RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 POLR2KP53803 58 aaKnown RBP8.34□□□□□ -1.07
UPF3A-210ENST00000493727 TMEM97Q5BJF2 176 aa8.34□□□□□ -1.07
UPF3A-210ENST00000493727 Q8N8P6 123 aa8.34□□□□□ -1.07
UPF3A-210ENST00000493727 DEFB104AQ8WTQ1 72 aa8.34□□□□□ -1.07
UPF3A-210ENST00000493727 GTSF1LQ9H1H1 148 aa8.34□□□□□ -1.07
UPF3A-210ENST00000493727 TRBV27A0A0K0K1C4 114 aa8.33□□□□□ -1.08
UPF3A-210ENST00000493727 TCAPO15273 167 aa8.33□□□□□ -1.08
UPF3A-210ENST00000493727 HIST1H2BKO60814 126 aa8.33□□□□□ -1.08
UPF3A-210ENST00000493727 HIST1H2BJP06899 126 aa8.33□□□□□ -1.08
UPF3A-210ENST00000493727 HIST1H2BOP23527 126 aa8.33□□□□□ -1.08
UPF3A-210ENST00000493727 HIST1H2BBP33778 126 aa8.33□□□□□ -1.08
UPF3A-210ENST00000493727 CCL18P55774 89 aa8.33□□□□□ -1.08
UPF3A-210ENST00000493727 HIST1H2BDP58876 126 aa8.33□□□□□ -1.08
UPF3A-210ENST00000493727 HIST1H2BCP62807 126 aa8.33□□□□□ -1.08
UPF3A-210ENST00000493727 FOXI1Q12951 378 aa8.33□□□□□ -1.08
UPF3A-210ENST00000493727 HIST2H2BEQ16778 126 aa8.33□□□□□ -1.08
UPF3A-210ENST00000493727 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.33□□□□□ -1.08
UPF3A-210ENST00000493727 RNASEKQ6P5S7 137 aaKnown RBP8.33□□□□□ -1.08
UPF3A-210ENST00000493727 HIST1H2BHQ93079 126 aa8.33□□□□□ -1.08
UPF3A-210ENST00000493727 HIST1H2BNQ99877 126 aa8.33□□□□□ -1.08
UPF3A-210ENST00000493727 HIST1H2BMQ99879 126 aa8.33□□□□□ -1.08
UPF3A-210ENST00000493727 PRSS47A8MTI9 375 aa8.32□□□□□ -1.08
UPF3A-210ENST00000493727 AMTP48728 403 aa8.32□□□□□ -1.08
UPF3A-210ENST00000493727 TRBV25-1A0A075B6N4 114 aa8.31□□□□□ -1.08
UPF3A-210ENST00000493727 IGHV1-24A0A0C4DH33 117 aa8.31□□□□□ -1.08
UPF3A-210ENST00000493727 NBDYA0A0U1RRE5 68 aa8.31□□□□□ -1.08
UPF3A-210ENST00000493727 TSHBP01222 138 aa8.31□□□□□ -1.08
UPF3A-210ENST00000493727 Q0VG73 95 aa8.31□□□□□ -1.08
UPF3A-210ENST00000493727 NIT1Q86X76 327 aa8.31□□□□□ -1.08
UPF3A-210ENST00000493727 K7EMI3 77 aa8.3□□□□□ -1.08
UPF3A-210ENST00000493727 UBE2L6O14933 153 aa8.3□□□□□ -1.08
UPF3A-210ENST00000493727 LINC00614P0C842 121 aa8.3□□□□□ -1.08
UPF3A-210ENST00000493727 NDUFA6P56556 154 aa8.3□□□□□ -1.08
UPF3A-210ENST00000493727 TIRAPP58753 221 aa8.3□□□□□ -1.08
UPF3A-210ENST00000493727 LAGE3Q14657 143 aa8.3□□□□□ -1.08
UPF3A-210ENST00000493727 ORMDL2Q53FV1 153 aa8.3□□□□□ -1.08
UPF3A-210ENST00000493727 LYPD5Q6UWN5 251 aa8.3□□□□□ -1.08
UPF3A-210ENST00000493727 C6orf223Q8N319 242 aa8.3□□□□□ -1.08
UPF3A-210ENST00000493727 TMEM243Q9BU79 118 aa8.3□□□□□ -1.08
UPF3A-210ENST00000493727 TRBV6-8A0A0A6YYG3 113 aa8.29□□□□□ -1.08
UPF3A-210ENST00000493727 TRAV8-6A0A0B4J262 113 aa8.29□□□□□ -1.08
UPF3A-210ENST00000493727 HSBP1O75506 76 aa8.29□□□□□ -1.08
UPF3A-210ENST00000493727 SERF1AO75920 110 aa8.29□□□□□ -1.08
UPF3A-210ENST00000493727 CDK2AP2O75956 126 aa8.29□□□□□ -1.08
UPF3A-210ENST00000493727 S100A6P06703 90 aa8.29□□□□□ -1.08
UPF3A-210ENST00000493727 ESRGQ1W209 222 aa8.29□□□□□ -1.08
UPF3A-210ENST00000493727 LELP1Q5T871 98 aa8.29□□□□□ -1.08
UPF3A-210ENST00000493727 CHCHD1Q96BP2 118 aaKnown RBP8.29□□□□□ -1.08
UPF3A-210ENST00000493727 CHCHD5Q9BSY4 110 aa8.29□□□□□ -1.08
UPF3A-210ENST00000493727 FAT1Q14517 4588 aa8.29□□□□□ -1.08
UPF3A-210ENST00000493727 BTF3P20290 206 aaKnown RBP8.28□□□□□ -1.08
UPF3A-210ENST00000493727 TTC32Q5I0X7 151 aa8.28□□□□□ -1.08
UPF3A-210ENST00000493727 NTM-AS1Q6ZSK4 140 aa8.28□□□□□ -1.08
UPF3A-210ENST00000493727 TMEM18Q96B42 140 aa8.28□□□□□ -1.08
UPF3A-210ENST00000493727 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.27□□□□□ -1.09
UPF3A-210ENST00000493727 IGKV2-29A2NJV5 120 aaPredicted RBP8.27□□□□□ -1.09
UPF3A-210ENST00000493727 TMEM262E9PQX1 116 aa8.27□□□□□ -1.09
UPF3A-210ENST00000493727 G0S2P27469 103 aa8.27□□□□□ -1.09
UPF3A-210ENST00000493727 GAGE6Q13070 117 aa8.27□□□□□ -1.09
UPF3A-210ENST00000493727 URB1-AS1Q96HZ7 61 aa8.27□□□□□ -1.09
UPF3A-210ENST00000493727 CHCHD7Q9BUK0 85 aa8.27□□□□□ -1.09
UPF3A-210ENST00000493727 LINC00588Q9Y4M8 146 aa8.27□□□□□ -1.09
UPF3A-210ENST00000493727 LINC01546A6NGU7 62 aa8.26□□□□□ -1.09
UPF3A-210ENST00000493727 C16orf90A8MZG2 172 aa8.26□□□□□ -1.09
UPF3A-210ENST00000493727 PKIAP61925 76 aa8.26□□□□□ -1.09
UPF3A-210ENST00000493727 SMAGPQ0VAQ4 97 aa8.26□□□□□ -1.09
UPF3A-210ENST00000493727 PMCHL1Q16048 86 aa8.26□□□□□ -1.09
UPF3A-210ENST00000493727 KRTAP15-1Q3LI76 137 aa8.26□□□□□ -1.09
UPF3A-210ENST00000493727 AMMECR1LQ6DCA0 310 aa8.26□□□□□ -1.09
UPF3A-210ENST00000493727 MAPKAPK5-AS1Q8N8E1 139 aa8.26□□□□□ -1.09
UPF3A-210ENST00000493727 CYSLTR1Q9Y271 337 aa8.26□□□□□ -1.09
UPF3A-210ENST00000493727 MRPS16Q9Y3D3 137 aaKnown RBP8.26□□□□□ -1.09
UPF3A-210ENST00000493727 DMBT1Q9UGM3 2413 aaPredicted RBP8.26□□□□□ -1.09
UPF3A-210ENST00000493727 HBDP02042 147 aa8.25□□□□□ -1.09
UPF3A-210ENST00000493727 ESDP10768 282 aa8.25□□□□□ -1.09
UPF3A-210ENST00000493727 C2orf66Q6UXQ4 117 aa8.25□□□□□ -1.09
UPF3A-210ENST00000493727 C20orf203Q8NBC4 194 aa8.25□□□□□ -1.09
UPF3A-210ENST00000493727 Q9H8V8 135 aa8.25□□□□□ -1.09
UPF3A-210ENST00000493727 A0A087WX48 190 aa8.24□□□□□ -1.09
UPF3A-210ENST00000493727 H7C423 109 aa8.24□□□□□ -1.09
UPF3A-210ENST00000493727 RPL39P62891 51 aaKnown RBP8.24□□□□□ -1.09
UPF3A-210ENST00000493727 DGAT2L7PQ6IED9 249 aa8.24□□□□□ -1.09
UPF3A-210ENST00000493727 TMEM101Q96IK0 257 aa8.24□□□□□ -1.09
UPF3A-210ENST00000493727 UPK3BQ9BT76 320 aa8.24□□□□□ -1.09
UPF3A-210ENST00000493727 FGF6P10767 208 aa8.23□□□□□ -1.09
UPF3A-210ENST00000493727 PDZD11Q5EBL8 140 aa8.23□□□□□ -1.09
UPF3A-210ENST00000493727 COA6Q5JTJ3 125 aaKnown RBP8.23□□□□□ -1.09
UPF3A-210ENST00000493727 WFDC10BQ8IUB3 73 aa8.23□□□□□ -1.09
UPF3A-210ENST00000493727 FAM19A2Q8N3H0 131 aa8.23□□□□□ -1.09
UPF3A-210ENST00000493727 MYCBP2O75592 4640 aa8.23□□□□□ -1.09
UPF3A-210ENST00000493727 LINC01549A6NIU2 74 aa8.22□□□□□ -1.09
UPF3A-210ENST00000493727 NUPR1O60356 82 aa8.22□□□□□ -1.09
UPF3A-210ENST00000493727 S100A2P29034 98 aa8.22□□□□□ -1.09
UPF3A-210ENST00000493727 OR5A1Q8NGJ0 315 aa8.22□□□□□ -1.09
UPF3A-210ENST00000493727 TOMM6Q96B49 74 aa8.22□□□□□ -1.09
UPF3A-210ENST00000493727 SCGB3A1Q96QR1 104 aa8.22□□□□□ -1.09
UPF3A-210ENST00000493727 SIVA1O15304 175 aa8.21□□□□□ -1.1
UPF3A-210ENST00000493727 IGHV3-30P01768 117 aa8.21□□□□□ -1.1
UPF3A-210ENST00000493727 IGHV3-33P01772 117 aa8.21□□□□□ -1.1
UPF3A-210ENST00000493727 IGHV3-30-3P0DP02 117 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms