RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 C9orf85Q96MD7 179 aa11.17□□□□□ -0.62
DDR1-244ENST00000482873 LINC01587Q99440 93 aa11.17□□□□□ -0.62
DDR1-244ENST00000482873 Q96MF0 132 aa11.16□□□□□ -0.62
DDR1-244ENST00000482873 LITAFQ99732 161 aa11.16□□□□□ -0.62
DDR1-244ENST00000482873 Q9UF83 564 aa11.16□□□□□ -0.62
DDR1-244ENST00000482873 TRBV30A0A0K0K1B3 111 aa11.16□□□□□ -0.62
DDR1-244ENST00000482873 TRBV10-2A0A0K0K1G8 114 aa11.16□□□□□ -0.62
DDR1-244ENST00000482873 IGHV3-30-3P0DP02 117 aa11.16□□□□□ -0.62
DDR1-244ENST00000482873 RPL13AP40429 203 aaKnown RBP11.16□□□□□ -0.62
DDR1-244ENST00000482873 IGHV1OR15-1A0A075B7D0 117 aa11.15□□□□□ -0.62
DDR1-244ENST00000482873 Q6YL49 198 aa11.15□□□□□ -0.62
DDR1-244ENST00000482873 TRAV8-3A0A0A6YYJ7 113 aa11.15□□□□□ -0.62
DDR1-244ENST00000482873 TRAV8-4A0A0B4J246 113 aa11.15□□□□□ -0.62
DDR1-244ENST00000482873 PRSS2P07478 247 aa11.15□□□□□ -0.62
DDR1-244ENST00000482873 ADAMTSL4-AS1Q5T5F5 129 aa11.14□□□□□ -0.63
DDR1-244ENST00000482873 Q6ZSV7 163 aa11.14□□□□□ -0.63
DDR1-244ENST00000482873 LINC01600Q96MT4 127 aa11.14□□□□□ -0.63
DDR1-244ENST00000482873 CR1P17927 2039 aa11.14□□□□□ -0.63
DDR1-244ENST00000482873 A0A1W2PRX2 142 aa11.14□□□□□ -0.63
DDR1-244ENST00000482873 C15orf53Q8NAA6 179 aa11.14□□□□□ -0.63
DDR1-244ENST00000482873 H3BMM0 161 aa11.13□□□□□ -0.63
DDR1-244ENST00000482873 I3L3M4 83 aa11.13□□□□□ -0.63
DDR1-244ENST00000482873 FAM104AQ969W3 186 aa11.13□□□□□ -0.63
DDR1-244ENST00000482873 UBE2WQ96B02 151 aa11.13□□□□□ -0.63
DDR1-244ENST00000482873 ITPR2Q14571 2701 aa11.13□□□□□ -0.63
DDR1-244ENST00000482873 H7C423 109 aa11.12□□□□□ -0.63
DDR1-244ENST00000482873 LINC00694P0DN24 101 aa11.12□□□□□ -0.63
DDR1-244ENST00000482873 CEMP1Q6PRD7 247 aaPredicted RBP11.12□□□□□ -0.63
DDR1-244ENST00000482873 C2orf82Q6UX34 121 aa11.12□□□□□ -0.63
DDR1-244ENST00000482873 TIMM21Q9BVV7 248 aa11.12□□□□□ -0.63
DDR1-244ENST00000482873 NPC2P61916 151 aa11.12□□□□□ -0.63
DDR1-244ENST00000482873 RNASE13Q5GAN3 156 aaKnown RBP11.12□□□□□ -0.63
DDR1-244ENST00000482873 TMEM61Q8N0U2 210 aa11.12□□□□□ -0.63
DDR1-244ENST00000482873 LRRC75A-AS1Q8N1F1 130 aa11.12□□□□□ -0.63
DDR1-244ENST00000482873 ICOSQ9Y6W8 199 aa11.12□□□□□ -0.63
DDR1-244ENST00000482873 A8MZ25 164 aa11.12□□□□□ -0.63
DDR1-244ENST00000482873 UBE2E2Q96LR5 201 aa11.12□□□□□ -0.63
DDR1-244ENST00000482873 CLEC2BQ92478 149 aa11.11□□□□□ -0.63
DDR1-244ENST00000482873 RBMY1BA6NDE4 496 aaKnown RBP11.1□□□□□ -0.63
DDR1-244ENST00000482873 RBMY1EA6NEQ0 496 aaKnown RBP11.1□□□□□ -0.63
DDR1-244ENST00000482873 J3QLI3 93 aa11.1□□□□□ -0.63
DDR1-244ENST00000482873 RBMY1DP0C7P1 496 aaKnown RBP11.1□□□□□ -0.63
DDR1-244ENST00000482873 CD28P10747 220 aa11.1□□□□□ -0.63
DDR1-244ENST00000482873 IGHV3OR16-12A0A075B7B8 117 aa11.1□□□□□ -0.63
DDR1-244ENST00000482873 FAM19A5Q7Z5A7 132 aaPredicted RBP11.1□□□□□ -0.63
DDR1-244ENST00000482873 MRPS36P82909 103 aaKnown RBP11.09□□□□□ -0.63
DDR1-244ENST00000482873 DEFB113Q30KQ7 82 aa11.09□□□□□ -0.63
DDR1-244ENST00000482873 NDUFA12Q9UI09 145 aa11.09□□□□□ -0.63
DDR1-244ENST00000482873 NOTCH2Q04721 2471 aa11.08□□□□□ -0.64
DDR1-244ENST00000482873 IGHV1-58A0A0C4DH39 117 aa11.08□□□□□ -0.64
DDR1-244ENST00000482873 LOC107984640A0A0U1RRK4 108 aa11.08□□□□□ -0.64
DDR1-244ENST00000482873 WFDC11Q8NEX6 87 aa11.08□□□□□ -0.64
DDR1-244ENST00000482873 A0A1B0GX51 115 aa11.07□□□□□ -0.64
DDR1-244ENST00000482873 IGHV3-38A0A0C4DH36 116 aa11.07□□□□□ -0.64
DDR1-244ENST00000482873 J3KT08 172 aa11.07□□□□□ -0.64
DDR1-244ENST00000482873 FSHBP01225 129 aa11.07□□□□□ -0.64
DDR1-244ENST00000482873 Q6ZSN1 163 aa11.07□□□□□ -0.64
DDR1-244ENST00000482873 SPANXDQ9BXN6 97 aa11.07□□□□□ -0.64
DDR1-244ENST00000482873 SPANXCQ9NY87 97 aa11.07□□□□□ -0.64
DDR1-244ENST00000482873 H3BT86 120 aa11.06□□□□□ -0.64
DDR1-244ENST00000482873 MIAQ16674 131 aa11.06□□□□□ -0.64
DDR1-244ENST00000482873 PYGO1Q9Y3Y4 419 aa11.06□□□□□ -0.64
DDR1-244ENST00000482873 SETXQ7Z333 2677 aaKnown RBP11.06□□□□□ -0.64
DDR1-244ENST00000482873 COX6CP09669 75 aa11.06□□□□□ -0.64
DDR1-244ENST00000482873 DYNLRB2Q8TF09 96 aa11.05□□□□□ -0.64
DDR1-244ENST00000482873 VSIG2Q96IQ7 327 aa11.05□□□□□ -0.64
DDR1-244ENST00000482873 HECTD1Q9ULT8 2610 aa11.05□□□□□ -0.64
DDR1-244ENST00000482873 LST1O00453 97 aa11.05□□□□□ -0.64
DDR1-244ENST00000482873 C3orf56Q8N813 242 aa11.05□□□□□ -0.64
DDR1-244ENST00000482873 DAND5Q8N907 189 aa11.05□□□□□ -0.64
DDR1-244ENST00000482873 TMEM101Q96IK0 257 aa11.05□□□□□ -0.64
DDR1-244ENST00000482873 RPS28P62857 69 aaKnown RBP11.04□□□□□ -0.64
DDR1-244ENST00000482873 OR13C6PQ8NH95 151 aa11.04□□□□□ -0.64
DDR1-244ENST00000482873 XCL2Q9UBD3 114 aa11.04□□□□□ -0.64
DDR1-244ENST00000482873 TMEM89A2RUT3 159 aa11.04□□□□□ -0.64
DDR1-244ENST00000482873 MRPL23Q16540 153 aaKnown RBP11.03□□□□□ -0.64
DDR1-244ENST00000482873 GCN1Q92616 2671 aaKnown RBP11.03□□□□□ -0.64
DDR1-244ENST00000482873 TRGV11A0A075B6L2 103 aa11.02□□□□□ -0.65
DDR1-244ENST00000482873 NDUFA7O95182 113 aa11.02□□□□□ -0.65
DDR1-244ENST00000482873 MAP6D1Q9H9H5 199 aa11.02□□□□□ -0.65
DDR1-244ENST00000482873 TINCRA0A1B0GVN0 87 aa11.02□□□□□ -0.65
DDR1-244ENST00000482873 CHCHD5Q9BSY4 110 aa11.02□□□□□ -0.65
DDR1-244ENST00000482873 FASNP49327 2511 aaKnown RBP11.01□□□□□ -0.65
DDR1-244ENST00000482873 FAM240AA0A1B0GVK7 77 aa11.01□□□□□ -0.65
DDR1-244ENST00000482873 KRTAP1-3Q8IUG1 177 aa11.01□□□□□ -0.65
DDR1-244ENST00000482873 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.01□□□□□ -0.65
DDR1-244ENST00000482873 IGKV2-29A2NJV5 120 aaPredicted RBP11.01□□□□□ -0.65
DDR1-244ENST00000482873 DEFB121Q5J5C9 76 aa11.01□□□□□ -0.65
DDR1-244ENST00000482873 F5H768 121 aa11□□□□□ -0.65
DDR1-244ENST00000482873 CHCHD7Q9BUK0 85 aa11□□□□□ -0.65
DDR1-244ENST00000482873 UBE2D4Q9Y2X8 147 aa11□□□□□ -0.65
DDR1-244ENST00000482873 FN1P02751 2386 aaKnown RBP11□□□□□ -0.65
DDR1-244ENST00000482873 IGHV3-53P01767 116 aa10.99□□□□□ -0.65
DDR1-244ENST00000482873 DEFB114Q30KQ6 69 aa10.99□□□□□ -0.65
DDR1-244ENST00000482873 RNF152Q8N8N0 203 aa10.99□□□□□ -0.65
DDR1-244ENST00000482873 ESM1Q9NQ30 184 aa10.99□□□□□ -0.65
DDR1-244ENST00000482873 CDKN2A-AS1Q9UH64 79 aa10.99□□□□□ -0.65
DDR1-244ENST00000482873 EDA2RQ9HAV5 297 aa10.98□□□□□ -0.65
DDR1-244ENST00000482873 PEMTQ9UBM1 199 aa10.98□□□□□ -0.65
DDR1-244ENST00000482873 KMT2BQ9UMN6 2715 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms