RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 CST9LQ9H4G1 147 aa14.32□□□□□ -0.12
KPNA1-210ENST00000494339 TRBV25-1A0A075B6N4 114 aa14.31□□□□□ -0.12
KPNA1-210ENST00000494339 TRBV6-8A0A0A6YYG3 113 aa14.31□□□□□ -0.12
KPNA1-210ENST00000494339 CEMP1Q6PRD7 247 aaPredicted RBP14.31□□□□□ -0.12
KPNA1-210ENST00000494339 STAB2Q8WWQ8 2551 aa14.31□□□□□ -0.12
KPNA1-210ENST00000494339 STPG4Q8N801 248 aa14.31□□□□□ -0.12
KPNA1-210ENST00000494339 TRAV10A0A0B4J240 114 aa14.3□□□□□ -0.12
KPNA1-210ENST00000494339 OPRPNQ99935 248 aaPredicted RBP14.3□□□□□ -0.12
KPNA1-210ENST00000494339 TMEM243Q9BU79 118 aa14.3□□□□□ -0.12
KPNA1-210ENST00000494339 IGLV4-3A0A075B6K6 122 aa14.29□□□□□ -0.12
KPNA1-210ENST00000494339 H3BNG1 76 aa14.29□□□□□ -0.12
KPNA1-210ENST00000494339 ANKRD39Q53RE8 183 aa14.29□□□□□ -0.12
KPNA1-210ENST00000494339 TMEM97Q5BJF2 176 aa14.29□□□□□ -0.12
KPNA1-210ENST00000494339 TIMM21Q9BVV7 248 aa14.29□□□□□ -0.12
KPNA1-210ENST00000494339 UBE2D4Q9Y2X8 147 aa14.29□□□□□ -0.12
KPNA1-210ENST00000494339 SMAGPQ0VAQ4 97 aa14.28□□□□□ -0.12
KPNA1-210ENST00000494339 ZC2HC1BQ5TFG8 222 aa14.28□□□□□ -0.12
KPNA1-210ENST00000494339 SLC25A34Q6PIV7 304 aa14.28□□□□□ -0.12
KPNA1-210ENST00000494339 VCX2Q9H322 139 aa14.28□□□□□ -0.12
KPNA1-210ENST00000494339 COX8AP10176 69 aa14.27□□□□□ -0.12
KPNA1-210ENST00000494339 UBE2L6O14933 153 aa14.27□□□□□ -0.13
KPNA1-210ENST00000494339 SH2D6Q7Z4S9 175 aa14.27□□□□□ -0.13
KPNA1-210ENST00000494339 CHCHD5Q9BSY4 110 aa14.27□□□□□ -0.13
KPNA1-210ENST00000494339 FGF6P10767 208 aa14.25□□□□□ -0.13
KPNA1-210ENST00000494339 HNRNPA3P51991 378 aaKnown RBP14.25□□□□□ -0.13
KPNA1-210ENST00000494339 AMELXQ99217 191 aa14.25□□□□□ -0.13
KPNA1-210ENST00000494339 IGLV4-69A0A075B6H9 119 aa14.25□□□□□ -0.13
KPNA1-210ENST00000494339 GAGE6Q13070 117 aa14.25□□□□□ -0.13
KPNA1-210ENST00000494339 H7C423 109 aa14.24□□□□□ -0.13
KPNA1-210ENST00000494339 MRPS36P82909 103 aaKnown RBP14.24□□□□□ -0.13
KPNA1-210ENST00000494339 RNASE13Q5GAN3 156 aaKnown RBP14.24□□□□□ -0.13
KPNA1-210ENST00000494339 MRPL52Q86TS9 123 aaKnown RBP14.24□□□□□ -0.13
KPNA1-210ENST00000494339 FAM104AQ969W3 186 aa14.24□□□□□ -0.13
KPNA1-210ENST00000494339 CSDC2Q9Y534 153 aaKnown RBP14.24□□□□□ -0.13
KPNA1-210ENST00000494339 DGAT2L7PQ6IED9 249 aa14.23□□□□□ -0.13
KPNA1-210ENST00000494339 AMMECR1LQ6DCA0 310 aa14.23□□□□□ -0.13
KPNA1-210ENST00000494339 MRPS16Q9Y3D3 137 aaKnown RBP14.23□□□□□ -0.13
KPNA1-210ENST00000494339 Q6ZUT4 128 aa14.22□□□□□ -0.13
KPNA1-210ENST00000494339 NFE4Q86UQ8 179 aa14.22□□□□□ -0.13
KPNA1-210ENST00000494339 C11orf86A6NJI1 115 aa14.21□□□□□ -0.13
KPNA1-210ENST00000494339 DLEU1O43261 78 aa14.21□□□□□ -0.13
KPNA1-210ENST00000494339 NMUP48645 174 aa14.21□□□□□ -0.13
KPNA1-210ENST00000494339 LYPD5Q6UWN5 251 aa14.21□□□□□ -0.13
KPNA1-210ENST00000494339 BOD1L2Q8IYS8 172 aa14.21□□□□□ -0.14
KPNA1-210ENST00000494339 C2orf88Q9BSF0 95 aa14.2□□□□□ -0.14
KPNA1-210ENST00000494339 IGLL5B9A064 214 aa14.19□□□□□ -0.14
KPNA1-210ENST00000494339 TMEM262E9PQX1 116 aa14.19□□□□□ -0.14
KPNA1-210ENST00000494339 CTAG1AP78358 180 aa14.19□□□□□ -0.14
KPNA1-210ENST00000494339 OR5A1Q8NGJ0 315 aa14.19□□□□□ -0.14
KPNA1-210ENST00000494339 TCTAP57738 103 aa14.19□□□□□ -0.14
KPNA1-210ENST00000494339 LELP1Q5T871 98 aa14.19□□□□□ -0.14
KPNA1-210ENST00000494339 TMEM101Q96IK0 257 aa14.19□□□□□ -0.14
KPNA1-210ENST00000494339 IGKV2D-26A0A0A0MRZ7 120 aa14.18□□□□□ -0.14
KPNA1-210ENST00000494339 CHAC1Q9BUX1 264 aa14.18□□□□□ -0.14
KPNA1-210ENST00000494339 M0R143 59 aa14.17□□□□□ -0.14
KPNA1-210ENST00000494339 ZNF25P17030 456 aaPredicted RBP14.17□□□□□ -0.14
KPNA1-210ENST00000494339 HERVK_113P61574 105 aa14.17□□□□□ -0.14
KPNA1-210ENST00000494339 C15orf53Q8NAA6 179 aa14.17□□□□□ -0.14
KPNA1-210ENST00000494339 MPV17L2Q567V2 206 aa14.17□□□□□ -0.14
KPNA1-210ENST00000494339 IGLV4-60A0A075B6I1 120 aa14.16□□□□□ -0.14
KPNA1-210ENST00000494339 E9PLD3 99 aa14.16□□□□□ -0.14
KPNA1-210ENST00000494339 ESRGQ1W209 222 aa14.16□□□□□ -0.14
KPNA1-210ENST00000494339 TMEM170BQ5T4T1 132 aa14.16□□□□□ -0.14
KPNA1-210ENST00000494339 PCP2Q8IVA1 136 aa14.16□□□□□ -0.14
KPNA1-210ENST00000494339 CDC42SE2Q9NRR3 84 aa14.16□□□□□ -0.14
KPNA1-210ENST00000494339 A0A0J9YXV3 536 aa14.15□□□□□ -0.14
KPNA1-210ENST00000494339 SIVA1O15304 175 aa14.15□□□□□ -0.14
KPNA1-210ENST00000494339 TIRAPP58753 221 aa14.15□□□□□ -0.14
KPNA1-210ENST00000494339 TP73-AS1Q9UF72 201 aa14.15□□□□□ -0.14
KPNA1-210ENST00000494339 LBHQ53QV2 105 aaPredicted RBP14.14□□□□□ -0.15
KPNA1-210ENST00000494339 Q8N3U1 123 aa14.14□□□□□ -0.15
KPNA1-210ENST00000494339 TINCRA0A1B0GVN0 87 aa14.13□□□□□ -0.15
KPNA1-210ENST00000494339 RBX1P62877 108 aa14.13□□□□□ -0.15
KPNA1-210ENST00000494339 SNHG12Q9BXW3 62 aa14.13□□□□□ -0.15
KPNA1-210ENST00000494339 TRAV8-6A0A0B4J262 113 aa14.12□□□□□ -0.15
KPNA1-210ENST00000494339 ZNF22P17026 224 aaPredicted RBP14.12□□□□□ -0.15
KPNA1-210ENST00000494339 UBE2D1P51668 147 aa14.12□□□□□ -0.15
KPNA1-210ENST00000494339 C2orf91Q6ZV80 131 aa14.12□□□□□ -0.15
KPNA1-210ENST00000494339 A0A1B0GUV1 79 aa14.11□□□□□ -0.15
KPNA1-210ENST00000494339 SEC11AP67812 179 aa14.11□□□□□ -0.15
KPNA1-210ENST00000494339 IGKV3OR2-268A0A0C4DH90 116 aa14.1□□□□□ -0.15
KPNA1-210ENST00000494339 FAM19A3Q7Z5A8 133 aa14.1□□□□□ -0.15
KPNA1-210ENST00000494339 WFDC10BQ8IUB3 73 aa14.1□□□□□ -0.15
KPNA1-210ENST00000494339 TRAV13-1A0A0B4J241 112 aa14.09□□□□□ -0.15
KPNA1-210ENST00000494339 TMEM223A0PJW6 202 aa14.09□□□□□ -0.15
KPNA1-210ENST00000494339 EREGO14944 169 aa14.09□□□□□ -0.15
KPNA1-210ENST00000494339 GEMIN7Q9H840 131 aaKnown RBP14.09□□□□□ -0.15
KPNA1-210ENST00000494339 HIGD1BQ9P298 99 aa14.09□□□□□ -0.15
KPNA1-210ENST00000494339 TTTY13Q9BZ97 58 aa14.08□□□□□ -0.16
KPNA1-210ENST00000494339 MYMXA0A1B0GTQ4 84 aa14.07□□□□□ -0.16
KPNA1-210ENST00000494339 ANGP03950 147 aaKnown RBP14.07□□□□□ -0.16
KPNA1-210ENST00000494339 HERVK_113P63121 156 aa14.07□□□□□ -0.16
KPNA1-210ENST00000494339 CLPSL2Q6UWE3 100 aa14.07□□□□□ -0.16
KPNA1-210ENST00000494339 NUPR2A6NF83 97 aa14.06□□□□□ -0.16
KPNA1-210ENST00000494339 IGHV3-30P01768 117 aa14.06□□□□□ -0.16
KPNA1-210ENST00000494339 IGHV3-33P01772 117 aa14.06□□□□□ -0.16
KPNA1-210ENST00000494339 IGHV3-30-3P0DP02 117 aa14.06□□□□□ -0.16
KPNA1-210ENST00000494339 IGHV3-30-5P0DP03 117 aa14.06□□□□□ -0.16
KPNA1-210ENST00000494339 MAPKAPK5-AS1Q8N8E1 139 aa14.06□□□□□ -0.16
KPNA1-210ENST00000494339 IGLV5-45A0A087WSX0 123 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms