RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 RNASE13Q5GAN3 156 aaKnown RBP6.96□□□□□ -1.3
HDAC6-226ENST00000483656 CHTOPQ9Y3Y2 248 aaKnown RBP6.96□□□□□ -1.3
HDAC6-226ENST00000483656 IGLV4-69A0A075B6H9 119 aa6.95□□□□□ -1.3
HDAC6-226ENST00000483656 TRAV9-2A0A087WT02 112 aa6.95□□□□□ -1.3
HDAC6-226ENST00000483656 hDV102S1A0JD36 115 aa6.95□□□□□ -1.3
HDAC6-226ENST00000483656 F8VRH5 84 aa6.95□□□□□ -1.3
HDAC6-226ENST00000483656 LYPD5Q6UWN5 251 aa6.95□□□□□ -1.3
HDAC6-226ENST00000483656 SH2D6Q7Z4S9 175 aa6.95□□□□□ -1.3
HDAC6-226ENST00000483656 ZNF664Q8N3J9 261 aa6.95□□□□□ -1.3
HDAC6-226ENST00000483656 CHCHD5Q9BSY4 110 aa6.95□□□□□ -1.3
HDAC6-226ENST00000483656 KRTAP17-1Q9BYP8 105 aa6.95□□□□□ -1.3
HDAC6-226ENST00000483656 VCX2Q9H322 139 aa6.95□□□□□ -1.3
HDAC6-226ENST00000483656 CDC42SE2Q9NRR3 84 aa6.95□□□□□ -1.3
HDAC6-226ENST00000483656 CSDC2Q9Y534 153 aaKnown RBP6.95□□□□□ -1.3
HDAC6-226ENST00000483656 IGLV4-60A0A075B6I1 120 aa6.94□□□□□ -1.3
HDAC6-226ENST00000483656 DPM2O94777 84 aa6.94□□□□□ -1.3
HDAC6-226ENST00000483656 IGKCP01834 107 aa6.94□□□□□ -1.3
HDAC6-226ENST00000483656 TIRAPP58753 221 aa6.94□□□□□ -1.3
HDAC6-226ENST00000483656 LELP1Q5T871 98 aa6.94□□□□□ -1.3
HDAC6-226ENST00000483656 UBE2L6O14933 153 aa6.93□□□□□ -1.3
HDAC6-226ENST00000483656 S100A12P80511 92 aa6.93□□□□□ -1.3
HDAC6-226ENST00000483656 ESRGQ1W209 222 aa6.93□□□□□ -1.3
HDAC6-226ENST00000483656 PAPPA-AS1Q5QFB9 102 aa6.93□□□□□ -1.3
HDAC6-226ENST00000483656 DGAT2L7PQ6IED9 249 aa6.93□□□□□ -1.3
HDAC6-226ENST00000483656 STPG4Q8N801 248 aa6.93□□□□□ -1.3
HDAC6-226ENST00000483656 OR5A1Q8NGJ0 315 aa6.93□□□□□ -1.3
HDAC6-226ENST00000483656 VAMP8Q9BV40 100 aa6.93□□□□□ -1.3
HDAC6-226ENST00000483656 PAM16Q9Y3D7 125 aa6.93□□□□□ -1.3
HDAC6-226ENST00000483656 A0A0J9YXV3 536 aa6.92□□□□□ -1.3
HDAC6-226ENST00000483656 C11orf86A6NJI1 115 aa6.92□□□□□ -1.3
HDAC6-226ENST00000483656 IGLC3P0DOY3 106 aa6.92□□□□□ -1.3
HDAC6-226ENST00000483656 ZNF25P17030 456 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-226ENST00000483656 RBX1P62877 108 aa6.92□□□□□ -1.3
HDAC6-226ENST00000483656 SPATA45Q537H7 98 aa6.92□□□□□ -1.3
HDAC6-226ENST00000483656 ANKRD39Q53RE8 183 aa6.92□□□□□ -1.3
HDAC6-226ENST00000483656 MPV17L2Q567V2 206 aa6.92□□□□□ -1.3
HDAC6-226ENST00000483656 AMMECR1LQ6DCA0 310 aa6.92□□□□□ -1.3
HDAC6-226ENST00000483656 NFE4Q86UQ8 179 aa6.92□□□□□ -1.3
HDAC6-226ENST00000483656 Q8N3U1 123 aa6.92□□□□□ -1.3
HDAC6-226ENST00000483656 PRO1933Q9H354 126 aa6.92□□□□□ -1.3
HDAC6-226ENST00000483656 PLECQ15149 4684 aaKnown RBP6.92□□□□□ -1.3
HDAC6-226ENST00000483656 A0A1B0GUV1 79 aa6.91□□□□□ -1.3
HDAC6-226ENST00000483656 PLNP26678 52 aa6.91□□□□□ -1.3
HDAC6-226ENST00000483656 UBE2D1P51668 147 aa6.91□□□□□ -1.3
HDAC6-226ENST00000483656 SMAGPQ0VAQ4 97 aa6.91□□□□□ -1.3
HDAC6-226ENST00000483656 TMEM101Q96IK0 257 aa6.91□□□□□ -1.3
HDAC6-226ENST00000483656 TMEM262E9PQX1 116 aa6.9□□□□□ -1.3
HDAC6-226ENST00000483656 FAM19A3Q7Z5A8 133 aa6.9□□□□□ -1.3
HDAC6-226ENST00000483656 C15orf53Q8NAA6 179 aa6.9□□□□□ -1.3
HDAC6-226ENST00000483656 IGLL5B9A064 214 aa6.89□□□□□ -1.31
HDAC6-226ENST00000483656 ZNF22P17026 224 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-226ENST00000483656 TCTAP57738 103 aa6.89□□□□□ -1.31
HDAC6-226ENST00000483656 PKIAP61925 76 aa6.89□□□□□ -1.31
HDAC6-226ENST00000483656 COX6A2Q02221 97 aa6.89□□□□□ -1.31
HDAC6-226ENST00000483656 WFDC10BQ8IUB3 73 aa6.89□□□□□ -1.31
HDAC6-226ENST00000483656 C2orf88Q9BSF0 95 aa6.89□□□□□ -1.31
HDAC6-226ENST00000483656 CHAC1Q9BUX1 264 aa6.89□□□□□ -1.31
HDAC6-226ENST00000483656 VPS13DQ5THJ4 4388 aa6.89□□□□□ -1.31
HDAC6-226ENST00000483656 IGKV2D-26A0A0A0MRZ7 120 aa6.88□□□□□ -1.31
HDAC6-226ENST00000483656 TINCRA0A1B0GVN0 87 aa6.88□□□□□ -1.31
HDAC6-226ENST00000483656 LINC00242Q5T6M2 205 aa6.88□□□□□ -1.31
HDAC6-226ENST00000483656 DNAH1Q9P2D7 4330 aa6.88□□□□□ -1.31
HDAC6-226ENST00000483656 CSMD3Q7Z407 3707 aa6.87□□□□□ -1.31
HDAC6-226ENST00000483656 TRAV13-1A0A0B4J241 112 aa6.87□□□□□ -1.31
HDAC6-226ENST00000483656 TRAV8-6A0A0B4J262 113 aa6.87□□□□□ -1.31
HDAC6-226ENST00000483656 HSBP1L1C9JCN9 74 aa6.87□□□□□ -1.31
HDAC6-226ENST00000483656 C14orf144Q96I85 54 aa6.87□□□□□ -1.31
HDAC6-226ENST00000483656 TP73-AS1Q9UF72 201 aa6.87□□□□□ -1.31
HDAC6-226ENST00000483656 APLNQ9ULZ1 77 aa6.87□□□□□ -1.31
HDAC6-226ENST00000483656 LINC00588Q9Y4M8 146 aa6.87□□□□□ -1.31
HDAC6-226ENST00000483656 IGLV5-45A0A087WSX0 123 aa6.86□□□□□ -1.31
HDAC6-226ENST00000483656 IGKV3OR2-268A0A0C4DH90 116 aa6.86□□□□□ -1.31
HDAC6-226ENST00000483656 LINC00959A0A1B0GUT2 108 aa6.86□□□□□ -1.31
HDAC6-226ENST00000483656 TMEM223A0PJW6 202 aa6.86□□□□□ -1.31
HDAC6-226ENST00000483656 PCP4L1A6NKN8 68 aa6.86□□□□□ -1.31
HDAC6-226ENST00000483656 TMEM170BQ5T4T1 132 aa6.86□□□□□ -1.31
HDAC6-226ENST00000483656 STARD9Q9P2P6 4700 aa6.86□□□□□ -1.31
HDAC6-226ENST00000483656 E9PLD3 99 aa6.85□□□□□ -1.31
HDAC6-226ENST00000483656 IGHV3-30P01768 117 aa6.85□□□□□ -1.31
HDAC6-226ENST00000483656 IGHV3-33P01772 117 aa6.85□□□□□ -1.31
HDAC6-226ENST00000483656 IGHV3-30-3P0DP02 117 aa6.85□□□□□ -1.31
HDAC6-226ENST00000483656 IGHV3-30-5P0DP03 117 aa6.85□□□□□ -1.31
HDAC6-226ENST00000483656 COX8AP10176 69 aa6.85□□□□□ -1.31
HDAC6-226ENST00000483656 CLPSL2Q6UWE3 100 aa6.85□□□□□ -1.31
HDAC6-226ENST00000483656 PCP2Q8IVA1 136 aa6.85□□□□□ -1.31
HDAC6-226ENST00000483656 LINC00269Q8N2A0 174 aa6.85□□□□□ -1.31
HDAC6-226ENST00000483656 TTTY13Q9BZ97 58 aa6.85□□□□□ -1.31
HDAC6-226ENST00000483656 CDKN2A-AS1Q9UH64 79 aa6.85□□□□□ -1.31
HDAC6-226ENST00000483656 MRPS16Q9Y3D3 137 aaKnown RBP6.85□□□□□ -1.31
HDAC6-226ENST00000483656 TSTD3H0UI37 97 aa6.84□□□□□ -1.31
HDAC6-226ENST00000483656 ANGP03950 147 aaKnown RBP6.84□□□□□ -1.31
HDAC6-226ENST00000483656 TSPEAR-AS2P59090 65 aa6.84□□□□□ -1.31
HDAC6-226ENST00000483656 HERVK_113P63121 156 aa6.84□□□□□ -1.31
HDAC6-226ENST00000483656 ENHOQ6UWT2 76 aa6.84□□□□□ -1.31
HDAC6-226ENST00000483656 LINC00469Q8N7U9 141 aa6.84□□□□□ -1.31
HDAC6-226ENST00000483656 MAPKAPK5-AS1Q8N8E1 139 aa6.84□□□□□ -1.31
HDAC6-226ENST00000483656 MIEN1Q9BRT3 115 aa6.84□□□□□ -1.31
HDAC6-226ENST00000483656 GEMIN7Q9H840 131 aaKnown RBP6.84□□□□□ -1.31
HDAC6-226ENST00000483656 PRR34Q9NV39 138 aa6.84□□□□□ -1.31
HDAC6-226ENST00000483656 KLK12Q9UKR0 248 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms