RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 VCYO14598 125 aa6.87□□□□□ -1.31
SEC13-214ENST00000476597 FOXI1Q12951 378 aa6.87□□□□□ -1.31
SEC13-214ENST00000476597 DPH3Q96FX2 82 aa6.87□□□□□ -1.31
SEC13-214ENST00000476597 CDC42SE2Q9NRR3 84 aa6.87□□□□□ -1.31
SEC13-214ENST00000476597 NAT8BQ9UHF3 227 aa6.87□□□□□ -1.31
SEC13-214ENST00000476597 A0A087WYN8 130 aa6.86□□□□□ -1.31
SEC13-214ENST00000476597 SMKR1H3BMG3 65 aa6.86□□□□□ -1.31
SEC13-214ENST00000476597 PPP1R17O96001 155 aa6.86□□□□□ -1.31
SEC13-214ENST00000476597 HNRNPA3P51991 378 aaKnown RBP6.86□□□□□ -1.31
SEC13-214ENST00000476597 SRSF3P84103 164 aaKnown RBP6.86□□□□□ -1.31
SEC13-214ENST00000476597 HIGD2BQ4VC39 106 aa6.86□□□□□ -1.31
SEC13-214ENST00000476597 MRPL52Q86TS9 123 aaKnown RBP6.86□□□□□ -1.31
SEC13-214ENST00000476597 NAT8Q9UHE5 227 aa6.86□□□□□ -1.31
SEC13-214ENST00000476597 GVQW2A0A096LPI5 108 aaPredicted RBP6.85□□□□□ -1.31
SEC13-214ENST00000476597 SMIM27A0A1W2PRY6 76 aa6.85□□□□□ -1.31
SEC13-214ENST00000476597 CCL25O15444 150 aa6.85□□□□□ -1.31
SEC13-214ENST00000476597 CHTF8P0CG12 524 aa6.85□□□□□ -1.31
SEC13-214ENST00000476597 XCL1P47992 114 aa6.85□□□□□ -1.31
SEC13-214ENST00000476597 COX6A2Q02221 97 aa6.85□□□□□ -1.31
SEC13-214ENST00000476597 PEA15Q15121 130 aa6.85□□□□□ -1.31
SEC13-214ENST00000476597 FAM104BQ5XKR9 115 aa6.85□□□□□ -1.31
SEC13-214ENST00000476597 NRACQ8N912 160 aa6.85□□□□□ -1.31
SEC13-214ENST00000476597 SPACA4Q8TDM5 124 aa6.85□□□□□ -1.31
SEC13-214ENST00000476597 SMDT1Q9H4I9 107 aa6.85□□□□□ -1.31
SEC13-214ENST00000476597 C7orf77A4D0Y5 90 aa6.84□□□□□ -1.31
SEC13-214ENST00000476597 SUMO2P61956 95 aaKnown RBP6.84□□□□□ -1.31
SEC13-214ENST00000476597 SS18Q15532 418 aa6.84□□□□□ -1.31
SEC13-214ENST00000476597 ADIRFQ15847 76 aa6.84□□□□□ -1.31
SEC13-214ENST00000476597 CD164L2Q6UWJ8 174 aa6.84□□□□□ -1.31
SEC13-214ENST00000476597 ZNF664Q8N3J9 261 aa6.84□□□□□ -1.31
SEC13-214ENST00000476597 PRSS3P2Q8NHM4 247 aa6.84□□□□□ -1.31
SEC13-214ENST00000476597 PLAC8Q9NZF1 115 aa6.84□□□□□ -1.31
SEC13-214ENST00000476597 IGHV1-58A0A0C4DH39 117 aa6.83□□□□□ -1.32
SEC13-214ENST00000476597 A0A1B0GW15 77 aa6.83□□□□□ -1.32
SEC13-214ENST00000476597 LINC00862A6NCI5 91 aa6.83□□□□□ -1.32
SEC13-214ENST00000476597 FCER1GP30273 86 aa6.83□□□□□ -1.32
SEC13-214ENST00000476597 MRPL51Q4U2R6 128 aaKnown RBP6.83□□□□□ -1.32
SEC13-214ENST00000476597 CSDC2Q9Y534 153 aaKnown RBP6.83□□□□□ -1.32
SEC13-214ENST00000476597 TRBV24-1A0A075B6N3 115 aa6.82□□□□□ -1.32
SEC13-214ENST00000476597 PPP1R2P9O14990 202 aa6.82□□□□□ -1.32
SEC13-214ENST00000476597 CAMPP49913 170 aa6.82□□□□□ -1.32
SEC13-214ENST00000476597 KIR2DL4Q99706 377 aa6.82□□□□□ -1.32
SEC13-214ENST00000476597 C20orf78Q9BR46 151 aa6.82□□□□□ -1.32
SEC13-214ENST00000476597 UBE2D4Q9Y2X8 147 aa6.82□□□□□ -1.32
SEC13-214ENST00000476597 RPL32P62910 135 aaKnown RBP6.81□□□□□ -1.32
SEC13-214ENST00000476597 SMAGPQ0VAQ4 97 aa6.81□□□□□ -1.32
SEC13-214ENST00000476597 MAJINQ3KP22 176 aa6.81□□□□□ -1.32
SEC13-214ENST00000476597 SERTAD4-AS1Q5TG53 156 aa6.81□□□□□ -1.32
SEC13-214ENST00000476597 LINC00526Q96FQ7 95 aa6.81□□□□□ -1.32
SEC13-214ENST00000476597 IGKV2-24A0A0C4DH68 120 aa6.8□□□□□ -1.32
SEC13-214ENST00000476597 C1orf196B1AJZ1 125 aa6.8□□□□□ -1.32
SEC13-214ENST00000476597 CKS2P33552 79 aa6.8□□□□□ -1.32
SEC13-214ENST00000476597 Q6ZRU5 148 aa6.8□□□□□ -1.32
SEC13-214ENST00000476597 TIMM21Q9BVV7 248 aa6.8□□□□□ -1.32
SEC13-214ENST00000476597 A0A096LNI7 61 aa6.79□□□□□ -1.32
SEC13-214ENST00000476597 A0A1B0GXF2 115 aa6.79□□□□□ -1.32
SEC13-214ENST00000476597 ZNF561-AS1K7EIQ3 104 aa6.79□□□□□ -1.32
SEC13-214ENST00000476597 PHOX2AO14813 284 aa6.79□□□□□ -1.32
SEC13-214ENST00000476597 TNFRSF6BO95407 300 aa6.79□□□□□ -1.32
SEC13-214ENST00000476597 STPG4Q8N801 248 aa6.79□□□□□ -1.32
SEC13-214ENST00000476597 C7orf33Q8WU49 177 aa6.79□□□□□ -1.32
SEC13-214ENST00000476597 TMEM18Q96B42 140 aa6.79□□□□□ -1.32
SEC13-214ENST00000476597 TNXBP22105 4242 aa6.78□□□□□ -1.32
SEC13-214ENST00000476597 F8W036 122 aa6.78□□□□□ -1.32
SEC13-214ENST00000476597 COX7A2LO14548 114 aa6.78□□□□□ -1.32
SEC13-214ENST00000476597 TCAPO15273 167 aa6.78□□□□□ -1.32
SEC13-214ENST00000476597 S100A8P05109 93 aa6.78□□□□□ -1.32
SEC13-214ENST00000476597 HBBP68871 147 aa6.78□□□□□ -1.32
SEC13-214ENST00000476597 SYCNQ0VAF6 134 aa6.78□□□□□ -1.32
SEC13-214ENST00000476597 RNASE13Q5GAN3 156 aaKnown RBP6.78□□□□□ -1.32
SEC13-214ENST00000476597 MRPL54Q6P161 138 aaKnown RBP6.78□□□□□ -1.32
SEC13-214ENST00000476597 CARD19Q96LW7 228 aa6.78□□□□□ -1.32
SEC13-214ENST00000476597 LINC00474Q9P2X8 69 aa6.78□□□□□ -1.32
SEC13-214ENST00000476597 PKIGQ9Y2B9 76 aa6.78□□□□□ -1.32
SEC13-214ENST00000476597 UBR4Q5T4S7 5183 aa6.77□□□□□ -1.33
SEC13-214ENST00000476597 TRAV13-1A0A0B4J241 112 aa6.77□□□□□ -1.33
SEC13-214ENST00000476597 D6R8Y8 96 aa6.77□□□□□ -1.33
SEC13-214ENST00000476597 MALP21145 153 aa6.77□□□□□ -1.33
SEC13-214ENST00000476597 Q6ZUT4 128 aa6.77□□□□□ -1.33
SEC13-214ENST00000476597 FAM104AQ969W3 186 aa6.77□□□□□ -1.33
SEC13-214ENST00000476597 SMIM2Q9BVW6 85 aa6.77□□□□□ -1.33
SEC13-214ENST00000476597 IGLV4-69A0A075B6H9 119 aa6.76□□□□□ -1.33
SEC13-214ENST00000476597 PPBPP02775 128 aa6.76□□□□□ -1.33
SEC13-214ENST00000476597 MT1HL1P0DM35 61 aa6.76□□□□□ -1.33
SEC13-214ENST00000476597 RPL39P62891 51 aaKnown RBP6.76□□□□□ -1.33
SEC13-214ENST00000476597 C5orf38Q86SI9 138 aa6.76□□□□□ -1.33
SEC13-214ENST00000476597 NPYP01303 97 aa6.75□□□□□ -1.33
SEC13-214ENST00000476597 TMEM136Q6ZRR5 245 aa6.75□□□□□ -1.33
SEC13-214ENST00000476597 ATP5L2Q7Z4Y8 100 aa6.75□□□□□ -1.33
SEC13-214ENST00000476597 C2orf48Q96LS8 159 aa6.75□□□□□ -1.33
SEC13-214ENST00000476597 APOMO95445 188 aa6.74□□□□□ -1.33
SEC13-214ENST00000476597 PTTG1IPP53801 180 aa6.74□□□□□ -1.33
SEC13-214ENST00000476597 PRR3P79522 188 aaKnown RBP6.74□□□□□ -1.33
SEC13-214ENST00000476597 MRPS36P82909 103 aaKnown RBP6.74□□□□□ -1.33
SEC13-214ENST00000476597 ORMDL3Q8N138 153 aa6.74□□□□□ -1.33
SEC13-214ENST00000476597 OPRPNQ99935 248 aaPredicted RBP6.74□□□□□ -1.33
SEC13-214ENST00000476597 SPANXA1Q9NS26 97 aa6.74□□□□□ -1.33
SEC13-214ENST00000476597 IGHV3OR16-9A0A0B4J2B5 98 aa6.73□□□□□ -1.33
SEC13-214ENST00000476597 LOC107984640A0A0U1RRK4 108 aa6.73□□□□□ -1.33
SEC13-214ENST00000476597 PRSS47A8MTI9 375 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms