RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 CAMPP49913 170 aa8.09□□□□□ -1.11
NDC1-202ENST00000480952 PHF5AQ7RTV0 110 aaKnown RBP8.09□□□□□ -1.11
NDC1-202ENST00000480952 OR2D3Q8NGH3 330 aa8.09□□□□□ -1.11
NDC1-202ENST00000480952 MED9Q9NWA0 146 aa8.09□□□□□ -1.11
NDC1-202ENST00000480952 F2Z2F3 143 aa8.08□□□□□ -1.12
NDC1-202ENST00000480952 NCR2O95944 276 aa8.08□□□□□ -1.12
NDC1-202ENST00000480952 APCSP02743 223 aa8.08□□□□□ -1.12
NDC1-202ENST00000480952 RPL35P42766 123 aaKnown RBP8.08□□□□□ -1.12
NDC1-202ENST00000480952 C11orf52Q96A22 123 aa8.08□□□□□ -1.12
NDC1-202ENST00000480952 TMEM101Q96IK0 257 aa8.08□□□□□ -1.12
NDC1-202ENST00000480952 BTF3L4Q96K17 158 aa8.08□□□□□ -1.12
NDC1-202ENST00000480952 IGLV4-69A0A075B6H9 119 aa8.07□□□□□ -1.12
NDC1-202ENST00000480952 H0Y9J4 135 aa8.07□□□□□ -1.12
NDC1-202ENST00000480952 ZNF25P17030 456 aaPredicted RBP8.07□□□□□ -1.12
NDC1-202ENST00000480952 UBE2D1P51668 147 aa8.07□□□□□ -1.12
NDC1-202ENST00000480952 SS18Q15532 418 aa8.07□□□□□ -1.12
NDC1-202ENST00000480952 LYZL1Q6UWQ5 148 aa8.07□□□□□ -1.12
NDC1-202ENST00000480952 A0A087WZ39 114 aa8.06□□□□□ -1.12
NDC1-202ENST00000480952 XKRY2A2RUG3 117 aa8.06□□□□□ -1.12
NDC1-202ENST00000480952 APOMO95445 188 aa8.06□□□□□ -1.12
NDC1-202ENST00000480952 GNG4P50150 75 aa8.06□□□□□ -1.12
NDC1-202ENST00000480952 TEX261Q6UWH6 196 aa8.06□□□□□ -1.12
NDC1-202ENST00000480952 CD164L2Q6UWJ8 174 aa8.06□□□□□ -1.12
NDC1-202ENST00000480952 GATD1Q8NB37 220 aa8.06□□□□□ -1.12
NDC1-202ENST00000480952 EIF5A2Q9GZV4 153 aaKnown RBP8.06□□□□□ -1.12
NDC1-202ENST00000480952 MALP21145 153 aa8.05□□□□□ -1.12
NDC1-202ENST00000480952 RPL18AQ02543 176 aaKnown RBP8.05□□□□□ -1.12
NDC1-202ENST00000480952 CENPWQ5EE01 88 aa8.05□□□□□ -1.12
NDC1-202ENST00000480952 NUP35Q8NFH5 326 aa8.05□□□□□ -1.12
NDC1-202ENST00000480952 CAMK2N2Q96S95 79 aa8.05□□□□□ -1.12
NDC1-202ENST00000480952 RAB19A4D1S5 217 aa8.04□□□□□ -1.12
NDC1-202ENST00000480952 CEBPGP53567 150 aa8.04□□□□□ -1.12
NDC1-202ENST00000480952 TWIST1Q15672 202 aa8.04□□□□□ -1.12
NDC1-202ENST00000480952 RPL39LQ96EH5 51 aaKnown RBP8.04□□□□□ -1.12
NDC1-202ENST00000480952 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.03□□□□□ -1.12
NDC1-202ENST00000480952 RPL13AP40429 203 aaKnown RBP8.03□□□□□ -1.12
NDC1-202ENST00000480952 TSKUQ8WUA8 353 aa8.03□□□□□ -1.12
NDC1-202ENST00000480952 C19orf71A6NCJ1 209 aa8.02□□□□□ -1.13
NDC1-202ENST00000480952 SDHAF1A6NFY7 115 aa8.02□□□□□ -1.13
NDC1-202ENST00000480952 TMEM250H0YL14 139 aa8.02□□□□□ -1.13
NDC1-202ENST00000480952 KRTAP1-4P0C5Y4 121 aa8.02□□□□□ -1.13
NDC1-202ENST00000480952 PMCHP20382 165 aa8.02□□□□□ -1.13
NDC1-202ENST00000480952 SMIM12Q96EX1 92 aa8.02□□□□□ -1.13
NDC1-202ENST00000480952 FAM210AQ96ND0 272 aa8.02□□□□□ -1.13
NDC1-202ENST00000480952 OPRPNQ99935 248 aaPredicted RBP8.02□□□□□ -1.13
NDC1-202ENST00000480952 BIN3Q9NQY0 253 aa8.02□□□□□ -1.13
NDC1-202ENST00000480952 I3L3M4 83 aa8.01□□□□□ -1.13
NDC1-202ENST00000480952 COX7A2LO14548 114 aa8.01□□□□□ -1.13
NDC1-202ENST00000480952 CDC42SE2Q9NRR3 84 aa8.01□□□□□ -1.13
NDC1-202ENST00000480952 TRBV20OR9-2A0A075B6H5 130 aa8□□□□□ -1.13
NDC1-202ENST00000480952 TSPAN13O95857 204 aa8□□□□□ -1.13
NDC1-202ENST00000480952 C2orf48Q96LS8 159 aa8□□□□□ -1.13
NDC1-202ENST00000480952 C1orf196B1AJZ1 125 aa7.99□□□□□ -1.13
NDC1-202ENST00000480952 CTRLP40313 264 aa7.99□□□□□ -1.13
NDC1-202ENST00000480952 RAB14P61106 215 aa7.99□□□□□ -1.13
NDC1-202ENST00000480952 SMIM15Q7Z3B0 74 aa7.99□□□□□ -1.13
NDC1-202ENST00000480952 KRTAP11-1Q8IUC1 163 aa7.99□□□□□ -1.13
NDC1-202ENST00000480952 MRAP2Q96G30 205 aa7.99□□□□□ -1.13
NDC1-202ENST00000480952 FSIP2Q5CZC0 6907 aa7.99□□□□□ -1.13
NDC1-202ENST00000480952 ESDP10768 282 aa7.98□□□□□ -1.13
NDC1-202ENST00000480952 OCC1Q8TAD7 63 aa7.98□□□□□ -1.13
NDC1-202ENST00000480952 SMIM7Q9BQ49 75 aa7.98□□□□□ -1.13
NDC1-202ENST00000480952 FAM168BA1KXE4 195 aa7.97□□□□□ -1.13
NDC1-202ENST00000480952 ZNF727A8MUV8 499 aa7.97□□□□□ -1.13
NDC1-202ENST00000480952 SRP19P09132 144 aaKnown RBP7.97□□□□□ -1.13
NDC1-202ENST00000480952 FOXA3P55318 350 aaPredicted RBP7.97□□□□□ -1.13
NDC1-202ENST00000480952 PEA15Q15121 130 aa7.97□□□□□ -1.13
NDC1-202ENST00000480952 RNF151Q2KHN1 245 aa7.97□□□□□ -1.13
NDC1-202ENST00000480952 MRPL52Q86TS9 123 aaKnown RBP7.97□□□□□ -1.13
NDC1-202ENST00000480952 CNFNQ9BYD5 112 aa7.97□□□□□ -1.13
NDC1-202ENST00000480952 CARHSP1Q9Y2V2 147 aaKnown RBP7.97□□□□□ -1.13
NDC1-202ENST00000480952 TSHBP01222 138 aa7.96□□□□□ -1.14
NDC1-202ENST00000480952 SPAG11BQ08648 103 aa7.96□□□□□ -1.14
NDC1-202ENST00000480952 FAM19A5Q7Z5A7 132 aaPredicted RBP7.96□□□□□ -1.14
NDC1-202ENST00000480952 C5orf38Q86SI9 138 aa7.96□□□□□ -1.14
NDC1-202ENST00000480952 NUDT10Q8NFP7 164 aa7.96□□□□□ -1.14
NDC1-202ENST00000480952 NUDT11Q96G61 164 aa7.96□□□□□ -1.14
NDC1-202ENST00000480952 TMEM242Q9NWH2 141 aa7.96□□□□□ -1.14
NDC1-202ENST00000480952 K7EN84 100 aa7.95□□□□□ -1.14
NDC1-202ENST00000480952 UBE2BP63146 152 aa7.95□□□□□ -1.14
NDC1-202ENST00000480952 LCE2CQ5TA81 110 aa7.95□□□□□ -1.14
NDC1-202ENST00000480952 IMMP2LQ96T52 175 aa7.95□□□□□ -1.14
NDC1-202ENST00000480952 RNASE7Q9H1E1 156 aaKnown RBP7.95□□□□□ -1.14
NDC1-202ENST00000480952 ST20Q9HBF5 79 aa7.95□□□□□ -1.14
NDC1-202ENST00000480952 TRAV13-1A0A0B4J241 112 aa7.94□□□□□ -1.14
NDC1-202ENST00000480952 TRBV6-5A0A0K0K1A5 114 aa7.94□□□□□ -1.14
NDC1-202ENST00000480952 SMDT1Q9H4I9 107 aa7.94□□□□□ -1.14
NDC1-202ENST00000480952 RPP21Q9H633 154 aaKnown RBP7.94□□□□□ -1.14
NDC1-202ENST00000480952 C7orf77A4D0Y5 90 aa7.93□□□□□ -1.14
NDC1-202ENST00000480952 GATCO43716 136 aaKnown RBP7.93□□□□□ -1.14
NDC1-202ENST00000480952 FAM74A3Q4VXF1 159 aa7.93□□□□□ -1.14
NDC1-202ENST00000480952 MRPL35Q9NZE8 188 aaKnown RBP7.93□□□□□ -1.14
NDC1-202ENST00000480952 SRSF3P84103 164 aaKnown RBP7.92□□□□□ -1.14
NDC1-202ENST00000480952 TMEM241Q24JQ0 296 aa7.92□□□□□ -1.14
NDC1-202ENST00000480952 GAGE2EQ4V326 116 aa7.92□□□□□ -1.14
NDC1-202ENST00000480952 RNASE13Q5GAN3 156 aaKnown RBP7.92□□□□□ -1.14
NDC1-202ENST00000480952 LINC01551Q86U37 167 aa7.92□□□□□ -1.14
NDC1-202ENST00000480952 GAGE2DQ9UEU5 116 aa7.92□□□□□ -1.14
NDC1-202ENST00000480952 MUC17Q685J3 4493 aa7.92□□□□□ -1.14
NDC1-202ENST00000480952 C9JQL5 133 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms