RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 MBD3L4A6NDZ8 208 aaPredicted RBP5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 MBD3L3A6NE82 208 aaPredicted RBP5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 MBD3L5A6NJ08 208 aaPredicted RBP5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 NHLRC4P0CG21 123 aaPredicted RBP5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 UBE2D1P51668 147 aa5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 TIRAPP58753 221 aa5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 MBD3L2Q8NHZ7 208 aaPredicted RBP5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 COX7B2Q8TF08 81 aa5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 ODF3Q96PU9 254 aa5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 IGLV1-47P01700 117 aa5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 THBDP07204 575 aa5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 NANOS2P60321 138 aaKnown RBP5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 LINC00643Q86TS7 51 aa5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 MAST4O15021 2626 aa5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 CSMD1Q96PZ7 3565 aa5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 LY6DQ14210 128 aa5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 STHQ8IWL8 128 aa5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 FAM223AQ8IWN6 122 aa5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 LINC00526Q96FQ7 95 aa5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 PRORYQ9H606 182 aa5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 GCN1Q92616 2671 aaKnown RBP5.84□□□□□ -1.47
ATP2C1-208ENST00000504948 USP17L23D6RBM5 183 aa5.84□□□□□ -1.48
ATP2C1-208ENST00000504948 C10orf99Q6UWK7 81 aa5.83□□□□□ -1.48
ATP2C1-208ENST00000504948 COPS9Q8WXC6 57 aa5.83□□□□□ -1.48
ATP2C1-208ENST00000504948 IGHV7-4-1A0A0J9YVY3 117 aa5.83□□□□□ -1.48
ATP2C1-208ENST00000504948 H3BT86 120 aa5.83□□□□□ -1.48
ATP2C1-208ENST00000504948 IGHG3P01860 377 aa5.83□□□□□ -1.48
ATP2C1-208ENST00000504948 PSMB8P28062 276 aa5.83□□□□□ -1.48
ATP2C1-208ENST00000504948 C20orf203Q8NBC4 194 aa5.83□□□□□ -1.48
ATP2C1-208ENST00000504948 U3KQK5 164 aa5.83□□□□□ -1.48
ATP2C1-208ENST00000504948 MGAM2Q2M2H8 2515 aa5.83□□□□□ -1.48
ATP2C1-208ENST00000504948 UBE2D3P61077 147 aa5.83□□□□□ -1.48
ATP2C1-208ENST00000504948 UBE2D2P62837 147 aa5.83□□□□□ -1.48
ATP2C1-208ENST00000504948 SPTSSBQ8NFR3 76 aa5.83□□□□□ -1.48
ATP2C1-208ENST00000504948 TRBV7-1A0A0A6YYK4 115 aa5.82□□□□□ -1.48
ATP2C1-208ENST00000504948 FSTL3O95633 263 aa5.82□□□□□ -1.48
ATP2C1-208ENST00000504948 FAM110DQ8TAY7 271 aaPredicted RBP5.82□□□□□ -1.48
ATP2C1-208ENST00000504948 CCDC140Q96MF4 163 aa5.82□□□□□ -1.48
ATP2C1-208ENST00000504948 HECTD1Q9ULT8 2610 aa5.82□□□□□ -1.48
ATP2C1-208ENST00000504948 IGLV4-3A0A075B6K6 122 aa5.82□□□□□ -1.48
ATP2C1-208ENST00000504948 HIST2H2BCQ6DN03 193 aa5.82□□□□□ -1.48
ATP2C1-208ENST00000504948 TMEM263Q8WUH6 116 aaKnown RBP5.82□□□□□ -1.48
ATP2C1-208ENST00000504948 U3KQE9 123 aa5.82□□□□□ -1.48
ATP2C1-208ENST00000504948 MINOS1Q5TGZ0 78 aa5.82□□□□□ -1.48
ATP2C1-208ENST00000504948 LINC00311Q8N616 119 aa5.82□□□□□ -1.48
ATP2C1-208ENST00000504948 LINC00467Q9BRT7 94 aa5.82□□□□□ -1.48
ATP2C1-208ENST00000504948 TENM4Q6N022 2769 aa5.81□□□□□ -1.48
ATP2C1-208ENST00000504948 FAM236DA0A1B0GTK5 79 aa5.81□□□□□ -1.48
ATP2C1-208ENST00000504948 FAM236CP0DP71 79 aa5.81□□□□□ -1.48
ATP2C1-208ENST00000504948 Q8N9W7 124 aa5.81□□□□□ -1.48
ATP2C1-208ENST00000504948 Q9UF83 564 aa5.81□□□□□ -1.48
ATP2C1-208ENST00000504948 TRAV13-2A0A0B4J235 113 aa5.81□□□□□ -1.48
ATP2C1-208ENST00000504948 ZFP36P26651 326 aaKnown RBP5.81□□□□□ -1.48
ATP2C1-208ENST00000504948 PRR3P79522 188 aaKnown RBP5.81□□□□□ -1.48
ATP2C1-208ENST00000504948 DNAJC30Q96LL9 226 aa5.81□□□□□ -1.48
ATP2C1-208ENST00000504948 FLNBO75369 2602 aaKnown RBP5.81□□□□□ -1.48
ATP2C1-208ENST00000504948 IGHV1-58A0A0C4DH39 117 aa5.81□□□□□ -1.48
ATP2C1-208ENST00000504948 C8orf31Q8N9H6 132 aa5.81□□□□□ -1.48
ATP2C1-208ENST00000504948 DCANP1Q8TF63 244 aa5.81□□□□□ -1.48
ATP2C1-208ENST00000504948 CXCL5P42830 114 aa5.8□□□□□ -1.48
ATP2C1-208ENST00000504948 MIAQ16674 131 aa5.8□□□□□ -1.48
ATP2C1-208ENST00000504948 COX7CP15954 63 aa5.8□□□□□ -1.48
ATP2C1-208ENST00000504948 FAM19A1Q7Z5A9 133 aa5.8□□□□□ -1.48
ATP2C1-208ENST00000504948 NOP10Q9NPE3 64 aaKnown RBP5.8□□□□□ -1.48
ATP2C1-208ENST00000504948 C19orf84I3L1E1 186 aa5.8□□□□□ -1.48
ATP2C1-208ENST00000504948 DEFB4AO15263 64 aa5.8□□□□□ -1.48
ATP2C1-208ENST00000504948 ZFAND2AQ8N6M9 145 aa5.8□□□□□ -1.48
ATP2C1-208ENST00000504948 NRGNQ92686 78 aa5.8□□□□□ -1.48
ATP2C1-208ENST00000504948 NBEAL1Q6ZS30 2694 aa5.8□□□□□ -1.48
ATP2C1-208ENST00000504948 TMEM223A0PJW6 202 aa5.8□□□□□ -1.48
ATP2C1-208ENST00000504948 RNASE3P12724 160 aaKnown RBP5.8□□□□□ -1.48
ATP2C1-208ENST00000504948 MRPL53Q96EL3 112 aaKnown RBP5.8□□□□□ -1.48
ATP2C1-208ENST00000504948 IGLV4-69A0A075B6H9 119 aa5.79□□□□□ -1.48
ATP2C1-208ENST00000504948 VSIG2Q96IQ7 327 aa5.79□□□□□ -1.48
ATP2C1-208ENST00000504948 IGHV1-69DA0A0B4J2H0 117 aa5.79□□□□□ -1.48
ATP2C1-208ENST00000504948 UPK3BQ9BT76 320 aa5.79□□□□□ -1.48
ATP2C1-208ENST00000504948 CRYBG3Q68DQ2 2970 aa5.79□□□□□ -1.48
ATP2C1-208ENST00000504948 ITPR3Q14573 2671 aa5.79□□□□□ -1.48
ATP2C1-208ENST00000504948 LINC00308Q8TCZ7 52 aa5.79□□□□□ -1.48
ATP2C1-208ENST00000504948 TIMM17AQ99595 171 aa5.79□□□□□ -1.48
ATP2C1-208ENST00000504948 CRYGDP07320 174 aa5.79□□□□□ -1.48
ATP2C1-208ENST00000504948 Q6Q795 121 aa5.79□□□□□ -1.48
ATP2C1-208ENST00000504948 Q8N2B8 174 aa5.79□□□□□ -1.48
ATP2C1-208ENST00000504948 ORMDL1Q9P0S3 153 aa5.79□□□□□ -1.48
ATP2C1-208ENST00000504948 A8MTW9 85 aa5.78□□□□□ -1.48
ATP2C1-208ENST00000504948 LST1O00453 97 aa5.78□□□□□ -1.48
ATP2C1-208ENST00000504948 EIF4EBP3O60516 100 aaPredicted RBP5.78□□□□□ -1.48
ATP2C1-208ENST00000504948 IGHV4-38-2P0DP08 117 aa5.78□□□□□ -1.48
ATP2C1-208ENST00000504948 ZMAT4Q9H898 229 aa5.78□□□□□ -1.48
ATP2C1-208ENST00000504948 BRI3O95415 125 aa5.78□□□□□ -1.48
ATP2C1-208ENST00000504948 IGHG2P01859 326 aa5.78□□□□□ -1.48
ATP2C1-208ENST00000504948 RNF5Q99942 180 aa5.78□□□□□ -1.48
ATP2C1-208ENST00000504948 COX7A2LO14548 114 aa5.78□□□□□ -1.48
ATP2C1-208ENST00000504948 SLURP1P55000 103 aa5.78□□□□□ -1.48
ATP2C1-208ENST00000504948 NPBQ8NG41 125 aa5.78□□□□□ -1.48
ATP2C1-208ENST00000504948 TSHBP01222 138 aa5.77□□□□□ -1.49
ATP2C1-208ENST00000504948 RAI1Q7Z5J4 1906 aaPredicted RBP5.77□□□□□ -1.49
ATP2C1-208ENST00000504948 UNC79Q9P2D8 2635 aa5.77□□□□□ -1.49
ATP2C1-208ENST00000504948 C9orf47Q6ZRZ4 202 aa5.77□□□□□ -1.49
ATP2C1-208ENST00000504948 SIRPDQ9H106 197 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms