aa5.08□□□□□ -1.6
CLCN3-206ENST00000507875 ATOH7Q8N100 152 aa5.08□□□□□ -1.6
CLCN3-206ENST00000507875 C11orf72Q8NBR9 251 aa5.08□□□□□ -1.6
CLCN3-206ENST00000507875 PRELID3AQ96N28 172 aa5.08□□□□□ -1.6
CLCN3-206ENST00000507875 TRAV9-2A0A087WT02 112 aa5.07□□□□□ -1.6
CLCN3-206ENST00000507875 RPL37AP8A6NKH3 93 aa5.07□□□□□ -1.6
CLCN3-206ENST00000507875 CKS2P33552 79 aa5.07□□□□□ -1.6
CLCN3-206ENST00000507875 DEFB131AP59861 70 aa5.07□□□□□ -1.6
CLCN3-206ENST00000507875 SPATA12Q7Z6I5 190 aa5.07□□□□□ -1.6
CLCN3-206ENST00000507875 ZFAND2AQ8N6M9 145 aa5.07□□□□□ -1.6
CLCN3-206ENST00000507875 RPL36ALQ969Q0 106 aaKnown RBP5.07□□□□□ -1.6
CLCN3-206ENST00000507875 SMIM1B2RUZ4 78 aa5.07□□□□□ -1.6
CLCN3-206ENST00000507875 H3BMM0 161 aa5.07□□□□□ -1.6
CLCN3-206ENST00000507875 IGLC3P0DOY3 106 aa5.07□□□□□ -1.6
CLCN3-206ENST00000507875 LINC00337Q8N6G1 96 aa5.07□□□□□ -1.6
CLCN3-206ENST00000507875 IGKV3-7A0A075B6H7 116 aa5.06□□□□□ -1.6
CLCN3-206ENST00000507875 LOC389332A0A1B0GUA5 103 aa5.06□□□□□ -1.6
CLCN3-206ENST00000507875 SLC25A34Q6PIV7 304 aa5.06□□□□□ -1.6
CLCN3-206ENST00000507875 AMTNQ6UX39 209 aa5.06□□□□□ -1.6
CLCN3-206ENST00000507875 OR10AG1Q8NH19 301 aa5.06□□□□□ -1.6
CLCN3-206ENST00000507875 RNF185Q96GF1 192 aa5.06□□□□□ -1.6
CLCN3-206ENST00000507875 PRR9Q5T870 116 aa5.06□□□□□ -1.6
CLCN3-206ENST00000507875 Q6ZQT7 251 aa5.06□□□□□ -1.6
CLCN3-206ENST00000507875 TP73-AS1Q9UF72 201 aa5.06□□□□□ -1.6
CLCN3-206ENST00000507875 SMIM26A0A096LP01 95 aa5.05□□□□□ -1.6
CLCN3-206ENST00000507875 NDUFS5O43920 106 aa5.05□□□□□ -1.6
CLCN3-206ENST00000507875 NPYP01303 97 aa5.05□□□□□ -1.6
CLCN3-206ENST00000507875 IGLL1P15814 213 aa5.05□□□□□ -1.6
CLCN3-206ENST00000507875 TIMM8BQ9Y5J9 83 aaPredicted RBP5.05□□□□□ -1.6
CLCN3-206ENST00000507875 MGAM2Q2M2H8 2515 aa5.05□□□□□ -1.6
CLCN3-206ENST00000507875 A0A096LNJ9 63 aa5.05□□□□□ -1.6
CLCN3-206ENST00000507875 A8MWV9 139 aa5.05□□□□□ -1.6
CLCN3-206ENST00000507875 NCR2O95944 276 aa5.05□□□□□ -1.6
CLCN3-206ENST00000507875 FABP2P12104 132 aa5.05□□□□□ -1.6
CLCN3-206ENST00000507875 TM2D3Q9BRN9 247 aa5.05□□□□□ -1.6
CLCN3-206ENST00000507875 DEFB1P60022 68 aa5.04□□□□□ -1.6
CLCN3-206ENST00000507875 PRR15Q8IV56 129 aa5.04□□□□□ -1.6
CLCN3-206ENST00000507875 DSCR8Q96T75 97 aa5.04□□□□□ -1.6
CLCN3-206ENST00000507875 E9PLD3 99 aa5.04□□□□□ -1.6
CLCN3-206ENST00000507875 GAS8-AS1O95177 125 aa5.04□□□□□ -1.6
CLCN3-206ENST00000507875 HBDP02042 147 aa5.04□□□□□ -1.6
CLCN3-206ENST00000507875 SPANXN1Q5VSR9 72 aa5.04□□□□□ -1.6
CLCN3-206ENST00000507875 LINC01545Q5VT33 79 aa5.04□□□□□ -1.6
CLCN3-206ENST00000507875 PKD1L1Q8TDX9 2849 aa5.03□□□□□ -1.6
CLCN3-206ENST00000507875 LINC01546A6NGU7 62 aa5.03□□□□□ -1.6
CLCN3-206ENST00000507875 H3BVH4 76 aa5.03□□□□□ -1.6
CLCN3-206ENST00000507875 INSP01308 110 aa5.03□□□□□ -1.6
CLCN3-206ENST00000507875 RNASE4P34096 147 aaKnown RBP5.03□□□□□ -1.6
CLCN3-206ENST00000507875 ASIPP42127 132 aa5.03□□□□□ -1.6
CLCN3-206ENST00000507875 RBMY1FQ15415 496 aaKnown RBP5.03□□□□□ -1.6
CLCN3-206ENST00000507875 SMIM29Q86T20 159 aa5.03□□□□□ -1.6
CLCN3-206ENST00000507875 ST20Q9HBF5 79 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms